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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Chemical ID(s) = NO2

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Search Summary

This query matches 184 Structures.

Refinements

Structure Determination Methodology

experimental (184)

Scientific Name of Source Organism

	Achromobacter cycloclastes (37)
	Alcaligenes faecalis (17)
	Bradyrhizobium sp. ORS 375 (14)
	Equus caballus (13)
	Physeter macrocephalus (10)
	Bradyrhizobium diazoefficiens USDA 110 (8)
	Homo sapiens (8)
	Achromobacter xylosoxidans (7)
	Bradyrhizobium sp. (7)
	Cyanothece sp. PCC 7425 (4)

More...

Taxonomy

	Bacteria (126)
	Eukaryota (54)
	Riboviria (3)
	Archaea (2)

Experimental Method

X-RAY DIFFRACTION (184)

Polymer Entity Type

Protein (184)

Refinement Resolution (Å)

	0.5 - 1.0 (2)
	1.0 - 1.5 (54)
	1.5 - 2.0 (97)
	2.0 - 2.5 (22)
	2.5 - 3.0 (5)
	3.0 - 3.5 (4)

Release Date

	1995 - 1999 (6)
	2000 - 2004 (12)
	2005 - 2009 (20)
	2010 - 2014 (43)
	2015 - 2019 (59)
	2020 - 2024 (44)

Enzyme Classification Name

	Oxidoreductases (158)
	Hydrolases (10)
	Lyases (4)
	Transferases (1)

Membrane Protein Annotation

	MemProtMD (1)
	PDBTM (1)
	mpstruc (1)

Symmetry Type

	Cyclic (121)
	Asymmetric (58)
	Dihedral (10)

SCOP Classification

	All beta proteins (81)
	All alpha proteins (34)
	Alpha and beta proteins (a+b) (13)
	Artifacts (6)
	Alpha and beta proteins (a/b) (5)
	Multi-domain proteins (alpha and beta) (1)

AllSelected

1 to 25 of 184 Structures

Page 1 of 8

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1AS6 \| pdb_00001as6	Download File View File

STRUCTURE OF NITRITE BOUND TO OXIDIZED ALCALIGENES FAECALIS NITRITE REDUCTASE AT CRYO TEMPERATURE

Murphy, M.E.P., Adman, E.T., Turley, S.

(1997) J Biological Chem 272: 28455-28460

Released	1998-02-25
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Alcaligenes faecalis
Macromolecule	NITRITE REDUCTASE (protein)
Unique Ligands	CU, NO2

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1AS8 \| pdb_00001as8	Download File View File

STRUCTURE OF NITRITE BOUND TO REDUCED ALCALIGENES FAECALIS NITRITE REDUCTASE AT CRYO TEMPERATURE

Murphy, M.E.P., Adman, E.T., Turley, S.

(1997) J Biological Chem 272: 28455-28460

Released	1998-02-25
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Alcaligenes faecalis
Macromolecule	NITRITE REDUCTASE (protein)
Unique Ligands	CU, NO2

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1FDI \| pdb_00001fdi	Download File View File

OXIDIZED FORM OF FORMATE DEHYDROGENASE H FROM E. COLI COMPLEXED WITH THE INHIBITOR NITRITE

Sun, P.D., Boyington, J.C.

(1997) Science 275: 1305-1308

Released	1997-08-20
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Escherichia coli
Macromolecule	FORMATE DEHYDROGENASE H (protein)
Unique Ligands	6MO, MGD, NO2, SF4

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1J9Q \| pdb_00001j9q	Download File View File

Crystal structure of nitrite soaked oxidized D98N AFNIR

Boulanger, M.J., Murphy, M.E.

(2001) Biochemistry 40: 9132-9141

Released	2001-06-06
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Alcaligenes faecalis
Macromolecule	COPPER-CONTAINING NITRITE REDUCTASE (protein)
Unique Ligands	CU, NO2

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1J9R \| pdb_00001j9r	Download File View File

Crystal structure of nitrite soaked reduced D98N AFNIR

Boulanger, M.J., Murphy, M.E.

(2001) Biochemistry 40: 9132-9141

Released	2001-06-06
Method	X-RAY DIFFRACTION 2 Å
Organisms	Alcaligenes faecalis
Macromolecule	COPPER-CONTAINING NITRITE REDUCTASE (protein)
Unique Ligands	CU, NO2

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1J9S \| pdb_00001j9s	Download File View File

Crystal structure of nitrite soaked oxidized H255N AFNIR

Boulanger, M.J., Murphy, M.E.

