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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Source Organism Taxonomy Name (Full Lineage) = "Spodoptera frugiperda"

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Search Summary

This query matches 50 Structures.

Refinements

Structure Determination Methodology

experimental (50)

Scientific Name of Source Organism

	Spodoptera frugiperda (50)
	Homo sapiens (15)
	Monkeypox virus (6)
	Flock House virus (4)
	Human immunodeficiency virus 1 (3)
	Rattus norvegicus (2)
	Yersinia enterocolitica (2)
	Bos taurus (1)
	Danio rerio (1)
	Drosophila melanogaster (1)

More...

Taxonomy

	Eukaryota (50)
	Riboviria (10)
	Varidnaviria (6)
	Bacteria (3)
	other sequences (1)

Experimental Method

	X-RAY DIFFRACTION (26)
	ELECTRON MICROSCOPY (24)

Polymer Entity Type

	Protein (50)
	RNA (15)
	DNA (7)

Refinement Resolution (Å)

	1.5 - 2.0 (3)
	2.0 - 2.5 (10)
	2.5 - 3.0 (12)
	3.0 - 3.5 (13)
	3.5 - 4.0 (8)
	4.0 - 4.5 (3)
	> 4.5 (1)

Release Date

	2000 - 2004 (4)
	2005 - 2009 (6)
	2010 - 2014 (7)
	2015 - 2019 (13)
	2020 - 2024 (19)
	2025 - 2029 (1)

Enzyme Classification Name

	Hydrolases (23)
	Transferases (7)

Membrane Protein Annotation

	PDBTM (5)
	mpstruc (3)
	OPM (3)
	MemProtMD (3)

Symmetry Type

	Asymmetric (27)
	Cyclic (17)
	Icosahedral (4)
	Helical (2)
	Dihedral (1)

SCOP Classification

	Alpha and beta proteins (a/b) (13)
	All beta proteins (4)
	Alpha and beta proteins (a+b) (1)
	Artifacts (1)

AllSelected

1 to 25 of 50 Structures

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1FMJ \| pdb_00001fmj	Download File View File

CRYSTAL STRUCTURE OF MERCURY DERIVATIVE OF RETINOL DEHYDRATASE IN A COMPLEX WITH RETINOL AND PAP

Pakhomova, S., Kobayashi, M., Buck, J., Newcomer, M.E.

(2001) Nat Struct Biol 8: 447-451

Released	2001-05-02
Method	X-RAY DIFFRACTION 2 Å
Organisms	Spodoptera frugiperda
Macromolecule	RETINOL DEHYDRATASE (protein)
Unique Ligands	A3P, CA, HG, RTL

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1FML \| pdb_00001fml	Download File View File

CRYSTAL STRUCTURE OF RETINOL DEHYDRATASE IN A COMPLEX WITH RETINOL AND PAP

Pakhomova, S., Kobayashi, M., Buck, J., Newcomer, M.E.

(2001) Nat Struct Biol 8: 447-451

Released	2001-05-02
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Spodoptera frugiperda
Macromolecule	RETINOL DEHYDRATASE (protein)
Unique Ligands	A3P, CA, RTL

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1M72 \| pdb_00001m72	Download File View File

Crystal Structure of Caspase-1 from Spodoptera frugiperda

Forsyth, C.M., Lemongello, D., Friesen, P.D., Fisher, A.J.

(2004) J Biological Chem 279: 7001-7008

Released	2004-01-20
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Spodoptera frugiperda
Macromolecule	Ace-Asp-Glu-Val-Asp-chloromethylketone (protein) Caspase-1 (protein)
Unique Ligands	EDO

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1UU9 \| pdb_00001uu9	Download File View File

Structure of human PDK1 kinase domain in complex with BIM-3

Komander, D., Kular, G.S., Schuttelkopf, A.W., Deak, M., Prakash, K.R., Bain, J., Elliot, M., Garrido-Franco, M., Kozikowski, A.P., Alessi, D.R., Van Aalten, D.M.F.

