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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Wang, W."

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Search Summary

This query matches 1,175 Structures.

Refinements

Structure Determination Methodology

experimental (1,175)

Scientific Name of Source Organism

	Homo sapiens (608)
	Severe acute respiratory syndrome coronavirus 2 (51)
	synthetic construct (36)
	Escherichia coli K-12 (33)
	Mus musculus (31)
	Aequorea victoria (22)
	Ureaplasma diversum (21)
	Bacillus paralicheniformis (20)
	Hansschlegelia zhihuaiae (19)
	Plasmodium falciparum 3D7 (18)

More...

Taxonomy

	Eukaryota (798)
	Bacteria (294)
	Riboviria (103)
	other sequences (36)
	Archaea (12)
	Duplodnaviria (11)
	Varidnaviria (11)
	Eukaryota (eukaryotes) (9)
	unclassified sequences (1)

Experimental Method

	X-RAY DIFFRACTION (933)
	ELECTRON MICROSCOPY (217)
	SOLUTION NMR (25)

Polymer Entity Type

	Protein (1,170)
	DNA (54)
	RNA (51)
	NA-hybrid (1)

Refinement Resolution (Å)

	0.5 - 1.0 (1)
	1.0 - 1.5 (63)
	1.5 - 2.0 (357)
	2.0 - 2.5 (281)
	2.5 - 3.0 (215)
	3.0 - 3.5 (149)
	3.5 - 4.0 (62)
	4.0 - 4.5 (11)
	> 4.5 (10)

Release Date

	1995 - 1999 (7)
	2000 - 2004 (35)
	2005 - 2009 (58)
	2010 - 2014 (260)
	2015 - 2019 (213)
	2020 - 2024 (478)
	2025 - 2029 (124)

Enzyme Classification Name

	Hydrolases (309)
	Transferases (259)
	Oxidoreductases (80)
	Translocases (15)
	Lyases (24)
	Isomerases (20)
	Ligases (9)

Membrane Protein Annotation

	PDBTM (98)
	mpstruc (91)
	OPM (77)
	MemProtMD (59)

Symmetry Type

	Asymmetric (756)
	Cyclic (344)
	Dihedral (63)
	Octahedral (27)
	Icosahedral (6)
	Helical (3)
	Tetrahedral (1)

SCOP Classification

	Alpha and beta proteins (a+b) (158)
	All beta proteins (102)
	Alpha and beta proteins (a/b) (131)
	Artifacts (75)
	All alpha proteins (45)
	Membrane and cell surface proteins and peptides (10)
	Multi-domain proteins (alpha and beta) (19)
	Small proteins (5)
	Coiled coil proteins (2)
	Peptides (1)

AllSelected

1 to 25 of 1,175 Structures

Page 1 of 47

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1AFF \| pdb_00001aff	Download File View File

DNA QUADRUPLEX CONTAINING GGGG TETRADS AND (T.A).A TRIADS, NMR, 8 STRUCTURES

Kettani, A., Bouaziz, S., Wang, W., Jones, R.A., Patel, D.J.

(1997) Nat Struct Biol 4: 382-389

Released	1997-08-20
Method	SOLUTION NMR
Macromolecule	QUADRUPLEX DNA (5'-D(TPAPGP*G)-3') (nucleic acid)

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1B3P \| pdb_00001b3p	Download File View File

5'-D(GPGPAPGPGPAP*T)-3'

Kettani, A., Bouaziz, S., Skripkin, E., Majumdar, A., Wang, W., Jones, R.A., Patel, D.J.

(1999) Structure 7: 803-815

Released	1999-08-31
Method	SOLUTION NMR
Macromolecule	DNA (5'-D(GPGPAPGPGPAP*T)-3') (nucleic acid)

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1D6D \| pdb_00001d6d	Download File View File

SOLUTION DNA STRUCTURE CONTAINING (A-A)-T TRIADS INTERDIGITATED BETWEEN A-T BASE PAIRS AND GGGG TETRADS; NMR, 8 STRUCT.

Kuryavyi, V.V., Kettani, A., Wang, W., Jones, R., Patel, D.J.

