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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Sun, F."

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Search Summary

This query matches 195 Structures.

Refinements

Structure Determination Methodology

experimental (195)

Scientific Name of Source Organism

	Homo sapiens (74)
	Severe acute respiratory syndrome coronavirus 2 (14)
	Mus musculus (13)
	Gallus gallus (12)
	Aspergillus terreus (7)
	African swine fever virus (6)
	Acidianus tengchongensis (5)
	Caenorhabditis elegans (5)
	Lama glama (4)
	Saccharomyces cerevisiae S288C (4)

More...

Taxonomy

	Eukaryota (130)
	Bacteria (29)
	Riboviria (25)
	Archaea (7)
	Varidnaviria (7)
	other sequences (2)
	Eukaryota (eukaryotes) (1)

Experimental Method

	X-RAY DIFFRACTION (125)
	ELECTRON MICROSCOPY (70)

Polymer Entity Type

	Protein (195)
	DNA (2)
	RNA (1)

Refinement Resolution (Å)

	1.0 - 1.5 (3)
	1.5 - 2.0 (34)
	2.0 - 2.5 (58)
	2.5 - 3.0 (32)
	3.0 - 3.5 (23)
	3.5 - 4.0 (21)
	4.0 - 4.5 (5)
	> 4.5 (19)

Release Date

	2000 - 2004 (7)
	2005 - 2009 (26)
	2010 - 2014 (51)
	2015 - 2019 (38)
	2020 - 2024 (67)
	2025 - 2029 (6)

Enzyme Classification Name

	Oxidoreductases (31)
	Transferases (30)
	Hydrolases (18)
	Isomerases (7)
	Ligases (3)
	Translocases (1)
	Lyases (3)

Membrane Protein Annotation

	PDBTM (44)
	mpstruc (31)
	MemProtMD (29)
	OPM (24)

Symmetry Type

	Asymmetric (97)
	Cyclic (53)
	Dihedral (31)
	Helical (6)
	Icosahedral (4)
	Octahedral (4)
	Tetrahedral (2)

SCOP Classification

	All alpha proteins (25)
	Alpha and beta proteins (a+b) (35)
	Small proteins (2)
	All beta proteins (17)
	Alpha and beta proteins (a/b) (14)
	Artifacts (16)
	Membrane and cell surface proteins and peptides (15)

AllSelected

1 to 25 of 195 Structures

Page 1 of 8

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1GHE \| pdb_00001ghe	Download File View File

CRYSTAL STRUCTURE OF TABTOXIN RESISTANCE PROTEIN COMPLEXED WITH AN ACYL COENZYME A

He, H., Ding, Y., Bartlam, M., Sun, F., Le, Y., Qin, X., Tang, H., Zhang, R., Joachimiak, A., Liu, Y., Zhao, N., Rao, Z.

(2003) J Mol Biology 325: 1019-1030

Released	2003-01-14
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Pseudomonas amygdali pv. tabaci
Macromolecule	ACETYLTRANSFERASE (protein)
Unique Ligands	ACO

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1J4H \| pdb_00001j4h	Download File View File

crystal structure analysis of the FKBP12 complexed with 000107 small molecule

Li, P., Ding, Y., Wang, L., Wu, B., Shu, C., Li, S., Shen, B., Rao, Z.

(2003) Biophys J 85: 3194-3201

Released	2003-06-03
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	FKBP12 (protein)
Unique Ligands	SUB

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1J4I \| pdb_00001j4i	Download File View File

crystal structure analysis of the FKBP12 complexed with 000308 small molecule

Li, P., Ding, Y., Wang, L., Wu, B., Shu, C., Li, S., Shen, B., Rao, Z.

(2003) Biophys J 85: 3194-3201

Released	2003-06-03
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	FKBP12 (protein)
Unique Ligands	TST

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1J4J \| pdb_00001j4j	Download File View File

Crystal Structure of Tabtoxin Resistance Protein (form II) complexed with an Acyl Coenzyme A

He, H., Ding, Y., Bartlam, M., Zhang, R., Duke, N., Joachimiak, A., Shao, Y., Cao, Z., Tang, H., Liu, Y., Jiang, F., Liu, J., Zhao, N., Rao, Z.

