RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Chemical ID(s) = 1YN

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Chemical Attributes

Help

NOT

Count

Add Subquery

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 11 Structures.

Refinements

Structure Determination Methodology

experimental (11)

Scientific Name of Source Organism

	Saccharomyces cerevisiae YJM789 (7)
	Candida albicans SC5314 (1)
	Naegleria fowleri (1)
	Nakaseomyces glabratus CBS 138 (1)
	Saccharomyces cerevisiae S288C (1)

Taxonomy

Eukaryota (11)

Experimental Method

X-RAY DIFFRACTION (11)

Polymer Entity Type

Protein (11)

Refinement Resolution (Å)

	1.5 - 2.0 (1)
	2.0 - 2.5 (8)
	2.5 - 3.0 (2)

Release Date

	2015 - 2019 (10)
	2020 - 2024 (1)

Enzyme Classification Name

Oxidoreductases (10)

Membrane Protein Annotation

	PDBTM (10)
	MemProtMD (8)
	OPM (3)
	mpstruc (1)

Symmetry Type

Asymmetric (11)

SCOP Classification

	All alpha proteins (1)
	Artifacts (1)

AllSelected

1 to 11 of 11 Structures

Page 1 of 1

Sort by

Explore in 3D

4ZDY \| pdb_00004zdy	Download File View File

Saccharomyces cerevisiae CYP51 (Lanosterol 14-alpha demethylase) Y140F mutant complexed with itraconazole

Sagatova, A., Keniya, M.V., Wilson, R.K., Tyndall, J.D.A., Monk, B.C.

(2016) Sci Rep 6: 26213-26213

Released	2016-03-30
Method	X-RAY DIFFRACTION 2.02 Å
Organisms	Saccharomyces cerevisiae YJM789
Macromolecule	Lanosterol 14-alpha demethylase (protein)
Unique Ligands	1YN, HEM

Explore in 3D

4ZE2 \| pdb_00004ze2	Download File View File

Saccharomyces cerevisiae CYP51 (Lanosterol 14-alpha demethylase) Y140H mutant complexed with itraconazole

Sagatova, A., Keniya, M.V., Wilson, R., Monk, B.C., Tyndall, J.D.A.

(2016) Sci Rep 6: 26213-26213

Released	2016-03-30
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Saccharomyces cerevisiae YJM789
Macromolecule	Lanosterol 14-alpha demethylase (protein)
Unique Ligands	1YN, HEM

Explore in 3D

5EQB \| pdb_00005eqb	Download File View File

Crystal structure of lanosterol 14-alpha demethylase with intact transmembrane domain bound to itraconazole

Monk, B.C., Tomasiak, T.M., Keniya, M.V., Huschmann, F.U., Tyndall, J.D.A., O'Connell III, J.D., Cannon, R.D., Finer-Morre, J., Stroud, R.M., Center for Structures of Membrane Proteins (CSMP)

(2014) Proc Natl Acad Sci U S A 111: 3865-3870

Released	2016-01-13
Method	X-RAY DIFFRACTION 2.19 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Lanosterol 14-alpha demethylase (protein)
Unique Ligands	1YN, HEM

Explore in 3D

5ESG \| pdb_00005esg	Download File View File

Saccharomyces cerevisiae CYP51 (Lanosterol 14-alpha demethylase) G73E mutant complexed with itraconazole

Sagatova, A., Keniya, M.V., Wilson, R.K., Sabherwal, M., Tyndall, J.D.A., Monk, B.C.

(2018) Antimicrob Agents Chemother 62:

Released	2016-11-23
Method	X-RAY DIFFRACTION 1.981 Å
Organisms	Saccharomyces cerevisiae YJM789
Macromolecule	Lanosterol 14-alpha demethylase (protein)
Unique Ligands	1YN, HEM

Explore in 3D

5ESH \| pdb_00005esh	Download File View File

Saccharomyces cerevisiae CYP51 (Lanosterol 14-alpha demethylase) G73W mutant in complex with itraconazole

Sagatova, A., Keniya, M.V., Wilson, R.K., Sabherwal, M., Tyndall, J.D.A., Monk, B.C.

(2018) Antimicrob Agents Chemother 62:

Released	2016-11-23
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Saccharomyces cerevisiae YJM789
Macromolecule	Lanosterol 14-alpha demethylase (protein)
Unique Ligands	1YN, HEM

Explore in 3D

5ESK \| pdb_00005esk	Download File View File

Saccharomyces cerevisiae CYP51 (Lanosterol 14-alpha demethylase) G464S mutant complexed with itraconazole

Sagatova, A., Keniya, M.V., Wilson, R.K., Sabherwal, M., Tyndall, J.D.A., Monk, B.C.

(2018) Antimicrob Agents Chemother 62:

Released	2016-11-23
Method	X-RAY DIFFRACTION 2.24 Å
Organisms	Saccharomyces cerevisiae YJM789
Macromolecule	Lanosterol 14-alpha demethylase (protein)
Unique Ligands	1YN, HEM

Explore in 3D

5ESL \| pdb_00005esl	Download File View File

Saccharomyces cerevisiae CYP51 (Lanosterol 14-alpha demethylase) T322I mutant complexed with itraconazole

Sagatova, A., Keniya, M.V., Wilson, R.K., Sabherwal, M., Tyndall, J.D.A., Monk, B.C.

