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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Chemical ID(s) = 4BW

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Search Summary

This query matches 16 Structures.

Refinements

Structure Determination Methodology

experimental (16)

Scientific Name of Source Organism

	Homo sapiens (3)
	Bacillus phage SPO1 (1)
	Bacillus subtilis subsp. subtilis str. 168 (1)
	Flavobacteriaceae (1)
	Geobacter (1)
	Mus musculus (1)
	Nematostella vectensis (1)
	Pseudomonas phage PaP2 (1)
	Sphingobacterium faecium (1)
	Stylophora pistillata (1)

More...

Taxonomy

	Bacteria (6)
	Eukaryota (6)
	Duplodnaviria (3)
	other sequences (1)
	unclassified sequences (1)

Experimental Method

	X-RAY DIFFRACTION (14)
	ELECTRON MICROSCOPY (1)
	SOLUTION NMR (1)

Polymer Entity Type

	Protein (14)
	RNA (2)
	DNA (1)

Refinement Resolution (Å)

	1.5 - 2.0 (5)
	2.0 - 2.5 (7)
	2.5 - 3.0 (2)
	4.0 - 4.5 (1)

Release Date

	2015 - 2019 (6)
	2020 - 2024 (9)
	2025 - 2029 (1)

Enzyme Classification Name

	Hydrolases (3)
	Transferases (1)

Symmetry Type

	Dihedral (4)
	Cyclic (7)
	Asymmetric (3)

SCOP Classification

	Alpha and beta proteins (a+b) (4)
	Artifacts (2)

AllSelected

1 to 16 of 16 Structures

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4YAZ \| pdb_00004yaz	Download File View File

3',3'-cGAMP riboswitch bound with 3',3'-cGAMP

Ren, A.M., Patel, D.J., Rajashankar, R.K.

(2015) Cell Rep 11: 1-12

Released	2015-04-15
Method	X-RAY DIFFRACTION 2 Å
Organisms	Geobacter
Macromolecule	RNA (84-MER) (nucleic acid)
Unique Ligands	4BW, K, MG

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4YB1 \| pdb_00004yb1	Download File View File

20A Mutant c-di-GMP Vc2 Riboswitch bound with 3',3'-cGAMP

Ren, A.M., Patel, D.J., Rajashankar, R.K.

(2015) Cell Rep 11: 1-12

Released	2015-04-15
Method	X-RAY DIFFRACTION 2.081 Å
Organisms	Homo sapiens Vibrio cholerae
Macromolecule	U1 small nuclear ribonucleoprotein A (protein) RNA (91-MER) (nucleic acid)
Unique Ligands	4BW, MG

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5CFM \| pdb_00005cfm	Download File View File

Crystal structure of anemone STING (Nematostella vectensis) in complex with 3', 3' cGAMP, c[G(3', 5')pA(3', 5')p]

Kranzusch, P.J., Wilson, S.C., Lee, A.S.Y., Berger, J.M., Doudna, J.A., Vance, R.E.

(2015) Mol Cell 59: 891-903

Released	2015-08-26
Method	X-RAY DIFFRACTION 1.994 Å
Organisms	Nematostella vectensis
Macromolecule	Stimulator of Interferon Genes (protein)
Unique Ligands	4BW, FLC

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5VDT \| pdb_00005vdt	Download File View File

Human cyclic GMP-AMP synthase (cGAS) in complex with 3',3'-cGAMP

Byrnes, L.J., Hall, J.D.

(2017) Protein Sci 26: 2367-2380

Released	2017-09-27
Method	X-RAY DIFFRACTION 2.576 Å
Organisms	Homo sapiens
Macromolecule	Cyclic GMP-AMP synthase (protein)
Unique Ligands	4BW, ZN

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6AEL \| pdb_00006ael	Download File View File

Crystal structure of ENPP1 in complex with 3'3'-cGAMP

Kato, K., Nishimasu, H., Hirano, S., Hirano, H., Ishitani, R., Nureki, O.