(2003) J Mol Biology 325: 1019-1030

Released	2003-06-03
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Pseudomonas amygdali pv. tabaci
Macromolecule	TABTOXIN RESISTANCE PROTEIN (protein)
Unique Ligands	ACO

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1KU5 \| pdb_00001ku5	Download File View File

Crystal Structure of recombinant histone HPhA from hyperthermophilic archaeon Pyrococcus horikoshii OT3

Li, T., Sun, F., Ji, X., Feng, Y., Rao, Z.

(2003) J Mol Biology 325: 1031-1037

Released	2003-08-26
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Pyrococcus horikoshii
Macromolecule	HPhA (protein)
Unique Ligands	ACT, SO4

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1P5T \| pdb_00001p5t	Download File View File

Crystal Structure of Dok1 PTB Domain

Shi, N., Ye, S., Liu, Y., Zhou, W., Ding, Y., Lou, Z., Qiang, B., Yuan, J., Rao, Z.

(2004) J Biological Chem 279: 4962-4969

Released	2004-02-17
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Mus musculus
Macromolecule	Docking protein 1 (protein)

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1UEF \| pdb_00001uef	Download File View File

Crystal Structure of Dok1 PTB Domain Complex

Shi, N., Ye, S., Liu, Y., Zhou, W., Ding, Y., Lou, Z., Qiang, B., Yan, J., Rao, Z.

(2004) J Biological Chem 279: 4962-4969

Released	2004-05-25
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Mus musculus
Macromolecule	13-mer peptide from Proto-oncogene tyrosine-protein kinase receptor ret (protein) Docking protein 1 (protein)

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1YQ3 \| pdb_00001yq3	Download File View File

Avian respiratory complex ii with oxaloacetate and ubiquinone

Huang, L., Cobessi, D., Tung, E.Y., Berry, E.A.

(2006) J Biological Chem 281: 5965-5972

Released	2005-12-20
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Gallus gallus
Macromolecule	SUCCINATE DEHYDROGENASE CYTOCHROME B, LARGE SUBUNIT (protein) SUCCINATE DEHYDROGENASE CYTOCHROME B, SMALL SUBUNIT (protein) Succinate dehydrogenase flavoprotein subunit (protein) succinate dehydrogenase Ip subunit (protein)
Unique Ligands	F3S, FAD, FES, GOL, HEM, JZR, PEE, SF4, TEO, UNL, UQ

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1YQ4 \| pdb_00001yq4	Download File View File

Avian respiratory complex ii with 3-nitropropionate and ubiquinone

Huang, L., Sun, G., Cobessi, D., Wang, A., Shen, J.T., Tung, E.Y., Anderson, V.E., Berry, E.A.

(2006) J Biological Chem 281: 5965-5972

Released	2005-12-20
Method	X-RAY DIFFRACTION 2.33 Å
Organisms	Gallus gallus
Macromolecule	SUCCINATE DEHYDROGENASE CYTOCHROME B, LARGE SUBUNIT (protein) SUCCINATE DEHYDROGENASE CYTOCHROME B, SMALL SUBUNIT (protein) Succinate dehydrogenase flavoprotein subunit (protein) succinate dehydrogenase Ip subunit (protein)
Unique Ligands	3NP, F3S, FAD, FES, GOL, HEM, JZR, PEE, SF4, UQ

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1ZOY \| pdb_00001zoy	Download File View File

Crystal Structure of Mitochondrial Respiratory Complex II from porcine heart at 2.4 Angstroms

Sun, F., Huo, X., Zhai, Y., Wang, A., Xu, J., Su, D., Bartlam, M., Rao, Z.

(2005) Cell 121: 1043-1057

Released	2005-07-12
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Sus scrofa
Macromolecule	FAD-binding protein (protein) Iron-sulfur protein (protein) Large cytochrome binding protein (protein) Small cytochrome binding protein (protein)
Unique Ligands	EPH, F3S, FAD, FES, HEM, SF4, UQ1

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1ZP0 \| pdb_00001zp0	Download File View File

Crystal Structure of Mitochondrial Respiratory Complex II bound with 3-nitropropionate and 2-thenoyltrifluoroacetone

Sun, F., Huo, X., Zhai, Y., Wang, A., Xu, J., Su, D., Bartlam, M., Rao, Z.

