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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Source Organism Taxonomy Name (Full Lineage) = "Achromobacter xylosoxidans"

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Search Summary

This query matches 105 Structures.

Refinements

Structure Determination Methodology

experimental (105)

Scientific Name of Source Organism

	Achromobacter xylosoxidans (104)
	Achromobacter xylosoxidans NBRC 15126 = ATCC 27061 (1)
	Hyphomicrobium denitrificans (1)

Taxonomy

Bacteria (105)

Experimental Method

	X-RAY DIFFRACTION (100)
	ELECTRON MICROSCOPY (4)
	SOLUTION NMR (1)

Polymer Entity Type

Protein (105)

Refinement Resolution (Å)

	0.5 - 1.0 (6)
	1.0 - 1.5 (43)
	1.5 - 2.0 (34)
	2.0 - 2.5 (13)
	2.5 - 3.0 (2)
	3.0 - 3.5 (4)
	3.5 - 4.0 (1)
	> 4.5 (1)

Release Date

	1985 - 1989 (1)
	1990 - 1994 (2)
	1995 - 1999 (6)
	2000 - 2004 (16)
	2005 - 2009 (16)
	2010 - 2014 (37)
	2015 - 2019 (22)
	2020 - 2024 (5)

Enzyme Classification Name

	Oxidoreductases (44)
	Lyases (1)

Symmetry Type

	Cyclic (91)
	Asymmetric (14)
	Dihedral (1)

SCOP Classification

	All beta proteins (47)
	All alpha proteins (51)
	Artifacts (3)
	Alpha and beta proteins (a+b) (1)
	Alpha and beta proteins (a/b) (1)

AllSelected

1 to 25 of 105 Structures

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1AZB \| pdb_00001azb	Download File View File

STRUCTURE OF APO-AZURIN FROM ALCALIGENES DENITRIFICANS AT 1.8 ANGSTROMS RESOLUTION

Baker, E.N., Shepard, W.E.B.

(1993) Acta Crystallogr D Biol Crystallogr 49: 331-343

Released	1993-10-31
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	AZURIN (protein)
Unique Ligands	CU, SO4

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1AZC \| pdb_00001azc	Download File View File

STRUCTURE OF APO-AZURIN FROM ALCALIGENES DENITRIFICANS AT 1.8 ANGSTROMS RESOLUTION

Baker, E.N., Shepard, W.E.B., Kingston, R.L.

(1993) Acta Crystallogr D Biol Crystallogr 49: 331-343

Released	1993-10-31
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	AZURIN (protein)
Unique Ligands	CU, SO4

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1BQ5 \| pdb_00001bq5	Download File View File

NITRITE REDUCTASE FROM ALCALIGENES XYLOSOXIDANS GIFU 1051

Inoue, T., Gotowda, M., Deligeer, Suzuki, S., Kataoka, K., Yamaguchi, K., Watanabe, H., Goho, M., Yasushi, K.A.I.

(1998) J Biochem 124: 876-879

Released	1999-08-21
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	NITRITE REDUCTASE (protein)
Unique Ligands	CU

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1CGN \| pdb_00001cgn	Download File View File

CYTOCHROME C'

Dobbs, A.J., Faber, H.R., Anderson, B.F., Baker, E.N.

(1996) Acta Crystallogr D Biol Crystallogr 52: 356-368

Released	1995-07-31
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	CYTOCHROME C (protein)
Unique Ligands	HEC

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1DYZ \| pdb_00001dyz	Download File View File

OXIDISED AZURIN II FROM ALCALIGENES XYLOSOXIDANS

Dodd, F.E., Abraham, Z.H.L., Eady, R.R., Hasnain, S.S.

(2000) Acta Crystallogr D Biol Crystallogr 56: 690

Released	2000-07-10
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	AZURIN II (protein)
Unique Ligands	CU

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1DZ0 \| pdb_00001dz0	Download File View File

REDUCED AZURIN II FROM ALCALIGENES XYLOSOXIDANS

Dodd, F.E., Abraham, Z.H.L., Eady, R.R., Hasnain, S.S.

(2000) Acta Crystallogr D Biol Crystallogr 56: 690

Released	2000-07-04
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	AZURIN II (protein)
Unique Ligands	CU1

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1E83 \| pdb_00001e83	Download File View File

Cytochrome c' from Alcaligenes xylosoxidans - oxidized structure

Lawson, D.M., Stevenson, C.E.M., Andrew, C.R., Eady, R.R.

(2000) EMBO J 19: 5661

Released	2000-11-06
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	CYTOCHROME C' (protein)
Unique Ligands	HEC

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1E84 \| pdb_00001e84	Download File View File

Cytochrome c' from Alcaligenes xylosoxidans - reduced structure

Lawson, D.M., Stevenson, C.E.M., Andrew, C.R., Eady, R.R.

