RCSB PDB: Search

1LGH \| pdb_00001lgh	Download File View File

CRYSTAL STRUCTURE OF THE LIGHT-HARVESTING COMPLEX II (B800-850) FROM RHODOSPIRILLUM MOLISCHIANUM

Koepke, J., Hu, X., Schulten, K., Michel, H.

(1996) Structure 4: 581-597

Released	1997-06-05
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Magnetospirillum molischianum
Macromolecule	LIGHT HARVESTING COMPLEX II (protein)
Unique Ligands	BCL, DET, HTO, LYC

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1NWB \| pdb_00001nwb	Download File View File

Solution NMR Structure of Protein AQ_1857 from Aquifex aeolicus: Northeast Structural Genomics Consortium Target QR6.

Xu, D., Liu, G., Xiao, R., Acton, T., Montelione, G.T., Szyperski, T., Northeast Structural Genomics Consortium (NESG)

(2004) Proteins 54: 794-796

Released	2003-06-03
Method	SOLUTION NMR
Organisms	Aquifex aeolicus
Macromolecule	Hypothetical protein AQ_1857 (protein)

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1PUZ \| pdb_00001puz	Download File View File

Solution NMR Structure of Protein NMA1147 from Neisseria meningitidis. Northeast Structural Genomics Consortium Target MR19

Liu, G., Xu, D., Sukumaran, D.K., Chiang, Y., Acton, T., Montelione, G.T., Szyperski, T., Northeast Structural Genomics Consortium (NESG)

(2004) Proteins 55: 756-758

Released	2004-06-29
Method	SOLUTION NMR
Organisms	Neisseria meningitidis MC58
Macromolecule	conserved hypothetical protein (protein)

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2GZO \| pdb_00002gzo	Download File View File

NMR structure of UPF0301 PROTEIN SO3346 from Shewanella oneidensis: Northeast Structural Genomics Consortium target SOR39

Singarapu, K.K., Liu, G., Eletsky, A., Xu, D., Sukumaran, D.K., Mei, J., Xiao, R., Cunningham, K., Ma, L.C., Ritu, S., Acton, T.B., Rost, B., Montelione, G.T., Szyperski, T., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2006-06-20
Method	SOLUTION NMR
Organisms	Shewanella oneidensis
Macromolecule	UPF0301 protein SO3346 (protein)

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2HFI \| pdb_00002hfi	Download File View File

Solution NMR Structure of Protein yppE from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR213

Liu, G., Singarapu, K.K., Parish, D., Eletsky, A., Xu, D., Sukumaran, D., Ho, C.K., Fang, Y., Cunningham, K., Ma, L.-C., Xiao, R., Liu, J., Baran, M., Swapna, G.V.T., Acton, T.B., Rost, B., Montelione, G.T., Szyperski, T., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2006-07-25
Method	SOLUTION NMR
Organisms	Bacillus subtilis
Macromolecule	Hypothetical protein yppE (protein)

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2HG7 \| pdb_00002hg7	Download File View File

Solution NMR structure of Phage-like element PBSX protein xkdW, Northeast Structural Genomics Consortium Target SR355

Liu, G., Parish, D., Xu, D., Atreya, H., Sukumaran, D., Ho, C.K., Jiang, M., Cunningham, K., Ma, L.-C., Xiao, R., Liu, J., Baran, M., Swapna, G.V., Acton, T.B., Rost, B., Montelione, G.T., Szyperski, T., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2006-08-22
Method	SOLUTION NMR
Organisms	Bacillus subtilis
Macromolecule	Phage-like element PBSX protein xkdW (protein)

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2HI6 \| pdb_00002hi6	Download File View File

Solution NMR structure of UPF0107 protein AF_0055, Northeast Structural Genomics Consortium Target GR101

Liu, G., Atreya, H., Xu, D., Sukumaran, D.K., Chen, C.X., Janjua, H., Cunningham, K., Ma, L.-C., Xiao, R., Liu, J., Baran, M., Swapna, G.V.T., Acton, T.B., Rost, B., Montelione, G.T., Szyperski, T., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2006-08-29
Method	SOLUTION NMR
Organisms	Archaeoglobus fulgidus
Macromolecule	UPF0107 protein AF0055 (protein)

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2INB \| pdb_00002inb	Download File View File

Crystal structure of an XisH family protein (ZP_00107633.1) from Nostoc punctiforme PCC 73102 at 1.60 A resolution

Joint Center for Structural Genomics (JCSG)

(2014) Proteins

Released	2006-10-24
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Nostoc punctiforme PCC 73102
Macromolecule	hypothetical protein (protein)
Unique Ligands	CL, GOL

