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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Source Organism Taxonomy Name (Full Lineage) = "Streptococcus pyogenes"

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Search Summary

This query matches 413 Structures.

Refinements

Structure Determination Methodology

experimental (413)

Scientific Name of Source Organism

	Streptococcus pyogenes (249)
	Streptococcus pyogenes serotype M1 (85)
	synthetic construct (58)
	Homo sapiens (35)
	Streptococcus pyogenes M1 GAS (22)
	Escherichia phage Lambda (14)
	Streptococcus pyogenes SSI-1 (9)
	Streptococcus pyogenes MGAS315 (8)
	Streptococcus pyogenes serotype M3 (8)
	Streptococcus pyogenes MGAS5005 (7)

More...

Taxonomy

	Bacteria (413)
	other sequences (58)
	Eukaryota (45)
	Duplodnaviria (16)
	Riboviria (4)
	Monodnaviria (1)
	unclassified bacterial viruses (1)

Experimental Method

	X-RAY DIFFRACTION (336)
	ELECTRON MICROSCOPY (61)
	SOLUTION NMR (16)

Polymer Entity Type

	Protein (413)
	RNA (106)
	DNA (98)
	NA-hybrid (3)

Refinement Resolution (Å)

	1.0 - 1.5 (17)
	1.5 - 2.0 (111)
	2.0 - 2.5 (89)
	2.5 - 3.0 (86)
	3.0 - 3.5 (70)
	3.5 - 4.0 (18)
	4.0 - 4.5 (1)
	> 4.5 (5)

Release Date

	1995 - 1999 (3)
	2000 - 2004 (25)
	2005 - 2009 (64)
	2010 - 2014 (73)
	2015 - 2019 (101)
	2020 - 2024 (144)
	2025 - 2029 (3)

Enzyme Classification Name

	Hydrolases (175)
	Lyases (26)
	Oxidoreductases (22)
	Transferases (15)
	Isomerases (6)
	Ligases (5)

Membrane Protein Annotation

	OPM (1)
	mpstruc (1)

Symmetry Type

	Asymmetric (299)
	Cyclic (107)
	Dihedral (27)
	Tetrahedral (3)
	Icosahedral (1)

SCOP Classification

	Alpha and beta proteins (a/b) (44)
	Alpha and beta proteins (a+b) (38)
	All beta proteins (25)
	Artifacts (36)
	All alpha proteins (19)
	Small proteins (9)
	Multi-domain proteins (alpha and beta) (4)
	Membrane and cell surface proteins and peptides (1)

AllSelected

1 to 25 of 413 Structures

Page 1 of 17

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1AN8 \| pdb_00001an8	Download File View File

CRYSTAL STRUCTURE OF THE STREPTOCOCCAL SUPERANTIGEN SPE-C

Roussel, A., Baker, E.N.

(1997) Nat Struct Biol 4: 635-643

Released	1998-04-29
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Streptococcus pyogenes
Macromolecule	STREPTOCOCCAL PYROGENIC EXOTOXIN C (protein)

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1B1Z \| pdb_00001b1z	Download File View File

STREPTOCOCCAL PYROGENIC EXOTOXIN A1

Papageorgiou, A.C., Acharya, K.R.

(1999) EMBO J 18: 9-21

Released	1999-11-24
Method	X-RAY DIFFRACTION 2.57 Å
Organisms	Streptococcus pyogenes
Macromolecule	PROTEIN (TOXIN) (protein)

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1BXT \| pdb_00001bxt	Download File View File

STREPTOCOCCAL SUPERANTIGEN (SSA) FROM STREPTOCOCCUS PYOGENES

Sundberg, E., Jardetzky, T.

(1999) Nat Struct Biol 6: 123-129

Released	1998-10-14
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Streptococcus pyogenes
Macromolecule	PROTEIN (STREPTOCOCCAL SUPERANTIGEN) (protein)

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1DKI \| pdb_00001dki	Download File View File

CRYSTAL STRUCTURE OF THE ZYMOGEN FORM OF STREPTOCOCCAL PYROGENIC EXOTOXIN B ACTIVE SITE (C47S) MUTANT

Kagawa, T.F., Cooney, J.C., Baker, H.M., McSweeney, S., Liu, M., Gubba, S., Musser, J.M., Baker, E.N.

(2000) Proc Natl Acad Sci U S A 97: 2235-2240

Released	2000-03-01
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Streptococcus pyogenes
Macromolecule	PYROGENIC EXOTOXIN B ZYMOGEN (protein)
Unique Ligands	SO4

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1DLI \| pdb_00001dli	Download File View File

THE FIRST STRUCTURE OF UDP-GLUCOSE DEHYDROGENASE (UDPGDH) REVEALS THE CATALYTIC RESIDUES NECESSARY FOR THE TWO-FOLD OXIDATION

Campbell, R.E., Mosimann, S.C., van de Rijn, I., Tanner, M.E., Strynadka, N.C.J.

