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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Gene Name = "b2185"

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Search Summary

This query matches 5 Structures.

Refinements

Structure Determination Methodology

experimental (5)

Scientific Name of Source Organism

	Escherichia coli K-12 (5)
	Escherichia coli BL21 (2)
	Bacillus subtilis subsp. subtilis str. 168 (1)
	Escherichia coli (1)

Taxonomy

Bacteria (5)

Experimental Method

ELECTRON MICROSCOPY (5)

Polymer Entity Type

	Protein (5)
	RNA (5)

Refinement Resolution (Å)

	2.0 - 2.5 (2)
	2.5 - 3.0 (1)
	3.0 - 3.5 (1)
	> 4.5 (1)

Release Date

	2005 - 2009 (1)
	2015 - 2019 (1)
	2020 - 2024 (1)
	2025 - 2029 (2)

Enzyme Classification Name

Hydrolases (1)

Symmetry Type

Asymmetric (5)

SCOP Classification

	Alpha and beta proteins (a+b) (1)
	All beta proteins (1)
	Alpha and beta proteins (a/b) (1)
	All alpha proteins (1)
	Small proteins (1)
	Peptides (1)

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1 to 5 of 5 Structures

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2J28 \| pdb_00002j28	Download File View File

MODEL OF E. COLI SRP BOUND TO 70S RNCS

Halic, M., Blau, M., Becker, T., Mielke, T., Pool, M.R., Wild, K., Sinning, I., Beckmann, R.

(2006) Nature 444: 508-511

Released	2006-11-08
Method	ELECTRON MICROSCOPY 9.5 Å
Organisms	Escherichia coli K-12
Macromolecule	Unique protein chains: 31 Unique nucleic acid chains: 3
Unique Ligands	MG

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6SZS \| pdb_00006szs	Download File View File

Release factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilis

Muller, C., Beckert, B., Wilson, D.N.

(2019) Nat Commun 10: 5397-5397

Released	2019-12-04
Method	ELECTRON MICROSCOPY 3.06 Å
Organisms	Bacillus subtilis subsp. subtilis str. 168 Escherichia coli K-12
Macromolecule	Unique protein chains: 51 Unique nucleic acid chains: 5

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7YLA \| pdb_00007yla	Download File View File

Cryo-EM structure of 50S-HflX complex

Damu, W., Ning, G.

(2022) bioRxiv

Released	2023-01-04
Method	ELECTRON MICROSCOPY 2.52 Å
Organisms	Escherichia coli Escherichia coli K-12
Macromolecule	Unique protein chains: 30 Unique nucleic acid chains: 2
Unique Ligands	GNP, MG, NA, ZN

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9N2B \| pdb_00009n2b	Download File View File

Impacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsB ribosome (BBB-70S)

Welfer, G.A., Brady, R.A., Natchiar, S.K., Watson, Z.L., Rundlet, E.J., Alejo, J.L., Singh, A.P., Mishra, N.K., Altman, R.B., Blanchard, S.C.

(2025) Philos Trans R Soc Lond B Biol Sci 380: 20230379-20230379

Released	2025-03-19
Method	ELECTRON MICROSCOPY 2.2 Å
Organisms	Escherichia coli BL21 Escherichia coli K-12
Macromolecule	Unique protein chains: 49 Unique nucleic acid chains: 5
Unique Ligands	ATP, FME, K, MG, PUT, SPD, ZN

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9N2C \| pdb_00009n2c	Download File View File

Impacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsH ribosome (HBB-70S)

Welfer, G.A., Brady, R.A., Natchiar, S.K., Watson, Z.L., Rundlet, E.J., Alejo, J.L., Singh, A.P., Mishra, N.K., Altman, R.B., Blanchard, S.C.

(2025) Philos Trans R Soc Lond B Biol Sci 380: 20230379-20230379

Released	2025-03-19
Method	ELECTRON MICROSCOPY 2.4 Å
Organisms	Escherichia coli BL21 Escherichia coli K-12
Macromolecule	Unique protein chains: 49 Unique nucleic acid chains: 5
Unique Ligands	ATP, FME, K, MG, PUT, SPD, ZN

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

2J28 | pdb_00002j28

MODEL OF E. COLI SRP BOUND TO 70S RNCS

6SZS | pdb_00006szs

Release factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilis

7YLA | pdb_00007yla

Cryo-EM structure of 50S-HflX complex

9N2B | pdb_00009n2b

Impacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsB ribosome (BBB-70S)

9N2C | pdb_00009n2c

Impacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsH ribosome (HBB-70S)

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

2J28 | pdb_00002j28

MODEL OF E. COLI SRP BOUND TO 70S RNCS

6SZS | pdb_00006szs

Release factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilis

7YLA | pdb_00007yla

Cryo-EM structure of 50S-HflX complex

9N2B | pdb_00009n2b

Impacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsB ribosome (BBB-70S)

9N2C | pdb_00009n2c

Impacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsH ribosome (HBB-70S)