(2005) Cell 121: 1043-1057

Released	2005-07-12
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Sus scrofa
Macromolecule	FAD-binding protein (protein) Iron-sulfur protein (protein) Large cytochrome binding protein (protein) Small cytochrome binding protein (protein)
Unique Ligands	3NP, F3S, FAD, FES, HEM, SF4, TTF

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2AHM \| pdb_00002ahm	Download File View File

Crystal structure of SARS-CoV super complex of non-structural proteins: the hexadecamer

Zhai, Y.J., Sun, F., Bartlam, M., Rao, Z.

(2005) Nat Struct Mol Biol 12: 980-986

Released	2005-11-15
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Severe acute respiratory syndrome-related coronavirus
Macromolecule	Replicase polyprotein 1ab, heavy chain (protein) Replicase polyprotein 1ab, light chain (protein)
Unique Ligands	GOL, SO4

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2ESW \| pdb_00002esw	Download File View File

Atomic structure of the N-terminal SH3 domain of mouse beta PIX,p21-activated kinase (PAK)-interacting exchange factor

Rao, Z.

(2006) Biochem Biophys Res Commun 339: 407-414

Released	2006-04-11
Method	X-RAY DIFFRACTION 2.01 Å
Organisms	Mus musculus
Macromolecule	Rho guanine nucleotide exchange factor 7 (protein)
Unique Ligands	CL, HG

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2F9I \| pdb_00002f9i	Download File View File

Crystal Structure of the carboxyltransferase subunit of ACC from Staphylococcus aureus

Bilder, P.W.

(2006) Biochemistry 45: 1712-1722

Released	2006-12-05
Method	X-RAY DIFFRACTION 1.98 Å
Organisms	Staphylococcus aureus
Macromolecule	acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha (protein) acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (protein)
Unique Ligands	ZN

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2F9Y \| pdb_00002f9y	Download File View File

The Crystal Structure of The Carboxyltransferase Subunit of ACC from Escherichia coli

Bilder, P.W.

(2006) Biochemistry 45: 1712-1722

Released	2006-12-12
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Escherichia coli
Macromolecule	Acetyl-CoA carboxylase, Carboxyltransferase alpha chain (protein) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (protein)
Unique Ligands	ZN

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2FBW \| pdb_00002fbw	Download File View File

Avian respiratory complex II with carboxin bound

Huang, L.S., Sun, G., Cobessi, D., Wang, A.C., Shen, J.T., Tung, E.Y., Anderson, V.E., Berry, E.A.

(2006) J Biological Chem 281: 5965-5972

Released	2005-12-20
Method	X-RAY DIFFRACTION 2.06 Å
Organisms	Gallus gallus
Macromolecule	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial (protein) Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial (protein) Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial (protein) Succinate dehydrogenase cytochrome b560 subunit, mitochondrial (protein)
Unique Ligands	AZI, BOG, CBE, F3S, FAD, FES, GOL, HEM, K, NA, SF4, UMQ, UNL, Y3P

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2G9T \| pdb_00002g9t	Download File View File

Crystal structure of the SARS coronavirus nsp10 at 2.1A

Su, D., Lou, Z., Yang, H., Sun, F., Rao, Z.

(2006) J Virol 80: 7902-7908

Released	2006-08-15
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Severe acute respiratory syndrome-related coronavirus
Macromolecule	orf1a polyprotein (protein)
Unique Ligands	ZN

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2GA6 \| pdb_00002ga6	Download File View File

The crystal structure of SARS nsp10 without zinc ion as additive

Su, D., Lou, Z., Sun, F., Zhai, Y., Yang, H., Rao, Z.

(2006) J Virol 80: 7902-7908

Released	2006-08-15
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Severe acute respiratory syndrome-related coronavirus
Macromolecule	orf1a polyprotein (protein)
Unique Ligands	ZN

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2GTH \| pdb_00002gth	Download File View File

crystal structure of the wildtype MHV coronavirus non-structural protein nsp15

Xu, X., Zhai, Y., Sun, F., Lou, Z., Su, D., Rao, Z.

