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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Source Organism Taxonomy ID (Full Lineage) = "3055"

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Search Summary

This query matches 1,717 Polymer Entities.

Refinements

Structure Determination Methodology

experimental (1,717)

Scientific Name of Source Organism

	Chlamydomonas reinhardtii (1,717)
	Escherichia coli (4)
	Chlamydomonas noctigama (1)
	Desulfurococcus mucosus (1)
	Escherichia coli BL21(DE3) (1)
	Spinacia oleracea (1)
	Synechococcus sp. (1)

Taxonomy

	Eukaryota (1,717)
	Bacteria (6)
	Archaea (1)

Experimental Method

	ELECTRON MICROSCOPY (1,402)
	X-RAY DIFFRACTION (300)
	SOLUTION NMR (15)

Polymer Entity Type

	Protein (1,697)
	RNA (18)
	DNA (2)

Refinement Resolution (Å)

	0.5 - 1.0 (2)
	1.0 - 1.5 (18)
	1.5 - 2.0 (68)
	2.0 - 2.5 (132)
	2.5 - 3.0 (556)
	3.0 - 3.5 (478)
	3.5 - 4.0 (199)
	4.0 - 4.5 (58)
	> 4.5 (191)

Release Date

	1990 - 1994 (2)
	1995 - 1999 (7)
	2000 - 2004 (34)
	2005 - 2009 (45)
	2010 - 2014 (48)
	2015 - 2019 (282)
	2020 - 2024 (1,067)
	2025 - 2029 (232)

Enzyme Classification Name

	Oxidoreductases (159)
	Hydrolases (77)
	Lyases (44)
	Transferases (44)
	Translocases (31)
	Isomerases (8)

Membrane Protein Annotation

	PDBTM (290)
	OPM (188)
	mpstruc (165)
	MemProtMD (108)

Symmetry Type

	Asymmetric (1,370)
	Cyclic (321)
	Dihedral (63)

SCOP Classification

	Alpha and beta proteins (a+b) (81)
	Alpha and beta proteins (a/b) (50)
	Membrane and cell surface proteins and peptides (91)
	All beta proteins (21)
	Artifacts (18)
	All alpha proteins (14)
	Peptides (1)

AllSelected

1 to 25 of 1,717 Polymer Entities

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1AF5: Entity 1	Download File View File

GROUP I MOBILE INTRON ENDONUCLEASE

Heath, P.J., Stephens, K.M., Monnat Junior, R.J., Stoddard, B.L.

(1997) Nat Struct Biol 4: 468-476

Released	1997-07-23
Method	X-RAY DIFFRACTION 3 Å
Chain ID	A
Organism	Chlamydomonas reinhardtii
Macromolecule	I-CREI

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1BP7: Entity 3	Download File View File

GROUP I MOBILE INTRON ENDONUCLEASE I-CREI COMPLEXED WITH HOMING SITE DNA

Jurica, M.S., Monnat Junior, R.J., Stoddard, B.L.

(1998) Mol Cell 2: 469-476

Released	1999-01-06
Method	X-RAY DIFFRACTION 3 Å
Chain IDs	E [auth A], F [auth B], G [auth C], H [auth D]
Organism	Chlamydomonas reinhardtii
Macromolecule	PROTEIN (I-CREI)

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1CFM: Entity 1	Download File View File

CYTOCHROME F FROM CHLAMYDOMONAS REINHARDTII

Chi, Y.I., Huang, L.S., Zhang, Z., Fernandez-Velasco, J.G., Malkin, R., Berry, E.A.

(2000) Biochemistry 39: 7689-7701

Released	1999-04-27
Method	X-RAY DIFFRACTION 2 Å
Chain IDs	A, B, C
Organism	Chlamydomonas reinhardtii
Macromolecule	CYTOCHROME F

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1CYI: Entity 1	Download File View File

CYTOCHROME C6

Kerfeld, C.A., Yeates, T.O.