(2004) Structure 12: 215

Released	2004-03-04
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Spodoptera frugiperda
Macromolecule	3-PHOSPHOINOSITIDE DEPENDENT PROTEIN KINASE-1 (protein)
Unique Ligands	BI3, GOL, SO4

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1X8J \| pdb_00001x8j	Download File View File

Crystal structure of retinol dehydratase in complex with androsterone and inactive cofactor PAP

Pakhomova, S., Buck, J., Newcomer, M.E.

(2005) Protein Sci 14: 176-182

Released	2005-02-08
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Spodoptera frugiperda
Macromolecule	retinol dehydratase (protein)
Unique Ligands	A3P, AOI, CA

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1X8K \| pdb_00001x8k	Download File View File

Crystal structure of retinol dehydratase in complex with anhydroretinol and inactive cofactor PAP

Pakhomova, S., Buck, J., Newcomer, M.E.

(2005) Protein Sci 14: 176-182

Released	2005-02-08
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Spodoptera frugiperda
Macromolecule	retinol dehydratase (protein)
Unique Ligands	A3P, ANR, CA, EMC

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1X8L \| pdb_00001x8l	Download File View File

Crystal structure of retinol dehydratase in complex with all-trans-4-oxoretinol and inactive cofactor PAP

Pakhomova, S., Buck, J., Newcomer, M.E.

(2005) Protein Sci 14: 176-182

Released	2005-02-08
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Spodoptera frugiperda
Macromolecule	retinol dehydratase (protein)
Unique Ligands	A3P, CA, HG, OXR

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2I1J \| pdb_00002i1j	Download File View File

Moesin from Spodoptera frugiperda at 2.1 angstroms resolution

Li, Q., Nance, M.R., Tesmer, J.J.G.

(2007) J Mol Biology 365: 1446-1459

Released	2006-12-19
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Spodoptera frugiperda
Macromolecule	Moesin (protein)
Unique Ligands	CL, GOL, URE

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2I1K \| pdb_00002i1k	Download File View File

Moesin from Spodoptera frugiperda reveals the coiled-coil domain at 3.0 angstrom resolution

Nance, M.R., Tesmer, J.J.G.

(2007) J Mol Biology 365: 1446-1459

Released	2006-12-19
Method	X-RAY DIFFRACTION 3 Å
Organisms	Spodoptera frugiperda
Macromolecule	Moesin (protein)
Unique Ligands	CL, GOL, URE

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2NN3 \| pdb_00002nn3	Download File View File

structure of pro-sf-caspase-1

Fisher, A.J., Ni, L.

To be published

Released	2007-10-23
Method	X-RAY DIFFRACTION 3 Å
Organisms	Spodoptera frugiperda
Macromolecule	Caspase-1 (protein)

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3LOB \| pdb_00003lob	Download File View File

Crystal Structure of Flock House Virus calcium mutant

Johnson, J.E., Banerjee, M., Speir, J.A., Huang, R.

(2010) J Virol 84: 4737-4746

Released	2010-04-21
Method	X-RAY DIFFRACTION 3.6 Å
Organisms	Flock House virus Spodoptera frugiperda
Macromolecule	Coat protein beta (protein) Coat protein gamma (protein) RNA (5'-R(UPUPUAPUPCPUP(P))-3') (nucleic acid)
Unique Ligands	SO4

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4CI6 \| pdb_00004ci6	Download File View File

Mechanisms of crippling actin-dependent phagocytosis by YopO

Lee, W.L., Grimes, J.M., Robinson, R.C.

(2015) Nat Struct Mol Biol 22: 248

Released	2015-01-28
Method	X-RAY DIFFRACTION 2.651 Å
Organisms	Spodoptera frugiperda Yersinia enterocolitica
Macromolecule	ACTIN (protein) PROTEIN KINASE YOPO (protein)
Unique Ligands	ATP, CA

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4FSJ \| pdb_00004fsj	Download File View File

Crystal structure of the virus like particle of Flock House virus

Speir, J.A., Chen, Z., Reddy, V.S., Johnson, J.E.