(2000) J Mol Biology 295: 455-469

Released	2000-01-17
Method	SOLUTION NMR
Macromolecule	5'-D(APAPGPGPTPTPTPTPAPAPGPG)-3' (nucleic acid)

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1DCH \| pdb_00001dch	Download File View File

CRYSTAL STRUCTURE OF DCOH, A BIFUNCTIONAL, PROTEIN-BINDING TRANSCRIPTION COACTIVATOR

Endrizzi, J.A., Cronk, J.D., Wang, W., Crabtree, G.R., Alber, T.

(1995) Science 268: 556-559

Released	1996-03-08
Method	X-RAY DIFFRACTION 3 Å
Organisms	Rattus norvegicus
Macromolecule	DCOH (DIMERIZATION COFACTOR OF HNF-1) (protein)
Unique Ligands	SO4

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1DCO \| pdb_00001dco	Download File View File

DCOH, A BIFUNCTIONAL PROTEIN-BINDING TRANSCRIPTIONAL COACTIVATOR

Cronk, J.D., Endrizzi, J.A., Alber, T.

(1996) Protein Sci 5: 1963-1972

Released	1996-12-07
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Rattus norvegicus
Macromolecule	DCOH (protein)

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1DCP \| pdb_00001dcp	Download File View File

DCOH, A BIFUNCTIONAL PROTEIN-BINDING TRANSCRIPTIONAL COACTIVATOR, COMPLEXED WITH BIOPTERIN

Cronk, J.D., Endrizzi, J.A., Alber, T.

(1996) Protein Sci 5: 1963-1972

Released	1996-12-07
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Rattus norvegicus
Macromolecule	DCOH (protein)
Unique Ligands	HBI

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1F03 \| pdb_00001f03	Download File View File

SOLUTION STRUCTURE OF OXIDIZED BOVINE MICROSOMAL CYTOCHROME B5 MUTANT (E44A, E48A, E56A, D60A) AND ITS INTERACTION WITH CYTOCHROME C

Wu, Y.B., Lu, J., Qian, C.M., Tang, W.X., Li, E.C., Wang, J.F., Wang, Y.H., Wang, W.H., Lu, J.X., Xie, Y., Huang, Z.X.

(2001) Eur J Biochem 268: 1620-1630

Released	2000-06-21
Method	SOLUTION NMR
Organisms	Bos taurus
Macromolecule	CYTOCHROME B5 (protein)
Unique Ligands	HEM

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1F04 \| pdb_00001f04	Download File View File

SOLUTION STRUCTURE OF OXIDIZED BOVINE MICROSOMAL CYTOCHROME B5 MUTANT (E44A, E48A, E56A, D60A) AND ITS INTERACTION WITH CYTOCHROME C

Wu, Y.B., Lu, J., Qian, C.M., Tang, W.X., Li, E.C., Wang, J.F., Wang, Y.H., Wang, W.H., Lu, J.X., Xie, Y., Huang, Z.X.

(2001) Eur J Biochem 268: 1620-1630

Released	2000-06-21
Method	SOLUTION NMR
Organisms	Bos taurus
Macromolecule	CYTOCHROME B5 (protein)
Unique Ligands	HEM

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1F5S \| pdb_00001f5s	Download File View File

CRYSTAL STRUCTURE OF PHOSPHOSERINE PHOSPHATASE FROM METHANOCOCCUS JANNASCHII

Wang, W., Kim, R., Jancarik, J., Yokota, H., Kim, S.H., Berkeley Structural Genomics Center (BSGC)

(2001) Structure 9: 65-72

Released	2001-06-20
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Methanocaldococcus jannaschii
Macromolecule	PHOSPHOSERINE PHOSPHATASE (PSP) (protein)
Unique Ligands	MG, PO4

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1FRY \| pdb_00001fry	Download File View File

THE SOLUTION STRUCTURE OF SHEEP MYELOID ANTIMICROBIAL PEPTIDE, RESIDUES 1-29 (SMAP29)

Tack, B.F., Sawai, M.V., Kearney, W.R., Robertson, A.D., Sherman, M.A., Wang, W., Hong, T., Boo, L.M., Wu, H., Waring, A.J., Lehrer, R.I.