(1995) J Mol Biology 250: 627-647

Released	1996-01-29
Method	X-RAY DIFFRACTION 1.9 Å
Chain ID	A
Organism	Chlamydomonas reinhardtii
Macromolecule	CYTOCHROME C6

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1CYJ: Entity 1	Download File View File

CYTOCHROME C6

Kerfeld, C.A., Yeates, T.O.

(1995) J Mol Biology 250: 627-647

Released	1996-01-29
Method	X-RAY DIFFRACTION 1.9 Å
Chain ID	A
Organism	Chlamydomonas reinhardtii
Macromolecule	CYTOCHROME C6

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1DBY: Entity 1	Download File View File

NMR STRUCTURES OF CHLOROPLAST THIOREDOXIN M CH2 FROM THE GREEN ALGA CHLAMYDOMONAS REINHARDTII

Lancelin, J.-M., Guilhaudis, L., Krimm, I., Blackledge, M.J., Marion, D.

(2000) Proteins 41: 334-349

Released	1999-11-08
Method	SOLUTION NMR
Chain ID	A
Organism	Chlamydomonas reinhardtii
Macromolecule	CHLOROPLAST THIOREDOXIN M CH2

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1DS9: Entity 1	Download File View File

SOLUTION STRUCTURE OF CHLAMYDOMONAS OUTER ARM DYNEIN LIGHT CHAIN 1

Wu, H.W., Maciejewski, M.W., Marintchev, A., Benashski, S.E., Mullen, G.P., King, S.M.

(2000) Nat Struct Biol 7: 575-579

Released	2000-07-26
Method	SOLUTION NMR
Chain ID	A
Organism	Chlamydomonas reinhardtii
Macromolecule	OUTER ARM DYNEIN

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1E2V: Entity 1	Download File View File

N153Q mutant of cytochrome f from Chlamydomonas reinhardtii

Sainz, G., Carrell, C.J., Ponamarev, M.V., Soriano, G.M., Cramer, W.A., Smith, J.L.

(2000) Biochemistry 39: 9164

Released	2000-08-04
Method	X-RAY DIFFRACTION 1.85 Å
Chain IDs	A, B, C
Organism	Chlamydomonas reinhardtii
Macromolecule	CYTOCHROME F

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1E2W: Entity 1	Download File View File

N168F mutant of cytochrome f from Chlamydomonas reinhardtii

Sainz, G., Carrell, C.J., Ponamarev, M.V., Soriano, G.M., Cramer, W.A., Smith, J.L.

(2000) Biochemistry 39: 9164

Released	2000-08-04
Method	X-RAY DIFFRACTION 1.6 Å
Chain IDs	A, B
Organism	Chlamydomonas reinhardtii
Macromolecule	CYTOCHROME F

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1E2Z: Entity 1	Download File View File

Q158L mutant of cytochrome f from Chlamydomonas reinhardtii

Sainz, G., Carrell, C.J., Ponamarev, M.V., Soriano, G.M., Cramer, W.A., Smith, J.L.

(2000) Biochemistry 39: 9164

Released	2000-08-04
Method	X-RAY DIFFRACTION 2.5 Å
Chain IDs	A, B, C
Organism	Chlamydomonas reinhardtii
Macromolecule	CYTOCHROME F

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1EP7: Entity 1	Download File View File

CRYSTAL STRUCTURE OF WT THIOREDOXIN H FROM CHLAMYDOMONAS REINHARDTII

Menchise, V., Corbier, C., Didierjean, C., Saviano, M., Benedetti, E., Jacquot, J.P., Aubry, A.