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2JPU \| pdb_00002jpu	Download File View File

solution structure of NESG target SsR10, Orf c02003 protein

Wu, Y., Singarapu, K.K., Zhang, Q., Eletski, A., Xu, D., Sukumaran, D., Parish, D., Wang, D., Jiang, M., Cunningham, K., Maglaqui, M., Owens, L., Xiao, R., Liu, J., Baran, M., Swapna, G.V.T., Acton, T., Rost, B., Montelione, G., Szyperski, T., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2007-07-03
Method	SOLUTION NMR
Organisms	Saccharolobus solfataricus
Macromolecule	Orf c02003 protein (protein)

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2JVM \| pdb_00002jvm	Download File View File

Solution NMR structure of Rhodobacter sphaeroides protein RHOS4_26430. Northeast Structural Genomics Consortium target RhR95

Eletsky, A., Sukumaran, D., Zhang, Q., Parish, D., Xu, D., Wang, H., Janjua, H., Owens, L., Xiao, R., Liu, J., Baran, M.C., Swapna, G.V.T., Acton, T.B., Rost, B., Montelione, G.T., Szyperski, T., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2007-10-16
Method	SOLUTION NMR
Organisms	Cereibacter sphaeroides 2.4.1
Macromolecule	Uncharacterized protein (protein)

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2K71 \| pdb_00002k71	Download File View File

Structure and dynamics of a DNA GNRA hairpin solved vy high-sensitivity NMR with two independent converging methods, simulated annealing (DYANA) and mesoscopic molecular modelling (BCE/AMBER)

Santini, G.P.H., Cognet, J.A.H., Xu, D., Singarapu, K.K., Herve du Penhoat, C.L.M.

(2009) J Phys Chem B 113: 6881-6893

Released	2009-07-21
Method	SOLUTION NMR
Macromolecule	5'-D(DGPDCPDGPDAPDAPDAPDGPDC)-3' (nucleic acid)

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2NLV \| pdb_00002nlv	Download File View File

CRYSTAL STRUCTURE OF A XISI-LIKE PROTEIN (AVA_3825) FROM ANABAENA VARIABILIS ATCC 29413 AT 1.30 A RESOLUTION

Joint Center for Structural Genomics (JCSG)

(2014) Proteins

Released	2006-12-05
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Trichormus variabilis ATCC 29413
Macromolecule	XisI protein-like (protein)
Unique Ligands	CL

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2NVM \| pdb_00002nvm	Download File View File

Crystal structure of fdxN element excision controlling factor XisI (YP_321976.1) from Anabaena Variabilis ATCC 29413 at 2.19 A resolution

Joint Center for Structural Genomics (JCSG)

(2014) Proteins

Released	2006-12-12
Method	X-RAY DIFFRACTION 2.19 Å
Organisms	Trichormus variabilis ATCC 29413
Macromolecule	FdxN element excision controlling factor XisI (protein)

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2NWV \| pdb_00002nwv	Download File View File

Crystal structure of XisI protein-like (YP_323822.1) from Anabaena Variabilis ATCC 29413 at 1.85 A resolution

Joint Center for Structural Genomics (JCSG)

(2014) Proteins

Released	2006-11-28
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Trichormus variabilis
Macromolecule	XisI protein-like (protein)

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2OKF \| pdb_00002okf	Download File View File

CRYSTAL STRUCTURE OF A FDXN ELEMENT EXCISION CONTROLLING FACTOR PROTEIN (AVA_3312) FROM ANABAENA VARIABILIS AT 1.60 A RESOLUTION

Joint Center for Structural Genomics (JCSG)

(2014) Proteins

Released	2007-01-30
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Trichormus variabilis
Macromolecule	FdxN element excision controlling factor protein (protein)
Unique Ligands	ACT, CL, EDO

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3BD9 \| pdb_00003bd9	Download File View File

human 3-O-sulfotransferase isoform 5 with bound PAP

Xu, D., Moon, A.F., Song, D., Liu, J., Pedersen, L.C.

(2008) Nat Chem Biol 4: 200-202

Released	2008-01-29
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Heparan sulfate glucosamine 3-O-sulfotransferase 5 (protein)
Unique Ligands	A3P

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3D7Q \| pdb_00003d7q	Download File View File

Crystal structure of a xisi-like protein (npun_ar114) from nostoc punctiforme pcc 73102 at 2.30 A resolution

Joint Center for Structural Genomics (JCSG)

(2014) Proteins

Released	2008-06-17
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Nostoc punctiforme PCC 73102
Macromolecule	XisI protein-like (protein)

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3F5F \| pdb_00003f5f	Download File View File

Crystal structure of heparan sulfate 2-O-sulfotransferase from gallus gallus as a maltose binding protein fusion.