(2006) J Virol 80: 7909-7917

Released	2006-08-15
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Murine hepatitis virus strain A59
Macromolecule	Replicase polyprotein 1ab (protein)

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2GTI \| pdb_00002gti	Download File View File

mutation of MHV coronavirus non-structural protein nsp15 (F307L)

Xu, X., Zhai, Y., Sun, F., Lou, Z., Su, D., Rao, Z.

(2006) J Virol 80: 7909-7917

Released	2006-08-15
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Murine hepatitis virus strain A59
Macromolecule	Replicase polyprotein 1ab (protein)
Unique Ligands	GOL, SO4

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2H88 \| pdb_00002h88	Download File View File

Avian Mitochondrial Respiratory Complex II at 1.8 Angstrom Resolution

Huang, L.S., Shen, J.T., Wang, A.C., Berry, E.A.

Biochim Biophys Acta 1757: 1073-1083

Released	2006-06-20
Method	X-RAY DIFFRACTION 1.74 Å
Organisms	Gallus gallus
Macromolecule	SUCCINATE DEHYDROGENASE CYTOCHROME B, LARGE SUBUNIT (protein) SUCCINATE DEHYDROGENASE FLAVOPROTEIN SUBUNIT (protein) Succinate dehydrogenase Ip subunit (protein) Succinate dehydrogenase cytochrome B, small subunit (protein)
Unique Ligands	AZI, BHG, F3S, FAD, FES, GOL, HEM, K, SF4, TEO, UNL

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2H89 \| pdb_00002h89	Download File View File

Avian Respiratory Complex II with Malonate Bound

Huang, L.S., Shen, J.T., Wang, A.C., Berry, E.A.

Biochim Biophys Acta 1757: 1073-1083

Released	2006-06-20
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Gallus gallus
Macromolecule	SUCCINATE DEHYDROGENASE CYTOCHROME B, LARGE SUBUNIT (protein) SUCCINATE DEHYDROGENASE CYTOCHROME B, SMALL SUBUNIT (protein) SUCCINATE DEHYDROGENASE FLAVOPROTEIN SUBUNIT (protein) Succinate dehydrogenase Ip subunit (protein)
Unique Ligands	BHG, F3S, FAD, FES, HEM, K, MLI, PEE, SF4, UNL

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2ICJ \| pdb_00002icj	Download File View File

The crystal structure of human isopentenyl diphophate isomerase

Zheng, W., Bartlam, M., Rao, Z.

(2007) J Mol Biology 366: 1447-1458

Released	2007-03-20
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	Isopentenyl-diphosphate delta isomerase (protein)
Unique Ligands	MG, SO4

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2ICK \| pdb_00002ick	Download File View File

Human isopentenyl diphophate isomerase complexed with substrate analog

Zheng, W., Bartlam, M., Rao, Z.

(2007) J Mol Biology 366: 1447-1458

Released	2007-03-20
Method	X-RAY DIFFRACTION 1.93 Å
Organisms	Homo sapiens
Macromolecule	Isopentenyl-diphosphate delta isomerase (protein)
Unique Ligands	DMA, MN

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2R2J \| pdb_00002r2j	Download File View File

crystal structure of human ERp44

Wang, L.K., Li, S.J., Sun, F., Wang, C.C.

(2008) EMBO Rep

Released	2008-07-08
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens
Macromolecule	Thioredoxin domain-containing protein 4 (protein)
Unique Ligands	FMT, SIN

1 to 25 of 195 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1GHE | pdb_00001ghe

1J4H | pdb_00001j4h

1J4I | pdb_00001j4i

1J4J | pdb_00001j4j

1KU5 | pdb_00001ku5

1P5T | pdb_00001p5t

1UEF | pdb_00001uef

1YQ3 | pdb_00001yq3

1YQ4 | pdb_00001yq4

1ZOY | pdb_00001zoy

1ZP0 | pdb_00001zp0

2AHM | pdb_00002ahm

2ESW | pdb_00002esw

2F9I | pdb_00002f9i

2F9Y | pdb_00002f9y

2FBW | pdb_00002fbw

2G9T | pdb_00002g9t

2GA6 | pdb_00002ga6

2GTH | pdb_00002gth

2GTI | pdb_00002gti

2H88 | pdb_00002h88

2H89 | pdb_00002h89

2ICJ | pdb_00002icj

2ICK | pdb_00002ick

2R2J | pdb_00002r2j