(2000) EMBO J 19: 5661

Released	2000-11-06
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	CYTOCHROME C' (protein)
Unique Ligands	HEC

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1E85 \| pdb_00001e85	Download File View File

Cytochrome c' from Alcaligenes xylosoxidans - reduced structure with NO bound to proximal side of heme

Lawson, D.M., Stevenson, C.E.M., Andrew, C.R., Eady, R.R.

(2000) EMBO J 19: 5661

Released	2000-11-06
Method	X-RAY DIFFRACTION 1.35 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	CYTOCHROME C' (protein)
Unique Ligands	HEC, NO

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1E86 \| pdb_00001e86	Download File View File

Cytochrome c' from Alcaligenes xylosoxidans - reduced structure with CO bound to distal side of heme

Lawson, D.M., Stevenson, C.E.M., Andrew, C.R., Eady, R.R.

(2000) EMBO J 19: 5661

Released	2000-11-06
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	CYTOCHROME C' (protein)
Unique Ligands	CMO, HEC

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1GS6 \| pdb_00001gs6	Download File View File

Crystal structure of M144A mutant of Alcaligenes xylosoxidans Nitrite Reductase

Ellis, M.J., Prudencio, M., Dodd, F.E., Strange, R.W., Sawers, G., Eady, R.R., Hasnain, S.S.

(2002) J Mol Biology 316: 51

Released	2002-02-14
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE (protein)
Unique Ligands	CU, MG

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1GS7 \| pdb_00001gs7	Download File View File

Crystal structure of H254F mutant of Alcaligenes xylosoxidans Nitrite Reductase

Ellis, M.J., Prudencio, M., Dodd, F.E., Strange, R.W., Sawers, G., Eady, R.R., Hasnain, S.S.

(2002) J Mol Biology 316: 51

Released	2002-02-14
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE (protein)
Unique Ligands	CU, ZN

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1GS8 \| pdb_00001gs8	Download File View File

Crystal structure of mutant D92N Alcaligenes xylosoxidans Nitrite Reductase

Ellis, M.J., Prudencio, M., Dodd, F.E., Strange, R.W., Sawers, G., Eady, R.R., Hasnain, S.S.

(2002) J Mol Biology 316: 51

Released	2002-02-14
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE (protein)
Unique Ligands	CU, ZN

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1HAU \| pdb_00001hau	Download File View File

X-RAY STRUCTURE OF A BLUE COPPER NITRITE REDUCTASE AT HIGH PH AND IN COPPER FREE FORM AT 1.9 A RESOLUTION

Ellis, M.J., Dodd, F.E., Strange, R.W., Prudencio, M., Sawerseady, R.R., Hasnain, S.S.

(2001) Acta Crystallogr D Biol Crystallogr 57: 1110

Released	2001-08-02
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE (protein)
Unique Ligands	CU

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1HAW \| pdb_00001haw	Download File View File

X-RAY STRUCTURE OF A BLUE COPPER NITRITE REDUCTASE AT HIGH PH AND IN COPPER FREE FORM AT 1.9 A RESOLUTION

Ellis, M.J., Dodd, F.E., Strange, R.W., Prudencio, M., Sawerseady, R.R., Hasnain, S.S.

(2001) Acta Crystallogr D Biol Crystallogr 57: 1110

Released	2001-08-02
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE (protein)
Unique Ligands	CU1

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1NDR \| pdb_00001ndr	Download File View File

CRYSTALLOGRAPHIC STRUCTURE OF A BLUE COPPER NITRITE REDUCTASE FROM ALCALIGENES XYLOSOXIDANS

Dodd, F.E., Hasnain, S.S., Abraham, Z.H.L., Eady, R.R., Smith, B.E.

(1997) Acta Crystallogr D Biol Crystallogr 53: 406-418

Released	1997-07-07
Method	X-RAY DIFFRACTION 3 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	NITRITE REDUCTASE (protein)
Unique Ligands	CU

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1NDS \| pdb_00001nds	Download File View File

CRYSTALLOGRAPHIC STRUCTURE OF A SUBSTRATE BOUND BLUE COPPER NITRITE REDUCTASE FROM ALCALIGENES XYLOSOXIDANS

Dodd, F.E., Hasnain, S.S., Abraham, Z.H.L., Eady, R.R., Smith, B.E.