(2002) Eur J Biochem 269: 1181-1189

Released	2002-03-08
Method	SOLUTION NMR
Organisms	Ovis aries
Macromolecule	MYELOID ANTIMICROBIAL PEPTIDE (protein)

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1G2I \| pdb_00001g2i	Download File View File

CRYSTAL STRUCTURE OF A NOVEL INTRACELLULAR PROTEASE FROM PYROCOCCUS HORIKOSHII AT 2 A RESOLUTION

Du, X., Choi, I.-G., Kim, R., Jancarik, J., Kim, S.-H., Berkeley Structural Genomics Center (BSGC)

(2000) Proc Natl Acad Sci U S A 97: 14079-14084

Released	2000-11-08
Method	X-RAY DIFFRACTION 2 Å
Organisms	Pyrococcus horikoshii
Macromolecule	PROTEASE I (protein)
Unique Ligands	SO4

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1G6M \| pdb_00001g6m	Download File View File

NMR SOLUTION STRUCTURE OF CBT2

Cheng, Y., Wang, W., Wang, J.

To be published

Released	2000-11-22
Method	SOLUTION NMR
Organisms	Naja kaouthia
Macromolecule	SHORT NEUROTOXIN 1 (protein)

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1GSO \| pdb_00001gso	Download File View File

GLYCINAMIDE RIBONUCLEOTIDE SYNTHETASE (GAR-SYN) FROM E. COLI.

Wang, W., Kappock, T.J., Stubbe, J., Ealick, S.E.

(1998) Biochemistry 37: 15647-15662

Released	1998-12-09
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Escherichia coli
Macromolecule	PROTEIN (GLYCINAMIDE RIBONUCLEOTIDE SYNTHETASE) (protein)

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1I5U \| pdb_00001i5u	Download File View File

SOLUTION STRUCTURE OF CYTOCHROME B5 TRIPLE MUTANT (E48A/E56A/D60A)

Qian, C., Yao, Y., Tang, W., Wang, J., Zhongxian, H.

(2001) Protein Sci 10: 2451-2459

Released	2001-03-21
Method	SOLUTION NMR
Organisms	Bos taurus
Macromolecule	CYTOCHROME B5 (protein)
Unique Ligands	HEM

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1ILW \| pdb_00001ilw	Download File View File

Crystal Structure of Pyrazinamidase/Nicotinamidase of Pyrococcus horikoshii

Du, X., Kim, S.-H., Berkeley Structural Genomics Center (BSGC)

(2001) Biochemistry 40: 14166-14172

Released	2001-12-12
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Pyrococcus horikoshii
Macromolecule	180 aa long hypothetical Pyrazinamidase/nicotinamidase (protein)

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1IM5 \| pdb_00001im5	Download File View File

Crystal Structure of Pyrazinamidase of Pyrococcus horikoshii in Complex with Zinc

Du, X., Kim, S.-H.

(2001) Biochemistry 40: 14166-14172

Released	2001-12-12
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Pyrococcus horikoshii
Macromolecule	180aa long hypothetical Pyrazinamidase/Nicotinamidase (protein)
Unique Ligands	ZN

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1J97 \| pdb_00001j97	Download File View File

Phospho-Aspartyl Intermediate Analogue of Phosphoserine phosphatase

Cho, H., Wang, W., Kim, R., Yokota, H., Damo, S., Kim, S.-H., Wemmer, D., Kustu, S., Yan, D., Berkeley Structural Genomics Center (BSGC)

(2001) Proc Natl Acad Sci U S A 98: 8525-8530

Released	2001-07-25
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Methanocaldococcus jannaschii
Macromolecule	Phosphoserine Phosphatase (protein)
Unique Ligands	MG, PO4

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1JE9 \| pdb_00001je9	Download File View File

NMR SOLUTION STRUCTURE OF NT2

Cheng, Y., Wang, W., Wang, J.

(2002) Biochim Biophys Acta 1594: 353-363

Released	2001-07-04
Method	SOLUTION NMR
Organisms	Naja kaouthia
Macromolecule	SHORT NEUROTOXIN II (protein)

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1KJX \| pdb_00001kjx	Download File View File

IMP Complex of E. Coli Adenylosuccinate Synthetase

Hou, Z., Wang, W., Fromm, H.J., Honzatko, R.B.

(2002) J Biological Chem 277: 5970-5976

Released	2002-03-20
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Escherichia coli K-12
Macromolecule	Adenylosuccinate Synthetase (protein)
Unique Ligands	IMP

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1KKB \| pdb_00001kkb	Download File View File

Complex of Escherichia coli Adenylosuccinate Synthetase with IMP and Hadacidin

Hou, Z., Wang, W., Fromm, H.J., Honzatko, R.B.