(2001) Biochem J 359: 65-75

Released	2001-12-12
Method	X-RAY DIFFRACTION 2.1 Å
Chain IDs	A, B
Organism	Chlamydomonas reinhardtii
Macromolecule	THIOREDOXIN CH1, H-TYPE

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1EP8: Entity 1	Download File View File

CRYSTAL STRUCTURE OF A MUTATED THIOREDOXIN, D30A, FROM CHLAMYDOMONAS REINHARDTII

Menchise, V., Corbier, C., Didierjean, C., Saviano, M., Benedetti, E., Jacquot, J.P., Aubry, A.

(2001) Biochem J 359: 65-75

Released	2001-12-12
Method	X-RAY DIFFRACTION 2.2 Å
Chain IDs	A, B
Organism	Chlamydomonas reinhardtii
Macromolecule	THIOREDOXIN CH1, H-TYPE

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1EWH: Entity 1	Download File View File

STRUCTURE OF CYTOCHROME F FROM CHLAMYDOMONAS REINHARDTII

Sainz, G., Carrell, C.J., Ponamarev, M.V., Soriano, G.M., Cramer, W.A., Smith, J.L.

(2000) Biochemistry 39: 9164-9173

Released	2000-08-09
Method	X-RAY DIFFRACTION 2.35 Å
Chain IDs	A, B, C
Organism	Chlamydomonas reinhardtii
Macromolecule	CYTOCHROME F

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1FCT: Entity 1	Download File View File

NMR STRUCTURES OF FERREDOXIN CHLOROPLASTIC TRANSIT PEPTIDE FROM CHLAMYDOMONAS REINHARDTII PROMOTED BY TRIFLUOROETHANOL IN AQUEOUS SOLUTION

Lancelin, J.-M., Blackledge, M.

(1994) FEBS Lett 343: 261-266

Released	1994-06-22
Method	SOLUTION NMR
Chain ID	A
Organism	Chlamydomonas reinhardtii
Macromolecule	FERREDOXIN CHLOROPLASTIC TRANSIT PEPTIDE SEQUENCE FROM THE GREEN ALGA

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1G9Y: Entity 3	Download File View File

HOMING ENDONUCLEASE I-CREI / DNA SUBSTRATE COMPLEX WITH CALCIUM

Chevalier, B., Monnat, R.J., Stoddard, B.L.

(2001) Nat Struct Biol 8: 312-316

Released	2001-04-02
Method	X-RAY DIFFRACTION 2.05 Å
Chain IDs	C [auth A], D [auth B]
Organism	Chlamydomonas reinhardtii
Macromolecule	DNA ENDONUCLEASE I-CREI

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1G9Z: Entity 5	Download File View File

LAGLIDADG HOMING ENDONUCLEASE I-CREI / DNA PRODUCT COMPLEX WITH MAGNESIUM

Chevalier, B., Monnat, R.J., Stoddard, B.L.

(2001) Nat Struct Biol 8: 312-316

Released	2001-04-02
Method	X-RAY DIFFRACTION 1.8 Å
Chain IDs	E [auth A], F [auth B]
Organism	Chlamydomonas reinhardtii
Macromolecule	DNA ENDONUCLEASE I-CREI

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1GK8: Entity 1	Download File View File

Rubisco from Chlamydomonas reinhardtii

Taylor, T.C.

(2001) J Biological Chem 276: 48159

Released	2001-10-24
Method	X-RAY DIFFRACTION 1.4 Å
Chain IDs	A, B [auth C], C [auth E], D [auth G]
Organism	Chlamydomonas reinhardtii
Macromolecule	RIBULOSE-1,5 BISPHOSPHATE CARBOXYLASE LARGE CHAIN

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1GK8: Entity 2	Download File View File

Rubisco from Chlamydomonas reinhardtii

Taylor, T.C.

