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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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Search Summary

This query matches 1,118 Structures.

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Structure Determination Methodology

experimental (1,118)

Scientific Name of Source Organism

	Escherichia coli (68)
	Saccharomyces cerevisiae (51)
	Achromobacter xylosoxidans (50)
	Thermosynechococcus vestitus BP-1 (45)
	Bos taurus (42)
	Saccharomyces cerevisiae S288C (39)
	Blastochloris viridis (32)
	Thermostichus vulcanus (32)
	Homo sapiens (29)
	Paracoccus denitrificans PD1222 (29)

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Taxonomy

	Bacteria (802)
	Eukaryota (323)
	Archaea (3)

Experimental Method

	X-RAY DIFFRACTION (858)
	ELECTRON MICROSCOPY (181)
	SOLUTION NMR (79)
	THEORETICAL MODEL (3)

Polymer Entity Type

Protein (1,118)

Refinement Resolution (Å)

	0.5 - 1.0 (10)
	1.0 - 1.5 (130)
	1.5 - 2.0 (320)
	2.0 - 2.5 (256)
	2.5 - 3.0 (158)
	3.0 - 3.5 (86)
	3.5 - 4.0 (45)
	4.0 - 4.5 (18)
	> 4.5 (15)

Release Date

	1975 - 1979 (1)
	1980 - 1984 (4)
	1985 - 1989 (3)
	1990 - 1994 (25)
	1995 - 1999 (56)
	2000 - 2004 (136)
	2005 - 2009 (95)
	2010 - 2014 (191)
	2015 - 2019 (231)
	2020 - 2024 (360)

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Enzyme Classification Name

	Oxidoreductases (411)
	Translocases (187)
	Hydrolases (20)
	Transferases (11)

Membrane Protein Annotation

	PDBTM (245)
	mpstruc (140)
	OPM (116)
	MemProtMD (155)

Symmetry Type

	Asymmetric (616)
	Cyclic (475)
	Dihedral (56)
	Helical (7)
	Tetrahedral (5)
	Octahedral (1)

SCOP Classification

	All alpha proteins (553)
	Membrane and cell surface proteins and peptides (75)
	All beta proteins (113)
	Alpha and beta proteins (a+b) (37)
	Small proteins (34)
	Artifacts (45)
	Low resolution protein structures (5)
	Alpha and beta proteins (a/b) (10)

AllSelected

1 to 25 of 1,118 Structures

Page 1 of 45

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1A2I \| pdb_00001a2i	Download File View File

SOLUTION STRUCTURE OF DESULFOVIBRIO VULGARIS (HILDENBOROUGH) FERROCYTOCHROME C3, NMR, 20 STRUCTURES

Messias, A.C., Kastrau, D.H.K., Costa, H.S., Legall, J., Turner, D.L., Santos, H., Xavier, A.V.

(1998) J Mol Biology 281: 719-739

Released	1998-07-08
Method	SOLUTION NMR
Organisms	Nitratidesulfovibrio vulgaris str. Hildenborough
Macromolecule	CYTOCHROME C3 (protein)
Unique Ligands	HEC

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1A2S \| pdb_00001a2s	Download File View File

THE SOLUTION NMR STRUCTURE OF OXIDIZED CYTOCHROME C6 FROM THE GREEN ALGA MONORAPHIDIUM BRAUNII, MINIMIZED AVERAGE STRUCTURE

Banci, L., Bertini, I., De La Rosa, M.A., Koulougliotis, D., Navarro, J.A., Walter, O.

(1998) Biochemistry 37: 4831-4843

Released	1998-04-29
Method	SOLUTION NMR
Organisms	Chlorolobion braunii
Macromolecule	CYTOCHROME C6 (protein)
Unique Ligands	HEC

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1A56 \| pdb_00001a56	Download File View File

PRIMARY SEQUENCE AND SOLUTION CONFORMATION OF FERRICYTOCHROME C-552 FROM NITROSOMONAS EUROPAEA, NMR, MEAN STRUCTURE REFINED WITH EXPLICIT HYDROGEN BOND CONSTRAINTS

Timkovich, R., Bergmann, D., Arciero, D.M., Hooper, A.B.