(2001) Biochemistry 40: 9132-9141

Released	2001-06-06
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Alcaligenes faecalis
Macromolecule	COPPER-CONTAINING NITRITE REDUCTASE (protein)
Unique Ligands	CU, NO2

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1J9T \| pdb_00001j9t	Download File View File

Crystal structure of nitrite soaked reduced H255N AFNIR

Boulanger, M.J., Murphy, M.E.

(2001) Biochemistry 40: 9132-9141

Released	2001-06-06
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Alcaligenes faecalis
Macromolecule	COPPER-CONTAINING NITRITE REDUCTASE (protein)
Unique Ligands	CU, NO2

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1KBV \| pdb_00001kbv	Download File View File

NITRITE-SOAKED CRYSTAL STRUCTURE OF THE SOLUBLE DOMAIN OF ANIA FROM NEISSERIA GONORRHOEAE

Boulanger, M.J., Murphy, M.E.P.

(2002) J Mol Biology 315: 1111-1127

Released	2001-12-05
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Neisseria gonorrhoeae
Macromolecule	Major outer membrane protein PAN 1 (protein)
Unique Ligands	CU, NO2

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1L9O \| pdb_00001l9o	Download File View File

CRYSTAL STRUCTURE OF NITRITE SOAKED I257A VARIANT OF THE COPPER-CONTAINING NITRITE REDUCTASE FROM ALCALIGENES FAECALIS

Boulanger, M.J., Murphy, M.E.P.

(2003) Protein Sci 12: 248-256

Released	2003-02-04
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Alcaligenes faecalis
Macromolecule	COPPER-CONTAINING NITRITE REDUCTASE (protein)
Unique Ligands	CU, NO2

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1L9P \| pdb_00001l9p	Download File View File

CRYSTAL STRUCTURE OF NITRITE SOAKED I257G VARIANT OF THE COPPER-CONTAINING NITRITE REDUCTASE FROM ALCALIGENES FAECALIES S-6

Boulanger, M.J., Murphy, M.E.P.

(2003) Protein Sci 12: 248-256

Released	2003-02-04
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Alcaligenes faecalis
Macromolecule	COPPER-CONTAINING NITRITE REDUCTASE (protein)
Unique Ligands	CU, NO2

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1L9Q \| pdb_00001l9q	Download File View File

CRYSTAL STRUCTURE OF THE I257L VARIANT OF THE COPPER-CONTAINING NITRITE REDUCTASE FROM ALCALIGENES FAECALIS S-6

Boulanger, M.J., Murphy, M.E.P.

(2003) Protein Sci 12: 248-256

Released	2003-02-04
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Alcaligenes faecalis
Macromolecule	COPPER-CONTAINING NITRITE REDUCTASE (protein)
Unique Ligands	CU, NO2

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1L9R \| pdb_00001l9r	Download File View File

CRYSTAL STRUCTURE OF THE I257M VARIANT OF THE COPPER-CONTAINING NITRITE REDUCTASE FROM ALCALIGENES FAECALIS S-6

Boulanger, M.J., Murphy, M.E.P.

(2003) Protein Sci 12: 248-256

Released	2003-02-04
Method	X-RAY DIFFRACTION 1.78 Å
Organisms	Alcaligenes faecalis
Macromolecule	COPPER-CONTAINING NITRITE REDUCTASE (protein)
Unique Ligands	CU, NO2

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1L9S \| pdb_00001l9s	Download File View File

CRYSTAL STRUCTURE OF THE I257T VARIANT OF THE COPPER-CONTAINING NITRITE REDUCTASE FROM ALCALIGENES FAECALIS S-6

Boulanger, M.J., Murphy, M.E.P.

(2003) Protein Sci 12: 248-256

Released	2003-02-04
Method	X-RAY DIFFRACTION 1.78 Å
Organisms	Alcaligenes faecalis
Macromolecule	COPPER-CONTAINING NITRITE REDUCTASE (protein)
Unique Ligands	CU, NO2

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1L9T \| pdb_00001l9t	Download File View File

CRYSTAL STRUCTURE OF THE I257V VARIANT OF THE COPPER-CONTAINING NITRITE REDUCTASE FROM ALCALIGENES FAECALIS S-6

Boulanger, M.J., Murphy, M.E.P.

