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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Gene Name = "NALP1"

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Search Summary

This query matches 11 Structures.

Refinements

Structure Determination Methodology

experimental (11)

Scientific Name of Source Organism

	Homo sapiens (11)
	Escherichia coli K-12 (1)
	Spodoptera frugiperda (1)

Taxonomy

	Eukaryota (11)
	Bacteria (1)

Experimental Method

	ELECTRON MICROSCOPY (5)
	X-RAY DIFFRACTION (5)
	SOLUTION NMR (1)

Polymer Entity Type

Protein (11)

Refinement Resolution (Å)

	1.5 - 2.0 (2)
	2.0 - 2.5 (2)
	2.5 - 3.0 (1)
	3.0 - 3.5 (2)
	3.5 - 4.0 (3)

Release Date

	2000 - 2004 (1)
	2005 - 2009 (1)
	2010 - 2014 (2)
	2015 - 2019 (1)
	2020 - 2024 (6)

Enzyme Classification Name

Hydrolases (11)

Symmetry Type

	Asymmetric (8)
	Cyclic (3)
	Helical (2)

SCOP Classification

All alpha proteins (1)

AllSelected

1 to 11 of 11 Structures

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1PN5 \| pdb_00001pn5	Download File View File

NMR structure of the NALP1 Pyrin domain (PYD)

Hiller, S., Kohl, A., Fiorito, F., Herrmann, T., Wider, G., Tschopp, J., Grutter, M.G., Wuthrich, K.

(2003) Structure 11: 1199-1205

Released	2003-10-07
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	NACHT-, LRR- and PYD-containing protein 2 (protein)

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3KAT \| pdb_00003kat	Download File View File

Crystal Structure of the CARD domain of the human NLRP1 protein, Northeast Structural Genomics Consortium Target HR3486E

Forouhar, F., Abashidze, M., Seetharaman, J., Mao, M., Xiao, R., Ciccosanti, C., Shastry, R., Everett, J.K., Nair, R., Acton, T.B., Rost, B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2009-10-27
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Homo sapiens
Macromolecule	NACHT, LRR and PYD domains-containing protein 1 (protein)

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4IFP \| pdb_00004ifp	Download File View File

X-ray Crystal Structure of Human NLRP1 CARD Domain

Jin, T., Curry, J., Smith, P., Jiang, J., Xiao, T.

(2013) Proteins 81: 1266-1270

Released	2013-04-03
Method	X-RAY DIFFRACTION 1.9948 Å
Organisms	Escherichia coli K-12 Homo sapiens
Macromolecule	Maltose-binding periplasmic protein,NACHT, LRR and PYD domains-containing protein 1 (protein)
Unique Ligands	MLI
Unique branched monosaccharides	GLC

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4IM6 \| pdb_00004im6	Download File View File

LRR domain from human NLRP1

Hahne, G., Reubold, T.F., Eschenburg, S.

(2014) FEBS Lett 588: 3327-3332

Released	2014-01-08
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Homo sapiens
Macromolecule	NACHT, LRR and PYD domains-containing protein 1 (protein)
Unique Ligands	GOL

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5Y3S \| pdb_00005y3s	Download File View File

Crystal structure of human NLRP1 leucine rich repeat domain

Jin, T., Xiao, T.S.

To be published

Released	2018-08-01
Method	X-RAY DIFFRACTION 2.451 Å
Organisms	Homo sapiens
Macromolecule	NACHT, LRR and PYD domains-containing protein 1 (protein)
Unique Ligands	NA, PO4

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6K7V \| pdb_00006k7v	Download File View File

Structure of NLRP1 CARD filament

Gong, Q., Xu, C., Zhang, J., Wu, B.

(2021) Nat Commun 12: 188-188

Released	2020-09-16
Method	ELECTRON MICROSCOPY 3.7 Å
Organisms	Homo sapiens
Macromolecule	NACHT, LRR and PYD domains-containing protein 1 (protein)

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6X6A \| pdb_00006x6a	Download File View File

Cryo-EM structure of NLRP1-DPP9 complex

Hollingsworth, L.R., Sharif, H., Griswold, A.R., Fontana, P., Mintseris, J., Dagbay, K.B., Paulo, J.A., Gygi, S.P., Bachovchin, D.A., Wu, H.