(1998) Biophys J 75: 1964-1972

Released	1998-10-21
Method	SOLUTION NMR
Organisms	Nitrosomonas europaea
Macromolecule	FERRICYTOCHROME C-552 (protein)
Unique Ligands	HEC

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1A8C \| pdb_00001a8c	Download File View File

PRIMARY SEQUENCE AND SOLUTION CONFORMATION OF FERROCYTOCHROME C-552 FROM NITROSOMONAS EUROPAEA, NMR, MEAN STRUCTURE REFINED WITHOUT HYDROGEN BOND CONSTRAINTS

Timkovich, R., Bergmann, D., Arciero, D.M., Hooper, A.B.

(1998) Biophys J 75: 1964-1972

Released	1998-10-21
Method	SOLUTION NMR
Organisms	Nitrosomonas europaea
Macromolecule	FERROCYTOCHROME C-552 (protein)
Unique Ligands	HEC

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1AKK \| pdb_00001akk	Download File View File

SOLUTION STRUCTURE OF OXIDIZED HORSE HEART CYTOCHROME C, NMR, MINIMIZED AVERAGE STRUCTURE

Banci, L., Bertini, I., Gray, H.B., Luchinat, C., Reddig, T., Rosato, A., Turano, P.

(1997) Biochemistry 36: 9867-9877

Released	1997-09-17
Method	SOLUTION NMR
Organisms	Equus caballus
Macromolecule	CYTOCHROME C (protein)
Unique Ligands	HEC

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1AYG \| pdb_00001ayg	Download File View File

SOLUTION STRUCTURE OF CYTOCHROME C-552, NMR, 20 STRUCTURES

Hasegawa, J., Yoshida, T., Yamazaki, T., Sambongi, Y., Yu, Y., Igarashi, Y., Kodama, T., Yamazaki, K., Hakusui, H., Kyogoku, Y., Kobayashi, Y.

(1998) Biochemistry 37: 9641-9649

Released	1998-11-25
Method	SOLUTION NMR
Organisms	Hydrogenobacter thermophilus
Macromolecule	CYTOCHROME C-552 (protein)
Unique Ligands	HEC

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1B7V \| pdb_00001b7v	Download File View File

Structure of the C-553 cytochrome from Bacillus pasteruii to 1.7 A resolution

Gonzalez, A., Benini, S., Rypniewski, W.R., Wilson, K.S., Ciurli, S.

(2000) Biochemistry 39: 13115-13126

Released	2000-03-27
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Sporosarcina pasteurii
Macromolecule	PROTEIN (CYTOCHROME C-553) (protein)
Unique Ligands	HEC

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1BBH \| pdb_00001bbh	Download File View File

ATOMIC STRUCTURE OF A CYTOCHROME C' WITH AN UNUSUAL LIGAND-CONTROLLED DIMER DISSOCIATION AT 1.8 ANGSTROMS RESOLUTION

Ren, Z., Mcree, D.E.

(1993) J Mol Biology 234: 433-445

Released	1994-01-31
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Allochromatium vinosum
Macromolecule	CYTOCHROME C' (protein)
Unique Ligands	HEC

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1BE3 \| pdb_00001be3	Download File View File

CYTOCHROME BC1 COMPLEX FROM BOVINE

Iwata, S., Lee, J.W., Okada, K., Lee, J.K., Iwata, M., Ramaswamy, S., Jap, B.K.

(1998) Science 281: 64-71

Released	1999-01-13
Method	X-RAY DIFFRACTION 3 Å
Organisms	Bos taurus
Macromolecule	Unique protein chains: 11
Unique Ligands	FES, HEC, HEM

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1BGY \| pdb_00001bgy	Download File View File

CYTOCHROME BC1 COMPLEX FROM BOVINE

Iwata, S., Lee, J.W., Okada, K., Lee, J.K., Iwata, M., Ramaswamy, S., Jap, B.K.

(1998) Science 281: 64-71

Released	1999-01-06
Method	X-RAY DIFFRACTION 3 Å
Organisms	Bos taurus
Macromolecule	Unique protein chains: 11
Unique Ligands	FES, HEC, HEM

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1BL9 \| pdb_00001bl9	Download File View File

CONFORMATIONAL CHANGES OCCURRING UPON REDUCTION IN NITRITE REDUCTASE FROM PSEUDOMONAS AERUGINOSA

Nurizzo, D., Cambillau, C., Tegoni, M.