(2000) Biochemistry 39: 7012-7023

Released	2000-05-31
Method	X-RAY DIFFRACTION 2.31 Å
Organisms	Streptococcus pyogenes
Macromolecule	UDP-GLUCOSE DEHYDROGENASE (protein)
Unique Ligands	GOL, NAD, SO4, UDX

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1DLJ \| pdb_00001dlj	Download File View File

THE FIRST STRUCTURE OF UDP-GLUCOSE DEHYDROGENASE (UDPGDH) REVEALS THE CATALYTIC RESIDUES NECESSARY FOR THE TWO-FOLD OXIDATION

Campbell, R.E., Mosimann, S.C., van de Rijn, I., Tanner, M.E., Strynadka, N.C.J.

(2000) Biochemistry 39: 7012-7023

Released	2000-05-31
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Streptococcus pyogenes
Macromolecule	UDP-GLUCOSE DEHYDROGENASE (protein)
Unique Ligands	GOL, NAI, SO4, UGA

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1ET6 \| pdb_00001et6	Download File View File

CRYSTAL STRUCTURE OF THE SUPERANTIGEN SMEZ-2 FROM STREPTOCOCCUS PYOGENES

Arcus, V.L., Proft, T., Sigrell, J.A., Baker, H.M., Fraser, J.D., Baker, E.N.

(2000) J Mol Biology 299: 157-168

Released	2000-05-10
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Streptococcus pyogenes
Macromolecule	SUPERANTIGEN SMEZ-2 (protein)

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1ET9 \| pdb_00001et9	Download File View File

CRYSTAL STRUCTURE OF THE SUPERANTIGEN SPE-H FROM STREPTOCOCCUS PYOGENES

Arcus, V.L., Proft, T., Sigrell, J.A., Baker, H.M., Fraser, J.D., Baker, E.N.

(2000) J Mol Biology 299: 157-168

Released	2000-04-26
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Streptococcus pyogenes
Macromolecule	SUPERANTIGEN SPE-H (protein)

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1EU3 \| pdb_00001eu3	Download File View File

CRYSTAL STRUCTURE OF THE SUPERANTIGEN SMEZ-2 (ZINC BOUND) FROM STREPTOCOCCUS PYOGENES

Arcus, V.L., Proft, T., Sigrell, J.A., Baker, H.M., Fraser, J.D., Baker, E.N.

(2000) J Mol Biology 299: 157-168

Released	2000-04-26
Method	X-RAY DIFFRACTION 1.68 Å
Organisms	Streptococcus pyogenes
Macromolecule	SUPERANTIGEN SMEZ-2 (protein)
Unique Ligands	K, PO4, ZN

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1EU4 \| pdb_00001eu4	Download File View File

CRYSTAL STRUCTURE OF THE SUPERANTIGEN SPE-H (ZINC BOUND) FROM STREPTOCOCCUS PYOGENES

Arcus, V.L., Proft, T., Sigrell, J.A., Baker, H.M., Fraser, J.D., Baker, E.N.

(2000) J Mol Biology 299: 157-168

Released	2000-04-26
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Streptococcus pyogenes
Macromolecule	SUPERANTIGEN SPE-H (protein)
Unique Ligands	ZN

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1GVN \| pdb_00001gvn	Download File View File

Crystal Structure of the Plasmid Maintenance System epsilon/zeta: Meachnism of toxin inactivation and toxin function

Meinhart, A., Alonso, J.C., Straeter, N., Saenger, W.

(2003) Proc Natl Acad Sci U S A 100: 1661

Released	2003-01-29
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Streptococcus pyogenes
Macromolecule	EPSILON (protein) ZETA (protein)
Unique Ligands	SO4

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1HA5 \| pdb_00001ha5	Download File View File

Structural features of a zinc-binding site in the superantigen streptococcal pyrogenic exotoxin A (SpeA1): implications for MHC class II recognition.

Baker, M.D., Gutman, D.M., Papageorgiou, A.C., Collins, C.M., Acharya, K.R.

(2001) Protein Sci 10: 1268

Released	2002-04-03
Method	X-RAY DIFFRACTION 2.82 Å
Organisms	Streptococcus pyogenes
Macromolecule	STREPTOCOCCAL PYOGENIC EXOTOXIN A1 (protein)
Unique Ligands	ZN

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1HQR \| pdb_00001hqr	Download File View File

CRYSTAL STRUCTURE OF A SUPERANTIGEN BOUND TO THE HIGH-AFFINITY, ZINC-DEPENDENT SITE ON MHC CLASS II

Li, Y., Li, H., Dimasi, N., Schlievert, P., Mariuzza, R.