(1997) Acta Crystallogr D Biol Crystallogr 53: 406-418

Released	1997-07-07
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	NITRITE REDUCTASE (protein)
Unique Ligands	CU, NO2

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1NDT \| pdb_00001ndt	Download File View File

NITRITE REDUCTASE FROM ALCALIGENES XYLOSOXIDANS

Dodd, F.E., Vanbeeumen, J., Eady, R.R., Hasnain, S.S.

(1998) J Mol Biology 282: 369-382

Released	1998-11-04
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	PROTEIN (NITRITE REDUCTASE) (protein)
Unique Ligands	CL, CU

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1OBF \| pdb_00001obf	Download File View File

The crystal structure of Glyceraldehyde 3-phosphate Dehydrogenase from Alcaligenes xylosoxidans at 1.7A resolution.

Antonyuk, S.V., Eady, R.R., Strange, R.W., Hasnain, S.S.

(2003) Acta Crystallogr D Biol Crystallogr 59: 835

Released	2003-06-12
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE (protein)
Unique Ligands	K, PG4, SO4

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1OE1 \| pdb_00001oe1	Download File View File

Atomic Resolution Structure of the Wildtype Native Nitrite Reductase from Alcaligenes xylosoxidans

Ellis, M.J., Dodd, F.E., Hasnain, S.S.

(2003) J Mol Biology 328: 429

Released	2003-04-17
Method	X-RAY DIFFRACTION 1.04 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE (protein)
Unique Ligands	CU, PG4

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1OE2 \| pdb_00001oe2	Download File View File

Atomic Resolution Structure of D92E Mutant of Alcaligenes xylosoxidans Nitrite Reductase

Ellis, M.J., Dodd, F.E., Sawers, G., Eady, R.R., Hasnain, S.S.

(2003) J Mol Biology 328: 429

Released	2003-04-17
Method	X-RAY DIFFRACTION 1.12 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE (protein)
Unique Ligands	CU, PG4

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1OE3 \| pdb_00001oe3	Download File View File

Atomic resolution structure of 'Half Apo' NiR

Ellis, M.J., Dodd, F.E., Sawers, G., Eady, R.R., Hasnain, S.S.

(2003) J Mol Biology 328: 429

Released	2004-07-21
Method	X-RAY DIFFRACTION 1.15 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE (protein)
Unique Ligands	CU, PG4

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1RKR \| pdb_00001rkr	Download File View File

CRYSTAL STRUCTURE OF AZURIN-I FROM ALCALIGENES XYLOSOXIDANS NCIMB 11015

Li, C., Inoue, T., Gotowda, M., Suzuki, S., Yamaguchi, K., Kataoka, K., Kai, Y.

(1998) Acta Crystallogr D Biol Crystallogr 54: 347-354

Released	1998-05-20
Method	X-RAY DIFFRACTION 2.45 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	AZURIN-I (protein)
Unique Ligands	CU

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1WA0 \| pdb_00001wa0	Download File View File

Crystal Structure Of W138H Mutant Of Alcaligenes Xylosoxidans Nitrite Reductase

Barrett, M.L., Harris, R.L., Antonyuk, S.V., Strange, R.W., Hough, M.A., Eady, R.R., Sawers, G., Hasnain, S.S.

(2004) Biochemistry 43: 16311

Released	2005-01-04
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE (protein)
Unique Ligands	CU, MES, PG4, SO4, ZN

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1WA1 \| pdb_00001wa1	Download File View File

Crystal Structure Of H313Q Mutant Of Alcaligenes Xylosoxidans Nitrite Reductase

Barrett, M.L., Harris, R.L., Antonyuk, S.V., Strange, R.W., Hough, M.A., Eady, R.R., Sawers, G., Hasnain, S.S.

(2004) Biochemistry 43: 16311

Released	2005-01-04
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE (protein)
Unique Ligands	CU, MES, SO4, ZN

1 to 25 of 105 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1AZB | pdb_00001azb

1AZC | pdb_00001azc

1BQ5 | pdb_00001bq5

1CGN | pdb_00001cgn

1DYZ | pdb_00001dyz

1DZ0 | pdb_00001dz0

1E83 | pdb_00001e83

1E84 | pdb_00001e84

1E85 | pdb_00001e85

1E86 | pdb_00001e86

1GS6 | pdb_00001gs6

1GS7 | pdb_00001gs7

1GS8 | pdb_00001gs8

1HAU | pdb_00001hau

1HAW | pdb_00001haw

1NDR | pdb_00001ndr

1NDS | pdb_00001nds

1NDT | pdb_00001ndt

1OBF | pdb_00001obf

1OE1 | pdb_00001oe1

1OE2 | pdb_00001oe2

1OE3 | pdb_00001oe3

1RKR | pdb_00001rkr

1WA0 | pdb_00001wa0

1WA1 | pdb_00001wa1