(1998) Biochemistry 37: 13987-13996

Released	1999-04-27
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	NITRITE REDUCTASE (protein)
Unique Ligands	DHE, HEC, OH

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1C2N \| pdb_00001c2n	Download File View File

CYTOCHROME C2, NMR, 20 STRUCTURES

Cordier, F., Caffrey, M.S., Brutscher, B., Cusanovich, M.A., Marion, D., Blackledge, M.

(1998) J Mol Biology 281: 341-361

Released	1999-03-23
Method	SOLUTION NMR
Organisms	Rhodobacter capsulatus SB 1003
Macromolecule	CYTOCHROME C2 (protein)
Unique Ligands	HEC

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1C2R \| pdb_00001c2r	Download File View File

MOLECULAR STRUCTURE OF CYTOCHROME C2 ISOLATED FROM RHODOBACTER CAPSULATUS DETERMINED AT 2.5 ANGSTROMS RESOLUTION

Benning, M.M., Wesenberg, G., Caffrey, M.S., Bartsch, R.G., Meyer, T.E., Cusanovich, M.A., Rayment, I., Holden, H.M.

(1991) J Mol Biology 220: 673-685

Released	1992-01-15
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Rhodobacter capsulatus
Macromolecule	CYTOCHROME C2 (protein)
Unique Ligands	HEC

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1C6S \| pdb_00001c6s	Download File View File

THE SOLUTION STRUCTURE OF CYTOCHROME C6 FROM THE THERMOPHILIC CYANOBACTERIUM SYNECHOCOCCUS ELONGATUS, NMR, 20 STRUCTURES

Roesch, P., Beissinger, M., Sticht, H., Sutter, M., Ejchart, A., Haehnel, W.

(1998) EMBO J 17: 27-36

Released	1998-04-08
Method	SOLUTION NMR
Organisms	Synechococcus elongatus
Macromolecule	CYTOCHROME C6 (protein)
Unique Ligands	HEC

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1C75 \| pdb_00001c75	Download File View File

0.97 A "AB INITIO" CRYSTAL STRUCTURE OF CYTOCHROME C-553 FROM BACILLUS PASTEURII

Benini, S., Ciurli, S., Rypniewski, W.R., Wilson, K.S.

(2000) Biochemistry 39: 13115-13126

Released	2000-03-22
Method	X-RAY DIFFRACTION 0.97 Å
Organisms	Sporosarcina pasteurii
Macromolecule	CYTOCHROME C-553 (protein)
Unique Ligands	HEC

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1C7M \| pdb_00001c7m	Download File View File

SOLUTION STRUCTURE OF THE FUNCTIONAL DOMAIN OF PARACOCCUS DENITRIFICANS CYTOCHROME C552 IN THE REDUCED STATE

Pristovsek, P., Luecke, C., Reincke, B., Ludwig, B., Rueterjans, H.

(2000) Eur J Biochem 267: 4205-4212

Released	2000-07-19
Method	SOLUTION NMR
Organisms	Paracoccus denitrificans
Macromolecule	PROTEIN (CYTOCHROME C552) (protein)
Unique Ligands	HEC

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1CCH \| pdb_00001cch	Download File View File

THE SOLUTION CONFORMATION OF CYTOCHROME C-551 FROM P.STUTZERI ZOBELL DETERMINED BY NMR+

Cai, M., Timkovich, R.

(1992) Biochemistry 31: 8603-8612

Released	1994-04-30
Method	SOLUTION NMR
Organisms	Stutzerimonas stutzeri
Macromolecule	CYTOCHROME C551 (protein)
Unique Ligands	HEC

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1CCR \| pdb_00001ccr	Download File View File

STRUCTURE OF RICE FERRICYTOCHROME C AT 2.0 ANGSTROMS RESOLUTION

Ochi, H., Hata, Y., Tanaka, N., Kakudo, M., Sakurai, T., Aihara, S., Morita, Y.