(2001) Immunity 14: 93-104

Released	2001-01-03
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Homo sapiens Streptococcus pyogenes
Macromolecule	HLA-DR ALPHA CHAIN (protein) HLA-DR BETA CHAIN (protein) MYELIN BASIC PROTEIN (protein) STREPTOCOCCAL PYROGENIC EXOTOXIN C (protein)
Unique Ligands	ZN

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1I5K \| pdb_00001i5k	Download File View File

STRUCTURE AND BINDING DETERMINANTS OF THE RECOMBINANT KRINGLE-2 DOMAIN OF HUMAN PLASMINOGEN TO AN INTERNAL PEPTIDE FROM A GROUP A STREPTOCOCCAL SURFACE PROTEIN

Rios-Steiner, J.L., Schenone, M., Mochalkin, I., Tulinsky, A., Castellino, F.J.

(2001) J Mol Biology 308: 705-719

Released	2001-08-01
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens Streptococcus pyogenes
Macromolecule	M PROTEIN (protein) PLASMINOGEN (protein)

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1IRQ \| pdb_00001irq	Download File View File

Crystal structure of omega transcriptional repressor at 1.5A resolution

Murayama, K., Orth, P., De La Hoz, A.B., Alonso, J.C., Saenger, W.

(2001) J Mol Biology 314: 789-796

Released	2001-12-12
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Streptococcus pyogenes
Macromolecule	omega transcriptional repressor (protein)

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1KTK \| pdb_00001ktk	Download File View File

Complex of Streptococcal pyrogenic enterotoxin C (SpeC) with a human T cell receptor beta chain (Vbeta2.1)

Sundberg, E.J., Li, H., Llera, A.S., McCormick, J.K., Tormo, J., Karjalainen, K., Schlievert, P.M., Mariuzza, R.A.

(2002) Structure 10: 687-699

Released	2002-06-07
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens Streptococcus pyogenes
Macromolecule	Exotoxin type C (protein) T-cell receptor beta chain (protein)

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1L0X \| pdb_00001l0x	Download File View File

TCR beta chain complexed with streptococcal superantigen SpeA

Li, H., Sundberg, E.J., Mariuzza, R.A.

(2002) Structure 10: 687-699

Released	2002-04-03
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Mus musculus Streptococcus pyogenes
Macromolecule	14.3.d T cell receptor beta chain (protein) Exotoxin type A (protein)
Unique Ligands	GOL

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1L0Y \| pdb_00001l0y	Download File View File

T cell receptor beta chain complexed with superantigen SpeA soaked with zinc

Li, H., Sundberg, E.J., Mariuzza, R.A.

(2002) Structure 10: 687-699

Released	2002-04-03
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Mus musculus Streptococcus pyogenes
Macromolecule	14.3.d T cell receptor beta chain (protein) Exotoxin type A (protein)
Unique Ligands	GOL, ZN

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1PG6 \| pdb_00001pg6	Download File View File

X-Ray Crystal Structure of Protein SPYM3_0169 from Streptococcus pyogenes. Northeast Structural Genomics Consortium Target DR2.

Kuzin, A., Lee, I., Edstrom, W., Xiao, R., Acton, T., Rost, B., Montelione, G., Hunt, J., Tong, L., Northeast Structural Genomics Consortium (NESG)

(2003) To be published

Released	2003-12-02
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Streptococcus pyogenes MGAS8232
Macromolecule	Hypothetical protein SpyM3_0169 (protein)
Unique Ligands	CA

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1PVJ \| pdb_00001pvj	Download File View File

Crystal structure of the Streptococcal pyrogenic exotoxin B (SpeB)- inhibitor complex

Ziomek, E., Sivaraman, J., Doran, J., Menard, R., Cygler, M.

To be published

Released	2004-09-28
Method	X-RAY DIFFRACTION 3 Å
Organisms	Streptococcus pyogenes
Macromolecule	pyrogenic exotoxin B (protein)
Unique Ligands	ZFB

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1R5J \| pdb_00001r5j	Download File View File

Crystal Structure of a Phosphotransacetylase from Streptococcus pyogenes

Xu, Q.S., Shin, D.H., Pufan, R., Yokota, H., Kim, R., Kim, S.H., Berkeley Structural Genomics Center (BSGC)

(2004) Proteins 55: 479-481

Released	2004-04-13
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Streptococcus pyogenes
Macromolecule	putative phosphotransacetylase (protein)

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1S7O \| pdb_00001s7o	Download File View File

Crystal structure of putative DNA binding protein SP_1288 from Streptococcus pygenes

Oganesyan, V., Pufan, R., DeGiovanni, A., Yokota, H., Kim, R., Kim, S.-H., Berkeley Structural Genomics Center (BSGC)

(2004) Acta Crystallogr D Biol Crystallogr 60: 1266-1271

Released	2004-06-29
Method	X-RAY DIFFRACTION 2.31 Å
Organisms	Streptococcus pyogenes serotype M3
Macromolecule	Hypothetical UPF0122 protein SPy1201/SpyM3_0842/SPs1042/spyM18_1152 (protein)