Bethea, H.N., Xu, D., Liu, J., Pedersen, L.C.

(2008) Proc Natl Acad Sci U S A 105: 18724-18729

Released	2008-12-16
Method	X-RAY DIFFRACTION 2.65 Å
Organisms	Escherichia coli K-12 Gallus gallus
Macromolecule	Maltose-binding periplasmic protein, Heparan sulfate 2-O-sulfotransferase 1 (protein)
Unique Ligands	A3P
Unique branched monosaccharides	GLC

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3MXN \| pdb_00003mxn	Download File View File

Crystal structure of the RMI core complex

Hoadley, K.A., Xu, D., Xue, Y., Satyshur, K.A., Wang, W., Keck, J.L.

(2010) Structure 18: 1149-1158

Released	2010-09-15
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Homo sapiens
Macromolecule	RecQ-mediated genome instability protein 1 (protein) RecQ-mediated genome instability protein 2 (protein)
Unique Ligands	BEN

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3S1S \| pdb_00003s1s	Download File View File

Characterization and crystal structure of the type IIG restriction endonuclease BpuSI

Shen, B.W., Xu, D., Chan, S.-H., Zheng, Y., Zhu, Y., Xu, S.-Y., Stoddard, B.L.

(2011) Nucleic Acids Res 39: 8223-8236

Released	2011-07-13
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Bacillus pumilus
Macromolecule	restriction endonuclease BpuSI (protein)
Unique Ligands	EDO, IOD, MN, SAH

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4CGR \| pdb_00004cgr	Download File View File

Structure of Regulator Protein SCO3201 from Streptomyces coelicolor

Waack, P., Werten, S., Hinrichs, W.

(2014) Biochem Biophys Res Commun 450: 513

Released	2014-07-09
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Streptomyces coelicolor
Macromolecule	PUTATIVE TETR-FAMILY TRANSCRIPTIONAL REGULATOR (protein)
Unique Ligands	PO4

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4DBF \| pdb_00004dbf	Download File View File

Crystal structures of Cg1458

Ran, T.T., Xu, D.Q., Wang, W.W., Gao, Y.Y., Wang, M.T.

(2013) Biochem J 449: 51-60

Released	2012-11-28
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Corynebacterium glutamicum
Macromolecule	2-HYDROXYHEPTA-2,4-DIENE-1,7-DIOATE ISOMERASE (protein)
Unique Ligands	MG

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4DBH \| pdb_00004dbh	Download File View File

Crystal structure of Cg1458 with inhibitor

Ran, T.T., Wang, W.W., Xu, D.Q., Gao, Y.Y.

(2013) Biochem J 449: 51-60

Released	2012-11-28
Method	X-RAY DIFFRACTION 1.94 Å
Organisms	Corynebacterium glutamicum
Macromolecule	2-HYDROXYHEPTA-2,4-DIENE-1,7-DIOATE ISOMERASE (protein)
Unique Ligands	MG, OXL

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4FZ7 \| pdb_00004fz7	Download File View File

Crystal structure of spleen tyrosine kinase complexed with 6-((1R,2S)-2-Amino-cyclohexylamino)-4-(6-ethyl-pyridin-2-ylamino)-pyridazine-3-carboxylic acid amide

Kuglstatter, A., Slade, M.

(2014) J Med Chem 57: 2683-2691

Released	2013-07-10
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Homo sapiens
Macromolecule	Tyrosine-protein kinase SYK (protein)
Unique Ligands	0VH

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4G6G \| pdb_00004g6g	Download File View File

Crystal structure of NDH with TRT

Li, W., Feng, Y., Ge, J., Yang, M.

(2012) Nature 491: 478-482

Released	2012-10-24
Method	X-RAY DIFFRACTION 2.39 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial (protein)
Unique Ligands	FAD, MG, TRT

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1LGH | pdb_00001lgh

1NWB | pdb_00001nwb

1PUZ | pdb_00001puz

2GZO | pdb_00002gzo

2HFI | pdb_00002hfi

2HG7 | pdb_00002hg7

2HI6 | pdb_00002hi6

2INB | pdb_00002inb

2JPU | pdb_00002jpu

2JVM | pdb_00002jvm

2K71 | pdb_00002k71

2NLV | pdb_00002nlv

2NVM | pdb_00002nvm

2NWV | pdb_00002nwv

2OKF | pdb_00002okf

3BD9 | pdb_00003bd9

3D7Q | pdb_00003d7q

3F5F | pdb_00003f5f

3MXN | pdb_00003mxn

3S1S | pdb_00003s1s

4CGR | pdb_00004cgr

4DBF | pdb_00004dbf

4DBH | pdb_00004dbh

4FZ7 | pdb_00004fz7

4G6G | pdb_00004g6g