(1983) J Mol Biology 166: 407-418

Released	1983-04-21
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Oryza sativa
Macromolecule	CYTOCHROME C (protein)
Unique Ligands	HEC

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1CGN \| pdb_00001cgn	Download File View File

CYTOCHROME C'

Dobbs, A.J., Faber, H.R., Anderson, B.F., Baker, E.N.

(1996) Acta Crystallogr D Biol Crystallogr 52: 356-368

Released	1995-07-31
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	CYTOCHROME C (protein)
Unique Ligands	HEC

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1CGO \| pdb_00001cgo	Download File View File

CYTOCHROME C'

Dobbs, A.J., Faber, H.R., Anderson, B.F., Baker, E.N.

(1996) Acta Crystallogr D Biol Crystallogr 52: 356-368

Released	1995-07-31
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Alcaligenes sp.
Macromolecule	CYTOCHROME C (protein)
Unique Ligands	HEC

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1CHH \| pdb_00001chh	Download File View File

STRUCTURAL STUDIES OF THE ROLES OF RESIDUES 82 AND 85 AT THE INTERACTIVE FACE OF CYTOCHROME C

Lo, T.P., Brayer, G.D.

(1995) Biochemistry 34: 163-171

Released	1994-12-20
Method	X-RAY DIFFRACTION 1.97 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	CYTOCHROME C (protein)
Unique Ligands	HEC, SO4

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1CHI \| pdb_00001chi	Download File View File

STRUCTURAL STUDIES OF THE ROLES OF RESIDUES 82 AND 85 AT THE INTERACTIVE FACE OF CYTOCHROME C

Lo, T.P., Brayer, G.D.

(1995) Biochemistry 34: 163-171

Released	1994-12-20
Method	X-RAY DIFFRACTION 2 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	CYTOCHROME C (protein)
Unique Ligands	HEC, SO4

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1CHJ \| pdb_00001chj	Download File View File

STRUCTURAL STUDIES OF THE ROLES OF RESIDUES 82 AND 85 AT THE INTERACTIVE FACE OF CYTOCHROME C

Lo, T.P., Brayer, G.D.

(1995) Biochemistry 34: 163-171

Released	1994-12-20
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	CYTOCHROME C (protein)
Unique Ligands	HEC, SO4

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1CI3 \| pdb_00001ci3	Download File View File

CYTOCHROME F FROM THE B6F COMPLEX OF PHORMIDIUM LAMINOSUM

Carrell, C.J., Schlarb, B.G., Howe, C.J., Bendall, D.S., Cramer, W.A., Smith, J.L.

(1999) Biochemistry 38: 9590-9599

Released	1999-08-11
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Leptolyngbya laminosa
Macromolecule	PROTEIN (CYTOCHROME F) (protein)
Unique Ligands	HEC, ZN

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1CIE \| pdb_00001cie	Download File View File

STRUCTURAL AND FUNCTIONAL EFFECTS OF MULTIPLE MUTATIONS AT DISTAL SITES IN CYTOCHROME C

Lo, T.P., Brayer, G.D.

(1995) Biochemistry 34: 5259-5268

Released	1995-01-26
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	CYTOCHROME C (protein)
Unique Ligands	HEC, SO4

1 to 25 of 1,118 Structures

Page 1 of 45

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1A2I | pdb_00001a2i

1A2S | pdb_00001a2s

1A56 | pdb_00001a56

1A8C | pdb_00001a8c

1AKK | pdb_00001akk

1AYG | pdb_00001ayg

1B7V | pdb_00001b7v

1BBH | pdb_00001bbh

1BE3 | pdb_00001be3

1BGY | pdb_00001bgy

1BL9 | pdb_00001bl9

1C2N | pdb_00001c2n

1C2R | pdb_00001c2r

1C6S | pdb_00001c6s

1C75 | pdb_00001c75

1C7M | pdb_00001c7m

1CCH | pdb_00001cch

1CCR | pdb_00001ccr

1CGN | pdb_00001cgn

1CGO | pdb_00001cgo

1CHH | pdb_00001chh

1CHI | pdb_00001chi

1CHJ | pdb_00001chj

1CI3 | pdb_00001ci3

1CIE | pdb_00001cie