(2003) Protein Sci 12: 248-256

Released	2003-02-04
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Alcaligenes faecalis
Macromolecule	COPPER-CONTAINING NITRITE REDUCTASE (protein)
Unique Ligands	CU, NO2

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1NDS \| pdb_00001nds	Download File View File

CRYSTALLOGRAPHIC STRUCTURE OF A SUBSTRATE BOUND BLUE COPPER NITRITE REDUCTASE FROM ALCALIGENES XYLOSOXIDANS

Dodd, F.E., Hasnain, S.S., Abraham, Z.H.L., Eady, R.R., Smith, B.E.

(1997) Acta Crystallogr D Biol Crystallogr 53: 406-418

Released	1997-07-07
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	NITRITE REDUCTASE (protein)
Unique Ligands	CU, NO2

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1NID \| pdb_00001nid	Download File View File

THE STRUCTURE OF CU-NITRITE REDUCTASE FROM ACHROMOBACTER CYCLOCLASTES AT FIVE PH VALUES, WITH NITRITE BOUND AND WITH TYPE II CU DEPLETED

Adman, E.T., Godden, J.W., Turley, S.

(1995) J Biological Chem 270: 27458-27474

Released	1995-12-07
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Achromobacter cycloclastes
Macromolecule	NITRITE REDUCTASE (protein)
Unique Ligands	CU, NO2

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1SJM \| pdb_00001sjm	Download File View File

Nitrite bound copper containing nitrite reductase

Tocheva, E.I., Rosell, F.I., Mauk, A.G., Murphy, M.E.P.

(2004) Science 304: 867-870

Released	2004-06-22
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Alcaligenes faecalis
Macromolecule	Copper-containing nitrite reductase (protein)
Unique Ligands	ACT, CU, NO2, TRS

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1WA2 \| pdb_00001wa2	Download File View File

Crystal Structure Of H313Q Mutant Of Alcaligenes Xylosoxidans Nitrite Reductase with nitrite bound

Barrett, M.L., Harris, R.L., Antonyuk, S.V., Strange, R.W., Hough, M.A., Eady, R.R., Sawers, G., Hasnain, S.S.

(2004) Biochemistry 43: 16311

Released	2005-01-04
Method	X-RAY DIFFRACTION 1.72 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE, (protein)
Unique Ligands	CU, MES, NO2, SO4, ZN

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2BWD \| pdb_00002bwd	Download File View File

Atomic Resolution Structure of Achromobacter cycloclastes Cu Nitrite Reductase with Endogenously bound Nitrite and NO

Antonyuk, S.V., Strange, R.W., Sawers, G., Eady, R.R., Hasnain, S.S.

(2005) Proc Natl Acad Sci U S A 102: 12041

Released	2005-08-17
Method	X-RAY DIFFRACTION 1.15 Å
Organisms	Achromobacter cycloclastes
Macromolecule	COPPER-CONTAINING NITRITE REDUCTASE (protein)
Unique Ligands	ACT, CU, HOA, MLI, NO2

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2BWI \| pdb_00002bwi	Download File View File

Atomic Resolution Structure of Nitrite -soaked Achromobacter cycloclastes Cu Nitrite Reductase

Antonyuk, S.V., Strange, R.W., Sawers, G., Eady, R.R., Hasnain, S.S.

(2005) Proc Natl Acad Sci U S A 102: 12041

Released	2005-08-17
Method	X-RAY DIFFRACTION 1.1 Å
Organisms	Achromobacter cycloclastes
Macromolecule	COPPER-CONTAINING NITRITE REDUCTASE (protein)
Unique Ligands	ACT, CU, MLI, NO2

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2DWS \| pdb_00002dws	Download File View File

Cu-containing nitrite reductase at pH 8.4 with bound nitrite

Jacobson, F.

(2007) J Biological Chem 282: 6347-6355

Released	2006-12-05
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Cereibacter sphaeroides
Macromolecule	Copper-containing nitrite reductase (protein)
Unique Ligands	CU, NO2

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2DWT \| pdb_00002dwt	Download File View File

Cu-containing nitrite reductase at pH 6.0 with bound nitrite

Jacobson, F.

(2007) J Biological Chem 282: 6347-6355

Released	2006-12-05
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Cereibacter sphaeroides
Macromolecule	Copper-containing nitrite reductase (protein)
Unique Ligands	CU, NO2

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2E80 \| pdb_00002e80	Download File View File

Cytochrome c Nitrite Reductase from Wolinella succinogenes with bound substrate nitrite

Einsle, O., Kroneck, P.M.H.

(2002) J Am Chem Soc 124: 11737-11745

Released	2007-01-30
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Wolinella succinogenes DSM 1740
Macromolecule	Cytochrome c-552 (protein)
Unique Ligands	ACT, CA, HEM, NO2, YT3