(2001) J Biological Chem 276: 48159

Released	2001-10-24
Method	X-RAY DIFFRACTION 1.4 Å
Chain IDs	E [auth I], F [auth K], G [auth M], H [auth O]
Organism	Chlamydomonas reinhardtii
Macromolecule	RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1

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1IR2: Entity 1	Download File View File

Crystal Structure of Activated Ribulose-1,5-bisphosphate Carboxylase/oxygenase (Rubisco) from Green alga, Chlamydomonas reinhardtii Complexed with 2-Carboxyarabinitol-1,5-bisphosphate (2-CABP)

Mizohata, E., Matsumura, H., Okano, Y., Kumei, M., Takuma, H., Onodera, J., Kato, K., Shibata, N., Inoue, T., Yokota, A., Kai, Y.

(2002) J Mol Biology 316: 679-691

Released	2002-03-20
Method	X-RAY DIFFRACTION 1.84 Å
Chain IDs	A, AA [auth X], C [auth B], CA [auth Y], E [auth C] More (16)
Organism	Chlamydomonas reinhardtii
Macromolecule	Large subunit of Rubisco

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1IR2: Entity 2	Download File View File

Crystal Structure of Activated Ribulose-1,5-bisphosphate Carboxylase/oxygenase (Rubisco) from Green alga, Chlamydomonas reinhardtii Complexed with 2-Carboxyarabinitol-1,5-bisphosphate (2-CABP)

Mizohata, E., Matsumura, H., Okano, Y., Kumei, M., Takuma, H., Onodera, J., Kato, K., Shibata, N., Inoue, T., Yokota, A., Kai, Y.

(2002) J Mol Biology 316: 679-691

Released	2002-03-20
Method	X-RAY DIFFRACTION 1.84 Å
Chain IDs	B [auth I], BA [auth 6], D [auth J], DA [auth 7], F [auth K] More (16)
Organism	Chlamydomonas reinhardtii
Macromolecule	Small subunit of Rubisco

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1M9L: Entity 1	Download File View File

Relaxation-based Refined Structure Of Chlamydomonas Outer Arm Dynein Light Chain 1

Wu, H.W., Maciejewski, M.W., Marintchev, A., Benashski, S.E., Mullen, G.P., King, S.M.

(2003) Biochemistry 42: 57-71

Released	2003-03-04
Method	SOLUTION NMR
Chain ID	A
Organism	Chlamydomonas reinhardtii
Macromolecule	Outer Arm Dynein Light Chain 1

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1MOW: Entity 3	Download File View File

E-DreI

Chevalier, B.S., Kortemme, T., Chadsey, M.S., Baker, D., Monnat Jr., R.J., Stoddard, B.L.

(2002) Mol Cell 10: 895-905

Released	2002-11-29
Method	X-RAY DIFFRACTION 2.4 Å
Chain IDs	I [auth A], J [auth D], K [auth G], L [auth J]
Organism	Chlamydomonas reinhardtii Desulfurococcus mucosus
Macromolecule	chimera of homing endonuclease I-DmoI and DNA endonuclease I-CreI

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1N3E: Entity 3	Download File View File

Crystal structure of I-CreI bound to a palindromic DNA sequence I (palindrome of left side of wildtype DNA target sequence)

Chevalier, B., Turmel, M., Lemieux, C., Monnat, R.J., Stoddard, B.L.

(2003) J Mol Biology 329: 253-269

Released	2003-06-03
Method	X-RAY DIFFRACTION 2.5 Å
Chain IDs	I [auth A], J [auth B], K [auth G], L [auth H]
Organism	Chlamydomonas reinhardtii
Macromolecule	DNA endonuclease I-CreI

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1N3F: Entity 3	Download File View File

Crystal structure of I-CreI bound to a palindromic DNA sequence II (palindrome of right side of wildtype DNA target sequence)

Chevalier, B., Turmel, M., Lemieux, C., Monnat, R.J., Stoddard, B.L.

(2003) J Mol Biology 329: 253-269

Released	2003-06-03
Method	X-RAY DIFFRACTION 2 Å
Chain IDs	I [auth A], J [auth B], K [auth G], L [auth H]
Organism	Chlamydomonas reinhardtii
Macromolecule	DNA endonuclease I-CreI