(2012) To be published

Released	2012-08-01
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Flock House virus Spodoptera frugiperda
Macromolecule	Capsid protein Gamma (protein) Capsid protein beta (protein) Random cellular RNA fragments (nucleic acid)
Unique Ligands	CA, CL, EPE

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4FTE \| pdb_00004fte	Download File View File

Crystal structure of the D75N mutant capsid of Flock House virus

Speir, J.A., Chen, Z., Reddy, V.S., Johnson, J.E.

(2012) To be published

Released	2012-08-01
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Flock House virus Spodoptera frugiperda
Macromolecule	Capsid protein alpha (protein) Random cellular RNAs (nucleic acid)
Unique Ligands	CA, CL, EPE, SO4

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4FTS \| pdb_00004fts	Download File View File

Crystal structure of the N363T mutant of the Flock House virus capsid

Speir, J.A., Chen, Z., Reddy, V.S., Johnson, J.E.

(2012) To be published

Released	2012-08-01
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Flock House virus Spodoptera frugiperda
Macromolecule	Capsid protein alpha (protein) Random cellular RNAs (nucleic acid)
Unique Ligands	CA, CL, EPE, SO4

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4H0N \| pdb_00004h0n	Download File View File

Crystal structure of Spodoptera frugiperda DNMT2 E260A/E261A/K263A mutant

Li, S., Du, J., Yang, H., Yin, J., Zhong, J., Ding, J.

(2013) J Mol Cell Biol 5: 64-66

Released	2012-11-14
Method	X-RAY DIFFRACTION 2.712 Å
Organisms	Spodoptera frugiperda
Macromolecule	DNMT2 (protein)
Unique Ligands	CA, SAH

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4KRE \| pdb_00004kre	Download File View File

Structure of Human Argonaute-1 bound to endogenous Sf9 RNA

Faehnle, C.R., Elkayam, E., Joshua-Tor, L.

(2013) Cell Rep 3: 1901-1909

Released	2013-06-19
Method	X-RAY DIFFRACTION 1.754 Å
Organisms	Homo sapiens Spodoptera frugiperda
Macromolecule	Protein argonaute-1 (protein) RNA (5'-R(PAPAPUPAPUPUPAPAPAAPAPAPAPAPAPAPAPAPAPA)-3') (nucleic acid)

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4KXT \| pdb_00004kxt	Download File View File

Structure of human ARGONAUTE1 in complex with guide RNA

Nakanishi, K., Patel, D.J.

(2013) Cell Rep 3: 1893-1900

Released	2013-07-31
Method	X-RAY DIFFRACTION 2.294 Å
Organisms	Homo sapiens Spodoptera frugiperda
Macromolecule	Protein argonaute-1 (protein) RNA (nucleic acid)

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4UFT \| pdb_00004uft	Download File View File

Structure of the helical Measles virus nucleocapsid

Gutsche, I., Desfosses, A., Effantin, G., Ling, W.L., Haupt, M., Ruigrok, R.W.H., Sachse, C., Schoehn, G.

(2015) Science 348: 704

Released	2015-04-29
Method	ELECTRON MICROSCOPY 4.3 Å
Organisms	Measles virus strain Halle Spodoptera frugiperda
Macromolecule	NUCLEOPROTEIN (protein) 5'-R(CPCPCPCPCPCP)-3' (nucleic acid)

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5CE3 \| pdb_00005ce3	Download File View File

The Yersinia YopO - actin complex with MgADP

Lee, W.L., Singaravelu, P., Grimes, J.M., Robinson, R.C.