To be published

Released	2016-11-23
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Saccharomyces cerevisiae YJM789
Macromolecule	Lanosterol 14-alpha demethylase (protein)
Unique Ligands	1YN, HEM

Explore in 3D

5JLC \| pdb_00005jlc	Download File View File

Structure of CYP51 from the pathogen Candida glabrata

Keniya, M.V., Sabherwal, M., Wilson, R.K., Sagatova, A.A., Tyndall, J.D.A., Monk, B.C.

(2018) Antimicrob Agents Chemother 62:

Released	2016-05-25
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Nakaseomyces glabratus CBS 138
Macromolecule	Lanosterol 14-alpha demethylase (protein)
Unique Ligands	1PE, 1YN, CL, HEM, PGE

Explore in 3D

5V5Z \| pdb_00005v5z	Download File View File

Structure of CYP51 from the pathogen Candida albicans

Keniya, M.V., Sabherwal, M., Wilson, R.K., Sagatova, A.A., Tyndall, J.D.A., Monk, B.C.

(2018) Antimicrob Agents Chemother 62:

Released	2017-03-29
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Candida albicans SC5314
Macromolecule	Lanosterol 14-alpha demethylase (protein)
Unique Ligands	1YN, HEM

Explore in 3D

6AYC \| pdb_00006ayc	Download File View File

Naegleria fowleri CYP51-itraconazole complex

Debnath, A., Calvet, C.M., Jennings, G., Zhou, W., Aksenov, A., Luth, M., Abagyan, R., Nes, W.D., McKerrow, J.H., Podust, L.M.

(2017) PLoS Negl Trop Dis 11: e0006104-e0006104

Released	2017-11-22
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Naegleria fowleri
Macromolecule	Protein CYP51 (protein)
Unique Ligands	1YN, HEM

Explore in 3D

7RYA \| pdb_00007rya	Download File View File

S. CEREVISIAE CYP51 I471T MUTANT COMPLEXED WITH ITRACONAZOLE

Graham, D.O., Wilson, R.K., Ruma, Y.N., Keniya, M.V., Tyndall, J.D., Monk, B.C.

(2021) J Fungi (Basel) 7:

Released	2021-09-01
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Saccharomyces cerevisiae YJM789
Macromolecule	Lanosterol 14-alpha demethylase (protein)
Unique Ligands	1YN, HEM

1 to 11 of 11 Structures

Page 1 of 1

Sort by

About
About Us
Citing Us
Publications
Team
Careers
Usage & Privacy

Support
Contact Us
Help
Website FAQ
Glossary
Service Status

RCSB PDB is hosted by

RCSB PDB is a member of the

RCSB Partners
Nucleic Acid Knowledgebase

wwPDB Partners
RCSB PDB
PDBe
PDBj
BMRB
EMDB

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

4ZDY | pdb_00004zdy

Saccharomyces cerevisiae CYP51 (Lanosterol 14-alpha demethylase) Y140F mutant complexed with itraconazole

4ZE2 | pdb_00004ze2

Saccharomyces cerevisiae CYP51 (Lanosterol 14-alpha demethylase) Y140H mutant complexed with itraconazole

5EQB | pdb_00005eqb

Crystal structure of lanosterol 14-alpha demethylase with intact transmembrane domain bound to itraconazole

5ESG | pdb_00005esg

Saccharomyces cerevisiae CYP51 (Lanosterol 14-alpha demethylase) G73E mutant complexed with itraconazole

5ESH | pdb_00005esh

Saccharomyces cerevisiae CYP51 (Lanosterol 14-alpha demethylase) G73W mutant in complex with itraconazole

5ESK | pdb_00005esk

Saccharomyces cerevisiae CYP51 (Lanosterol 14-alpha demethylase) G464S mutant complexed with itraconazole

5ESL | pdb_00005esl

Saccharomyces cerevisiae CYP51 (Lanosterol 14-alpha demethylase) T322I mutant complexed with itraconazole

5JLC | pdb_00005jlc

Structure of CYP51 from the pathogen Candida glabrata

5V5Z | pdb_00005v5z

Structure of CYP51 from the pathogen Candida albicans

6AYC | pdb_00006ayc

Naegleria fowleri CYP51-itraconazole complex

7RYA | pdb_00007rya

S. CEREVISIAE CYP51 I471T MUTANT COMPLEXED WITH ITRACONAZOLE

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

4ZDY | pdb_00004zdy

4ZE2 | pdb_00004ze2

5EQB | pdb_00005eqb

5ESG | pdb_00005esg

5ESH | pdb_00005esh

5ESK | pdb_00005esk

5ESL | pdb_00005esl

5JLC | pdb_00005jlc

5V5Z | pdb_00005v5z

6AYC | pdb_00006ayc

7RYA | pdb_00007rya