(2018) Nat Commun 9: 4424-4424

Released	2019-03-06
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Mus musculus
Macromolecule	Ectonucleotide pyrophosphatase/phosphodiesterase 1, isoform CRA_d (protein)
Unique Ligands	4BW, CA, CL, EDO, NAG, ZN
Unique branched monosaccharides	MAN, NAG

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6IH7 \| pdb_00006ih7	Download File View File

Crystal structure of a standalone versatile EAL protein from Vibrio cholerae O395 - 3',3'-cGAMP bound form

Yadav, M., Pal, K., Sen, U.

(2019) Biochem J 476: 3333-3353

Released	2019-10-02
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Vibrio cholerae O395
Macromolecule	cyclic di nucleotide phoshodiesterase (protein)
Unique Ligands	4BW, CA

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6K3Y \| pdb_00006k3y	Download File View File

G-quadruplex complex with cyclic dinucleotide 3'-3' cGAMP

Winnerdy, F.R., Heddi, B., Phan, A.T.

(2019) J Am Chem Soc 141: 18038-18047

Released	2020-01-15
Method	SOLUTION NMR
Organisms	synthetic construct
Macromolecule	DNA (5'-D(TPTPGPGPTPGPGPGPTPGPGPGPTPGPGPGP*T)-3') (nucleic acid)
Unique Ligands	4BW

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6WT4 \| pdb_00006wt4	Download File View File

Structure of a bacterial STING receptor from Flavobacteriaceae sp. in complex with 3',3'-cGAMP

Morehouse, B.R., Govande, A.A., Millman, A., Keszei, A.F.A., Lowey, B., Ofir, G., Shao, S., Sorek, R., Kranzusch, P.J.

(2020) Nature 586: 429-433

Released	2020-09-09
Method	X-RAY DIFFRACTION 1.78 Å
Organisms	Flavobacteriaceae
Macromolecule	Bacterial STING (protein)
Unique Ligands	4BW, SO4

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6YDZ \| pdb_00006ydz	Download File View File

Human wtSTING in complex with 3',3'-cGAMP

Boura, E., Smola, M.

(2021) Angew Chem Int Ed Engl 60: 10172-10178

Released	2021-03-31
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens
Macromolecule	Stimulator of interferon protein (protein)
Unique Ligands	4BW

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6YJ9 \| pdb_00006yj9	Download File View File

DarB in complex with 3'3'cGAMP

Heidemann, J.L., Neumann, P., Ficner, R.

To be published

Released	2021-04-14
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Bacillus subtilis subsp. subtilis str. 168
Macromolecule	CBS domain-containing protein YkuL (protein)
Unique Ligands	4BW, CL

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7UNA \| pdb_00007una	Download File View File

SfSTING with cGAMP (masked)

Morehouse, B.R., Yip, M.C.J., Keszei, A.F.A., McNamara-Bordewick, N.K., Shao, S., Kranzusch, P.J.

(2022) Nature 608: 803-807

Released	2022-07-27
Method	ELECTRON MICROSCOPY 4 Å
Organisms	Sphingobacterium faecium
Macromolecule	CD-NTase-associated protein 12 (protein)
Unique Ligands	4BW

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7UQ2 \| pdb_00007uq2	Download File View File

Vs.4 from T4 phage in complex with cGAMP

Jenson, J.M., Chen, Z.J.

(2023) Nature 616: 326-331

Released	2023-02-08
Method	X-RAY DIFFRACTION 2 Å
Organisms	Tequatrovirus
Macromolecule	Vs.4 (protein)
Unique Ligands	4BW, CA

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8EFN \| pdb_00008efn	Download File View File

Structure of Sp-STING3 from Stylophora pistillata coral in complex with 3',3'-cGAMP

Li, Y., Slavik, K.M., Morehouse, B.R., Mears, K., Kranzusch, P.J.

(2023) Cell 186: 3261-3276.e20

Released	2023-07-05
Method	X-RAY DIFFRACTION 1.73 Å
Organisms	Stylophora pistillata
Macromolecule	Stimulator of interferon genes protein (protein)
Unique Ligands	4BW, EDO