To be published

Released	2016-07-06
Method	X-RAY DIFFRACTION 2.93 Å
Organisms	Spodoptera frugiperda Yersinia enterocolitica
Macromolecule	Actin (protein) Protein kinase YopO (protein)
Unique Ligands	ADP, ATP, CA, MG

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5CG0 \| pdb_00005cg0	Download File View File

Crystal structure of Spodoptera frugiperda Beta-glycosidase

Tamaki, F.K., Souza, D.P., Souza, V.P., Farah, S.C., Marana, S.R.

(2016) PLoS One 11: e0167978-e0167978

Released	2015-12-09
Method	X-RAY DIFFRACTION 2.09 Å
Organisms	Spodoptera frugiperda
Macromolecule	Beta-glucosidase (protein)
Unique Ligands	NAG, TRS
Unique branched monosaccharides	NAG

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5FLC \| pdb_00005flc	Download File View File

Architecture of human mTOR Complex 1 - 5.9 Angstrom reconstruction

Aylett, C.H.S., Sauer, E., Imseng, S., Boehringer, D., Hall, M.N., Ban, N., Maier, T.

(2016) Science 351: 48

Released	2015-12-30
Method	ELECTRON MICROSCOPY 5.9 Å
Organisms	Homo sapiens Spodoptera frugiperda
Macromolecule	Unique protein chains: 6
Unique Ligands	RAP

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5HY6 \| pdb_00005hy6	Download File View File

Spodoptera frugiperda eukaryotic translation initiation factor EIF5A

Li, A.W.H., Oliver, A.W., Pearl, L.H.

To be published

Released	2016-02-10
Method	X-RAY DIFFRACTION 2.186 Å
Organisms	Spodoptera frugiperda
Macromolecule	Eukaryotic translation initiation factor 5A (protein)

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5SY1 \| pdb_00005sy1	Download File View File

Structure of the STRA6 receptor for retinol uptake in complex with calmodulin

Clarke, O.B., Chen, Y., Mancia, F.

(2016) Science 353:

Released	2016-08-24
Method	ELECTRON MICROSCOPY 3.9 Å
Organisms	Danio rerio Spodoptera frugiperda
Macromolecule	Calmodulin (protein) STRA6 (protein)
Unique Ligands	CA, CLR

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5V54 \| pdb_00005v54	Download File View File

Crystal structure of 5-HT1B receptor in complex with methiothepin

Yin, W.C., Zhou, X.E., Yang, D., de Waal, P., Wang, M.T., Dai, A., Cai, X., Huang, C.Y., Liu, P., Yin, Y., Liu, B., Caffrey, M., Melcher, K., Xu, Y., Wang, M.W., Xu, H.E., Jiang, Y.

(2018) Cell Discov

Released	2018-02-07
Method	X-RAY DIFFRACTION 3.9 Å
Organisms	Homo sapiens Spodoptera frugiperda
Macromolecule	5-hydroxytryptamine receptor 1B,OB-1 fused 5-HT1b receptor,5-hydroxytryptamine receptor 1B (protein)
Unique Ligands	89F

1 to 25 of 50 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1FMJ | pdb_00001fmj

1FML | pdb_00001fml

1M72 | pdb_00001m72

1UU9 | pdb_00001uu9

1X8J | pdb_00001x8j

1X8K | pdb_00001x8k

1X8L | pdb_00001x8l

2I1J | pdb_00002i1j

2I1K | pdb_00002i1k

2NN3 | pdb_00002nn3

3LOB | pdb_00003lob

4CI6 | pdb_00004ci6

4FSJ | pdb_00004fsj

4FTE | pdb_00004fte

4FTS | pdb_00004fts

4H0N | pdb_00004h0n

4KRE | pdb_00004kre

4KXT | pdb_00004kxt

4UFT | pdb_00004uft

5CE3 | pdb_00005ce3

5CG0 | pdb_00005cg0

5FLC | pdb_00005flc

5HY6 | pdb_00005hy6

5SY1 | pdb_00005sy1

5V54 | pdb_00005v54