(2021) Nature 592: 778-783

Released	2021-03-10
Method	ELECTRON MICROSCOPY 3.6 Å
Organisms	Homo sapiens
Macromolecule	Dipeptidyl peptidase 9 (protein) NACHT, LRR and PYD domains-containing protein 1 (protein)

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6X6C \| pdb_00006x6c	Download File View File

Cryo-EM structure of NLRP1-DPP9-VbP complex

Hollingsworth, L.R., Sharif, H., Griswold, A.R., Fontana, P., Mintseris, J., Dagbay, K.B., Paulo, J.A., Gygi, S.P., Bachovchin, D.A., Wu, H.

(2021) Nature 592: 778-783

Released	2021-03-10
Method	ELECTRON MICROSCOPY 2.9 Å
Organisms	Homo sapiens
Macromolecule	Dipeptidyl peptidase 9 (protein) NACHT, LRR and PYD domains-containing protein 1 (protein)
Unique Ligands	GK2

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6XKK \| pdb_00006xkk	Download File View File

Cryo-EM structure of the NLRP1-CARD filament

Hollingsworth, L.R., David, L., Li, Y., Sharif, H., Fontana, P., Fu, T., Wu, H.

(2021) Nat Commun 12: 189-189

Released	2020-11-25
Method	ELECTRON MICROSCOPY 3.72 Å
Organisms	Homo sapiens
Macromolecule	NACHT, LRR and PYD domains-containing protein 1 (protein)

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7WGE \| pdb_00007wge	Download File View File

Human NLRP1 complexed with thioredoxin

Zhang, Z., Ohto, U., Shimizu, T.

(2023) Nature 622: 188-194

Released	2023-07-05
Method	ELECTRON MICROSCOPY 3.4 Å
Organisms	Homo sapiens Spodoptera frugiperda
Macromolecule	NACHT, LRR and PYD domains-containing protein 1, N-terminus (protein) Thioredoxin (protein)
Unique Ligands	AGS, MG

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8ZGD \| pdb_00008zgd	Download File View File

The Crystal Structure of the NLRP1_LRR domain from Biortus.

Wang, F., Cheng, W., Yuan, Z., Qi, J., Pan, W.

To be published

Released	2024-06-26
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Homo sapiens
Macromolecule	NACHT, LRR and PYD domains-containing protein 1, N-terminus (protein)
Unique Ligands	GOL

1 to 11 of 11 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1PN5 | pdb_00001pn5

NMR structure of the NALP1 Pyrin domain (PYD)

3KAT | pdb_00003kat

Crystal Structure of the CARD domain of the human NLRP1 protein, Northeast Structural Genomics Consortium Target HR3486E

4IFP | pdb_00004ifp

X-ray Crystal Structure of Human NLRP1 CARD Domain

4IM6 | pdb_00004im6

LRR domain from human NLRP1

5Y3S | pdb_00005y3s

Crystal structure of human NLRP1 leucine rich repeat domain

6K7V | pdb_00006k7v

Structure of NLRP1 CARD filament

6X6A | pdb_00006x6a

Cryo-EM structure of NLRP1-DPP9 complex

6X6C | pdb_00006x6c

Cryo-EM structure of NLRP1-DPP9-VbP complex

6XKK | pdb_00006xkk

Cryo-EM structure of the NLRP1-CARD filament

7WGE | pdb_00007wge

Human NLRP1 complexed with thioredoxin

8ZGD | pdb_00008zgd

The Crystal Structure of the NLRP1_LRR domain from Biortus.

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1PN5 | pdb_00001pn5

3KAT | pdb_00003kat

4IFP | pdb_00004ifp

4IM6 | pdb_00004im6

5Y3S | pdb_00005y3s

6K7V | pdb_00006k7v

6X6A | pdb_00006x6a

6X6C | pdb_00006x6c

6XKK | pdb_00006xkk

7WGE | pdb_00007wge

8ZGD | pdb_00008zgd