(2002) J Biological Chem 277: 5970-5976

Released	2002-03-20
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Escherichia coli K-12
Macromolecule	Adenylosuccinate Synthetase (protein)
Unique Ligands	HDA, IMP

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1KKF \| pdb_00001kkf	Download File View File

Complex of E. coli Adenylosuccinate Synthetase with IMP, Hadacidin, Pyrophosphate, and Mg

Hou, Z., Wang, W., Fromm, H.J., Honzatko, R.B.

(2002) J Biological Chem 277: 5970-5976

Released	2002-03-20
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Escherichia coli K-12
Macromolecule	Adenylosuccinate Synthetase (protein)
Unique Ligands	DPO, HDA, IMP, MG

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1L7M \| pdb_00001l7m	Download File View File

HIGH RESOLUTION LIGANDED STRUCTURE OF PHOSPHOSERINE PHOSPHATASE (PI COMPLEX)

Wang, W., Cho, H.S., Kim, R., Jancarik, J., Yokota, H., Nguyen, H.H., Grigoriev, I.V., Wemmer, D.E., Kim, S.H., Berkeley Structural Genomics Center (BSGC)

(2002) J Mol Biology 319: 421-431

Released	2002-04-03
Method	X-RAY DIFFRACTION 1.48 Å
Organisms	Methanocaldococcus jannaschii
Macromolecule	Phosphoserine Phosphatase (protein)
Unique Ligands	MG, PO4

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1L7N \| pdb_00001l7n	Download File View File

TRANSITION STATE ANALOGUE OF PHOSPHOSERINE PHOSPHATASE (ALUMINUM FLUORIDE COMPLEX)

Wang, W., Cho, H.S., Kim, R., Jancarik, J., Yokota, H., Nguyen, H.H., Grigoriev, I.V., Wemmer, D.E., Kim, S.H., Berkeley Structural Genomics Center (BSGC)

(2002) J Mol Biology 319: 421-431

Released	2002-06-19
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Methanocaldococcus jannaschii
Macromolecule	PHOSPHOSERINE PHOSPHATASE (protein)
Unique Ligands	AF3, ALF, MG, SO4

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1L7O \| pdb_00001l7o	Download File View File

CRYSTAL STRUCTURE OF PHOSPHOSERINE PHOSPHATASE IN APO FORM

Wang, W., Cho, H.S., Kim, R., Jancarik, J., Yokota, H., Nguyen, H.H., Grigoriev, I.V., Wemmer, D.E., Kim, S.H., Berkeley Structural Genomics Center (BSGC)

(2002) J Mol Biology 319: 421-431

Released	2002-06-19
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Methanocaldococcus jannaschii
Macromolecule	PHOSPHOSERINE PHOSPHATASE (protein)
Unique Ligands	ACY, ZN

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1L7P \| pdb_00001l7p	Download File View File

SUBSTRATE BOUND PHOSPHOSERINE PHOSPHATASE COMPLEX STRUCTURE

Wang, W., Cho, H.S., Kim, R., Jancarik, J., Yokota, H., Nguyen, H.H., Grigoriev, I.V., Wemmer, D.E., Kim, S.H., Berkeley Structural Genomics Center (BSGC)

(2002) J Mol Biology 319: 421-431

Released	2002-06-19
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Methanocaldococcus jannaschii
Macromolecule	PHOSPHOSERINE PHOSPHATASE (protein)
Unique Ligands	PO4, SEP

1 to 25 of 1,175 Structures

Page 1 of 47

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1AFF | pdb_00001aff

1B3P | pdb_00001b3p

1D6D | pdb_00001d6d

1DCH | pdb_00001dch

1DCO | pdb_00001dco

1DCP | pdb_00001dcp

1F03 | pdb_00001f03

1F04 | pdb_00001f04

1F5S | pdb_00001f5s

1FRY | pdb_00001fry

1G2I | pdb_00001g2i

1G6M | pdb_00001g6m

1GSO | pdb_00001gso

1I5U | pdb_00001i5u

1ILW | pdb_00001ilw

1IM5 | pdb_00001im5

1J97 | pdb_00001j97

1JE9 | pdb_00001je9

1KJX | pdb_00001kjx

1KKB | pdb_00001kkb

1KKF | pdb_00001kkf

1L7M | pdb_00001l7m

1L7N | pdb_00001l7n

1L7O | pdb_00001l7o

1L7P | pdb_00001l7p