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233,249 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Enzyme Classification Number = 3.4.24.40

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Search Summary

This query matches 27 Structures.

Refinements

Structure Determination Methodology

experimental (27)

Scientific Name of Source Organism

	Dickeya chrysanthemi (10)
	Pseudomonas sp. 'TAC II 18 (7)
	Serratia marcescens (4)
	Pseudomonas aeruginosa (3)
	synthetic construct (2)
	Pseudomonas (1)
	Pseudomonas aeruginosa PAO1 (1)
	Serratia (1)
	Serratia sp. E-15 (1)
	unidentified (1)

Taxonomy

	Bacteria (27)
	other sequences (2)
	unclassified sequences (1)

Experimental Method

X-RAY DIFFRACTION (27)

Polymer Entity Type

Protein (27)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (11)
	2.0 - 2.5 (13)
	2.5 - 3.0 (2)

Release Date

	1995 - 1999 (6)
	2000 - 2004 (14)
	2005 - 2009 (4)
	2010 - 2014 (2)
	2015 - 2019 (1)

Enzyme Classification Name

Hydrolases (27)

Symmetry Type

	Asymmetric (25)
	Cyclic (9)

SCOP Classification

	All beta proteins (25)
	Alpha and beta proteins (a+b) (25)
	Artifacts (1)

AllSelected

1 to 25 of 27 Structures

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1AF0 \| pdb_00001af0	Download File View File

SERRATIA PROTEASE IN COMPLEX WITH INHIBITOR

Baumann, U.

To be published

Released	1998-03-25
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Serratia marcescens
Macromolecule	SERRATIA PROTEASE (protein)
Unique Ligands	0Z9, CA, ZN

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1AKL \| pdb_00001akl	Download File View File

ALKALINE PROTEASE FROM PSEUDOMONAS AERUGINOSA IFO3080

Miyatake, H., Hata, Y., Fujii, T., Hamada, K., Morihara, K., Katsube, Y.

(1995) J Biochem 118: 474-479

Released	1996-03-08
Method	X-RAY DIFFRACTION 2 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	ALKALINE PROTEASE (protein)
Unique Ligands	CA, ZN

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1G9K \| pdb_00001g9k	Download File View File

CRYSTAL STRUCTURE OF A PSYCHROPHILIC ALKALINE PROTEASE FROM PSEUDOMONAS TAC II 18

Aghajari, N., Haser, R.

(2003) Proteins 50: 636-647

Released	2003-02-14
Method	X-RAY DIFFRACTION 1.96 Å
Organisms	Pseudomonas
Macromolecule	SERRALYSIN (protein)
Unique Ligands	CA, SO4, ZN

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1GO7 \| pdb_00001go7	Download File View File

The metzincin's methionine: PrtC M226C-E189K double mutant

Hege, T.

(2001) J Biological Chem 276: 35087

Released	2002-10-17
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Dickeya chrysanthemi
Macromolecule	PROTEASE C (protein)
Unique Ligands	CA, PO4, ZN

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1GO8 \| pdb_00001go8	Download File View File

The metzincin's methionine: PrtC M226L mutant

Baumann, U.

(2001) J Biological Chem 276: 35087

Released	2002-10-17
Method	X-RAY DIFFRACTION 2 Å
Organisms	Dickeya chrysanthemi
Macromolecule	PROTEASE C (protein)
Unique Ligands	CA, PO4, ZN

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1H71 \| pdb_00001h71	Download File View File

Psychrophilic Protease from Pseudoalteromonas 'TAC II 18'

Villeret, V., Van Petegem, F., Aghajari, N., Chessa, J.-P., Gerday, C., Haser, R., Van Beeumen, J.

(2003) Proteins 50: 636

Released	2003-02-13
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Pseudomonas sp. 'TAC II 18
Macromolecule	SERRALYSIN (protein)
Unique Ligands	CA, ZN

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1JIW \| pdb_00001jiw	Download File View File

Crystal structure of the APR-APRin complex

Hege, T., Feltzer, R.E., Gray, R.D., Baumann, U.

(2001) J Biological Chem 276: 35087-35092

Released	2001-08-15
Method	X-RAY DIFFRACTION 1.74 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	ALKALINE METALLOPROTEINASE (protein) PROTEINASE INHIBITOR (protein)
Unique Ligands	CA, ZN

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1K7G \| pdb_00001k7g	Download File View File

PrtC from Erwinia chrysanthemi

Hege, T., Baumann, U.

(2001) J Mol Biology 314: 187-193

Released	2002-10-19
Method	X-RAY DIFFRACTION 2 Å
Organisms	Dickeya chrysanthemi
Macromolecule	secreted protease C (protein)
Unique Ligands	CA, PO4, ZN

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1K7I \| pdb_00001k7i	Download File View File

PrtC from Erwinia chrysanthemi: Y228F mutant

Baumann, U., Hege, T.

(2001) J Mol Biology 314: 187-193

Released	2002-10-19
Method	X-RAY DIFFRACTION 1.59 Å
Organisms	Dickeya chrysanthemi
Macromolecule	secreted protease C (protein)
Unique Ligands	CA, ZN

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1K7Q \| pdb_00001k7q	Download File View File

PrtC from Erwinia chrysanthemi: E189A mutant

Baumann, U., Hege, T.

(2001) J Mol Biology 314: 187-193

Released	2002-10-20
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Dickeya chrysanthemi
Macromolecule	SECRETED PROTEASE C (protein)
Unique Ligands	CA, ZN

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1KAP \| pdb_00001kap	Download File View File

THREE-DIMENSIONAL STRUCTURE OF THE ALKALINE PROTEASE OF PSEUDOMONAS AERUGINOSA: A TWO-DOMAIN PROTEIN WITH A CALCIUM BINDING PARALLEL BETA ROLL MOTIF

Baumann, U., Wu, S., Flaherty, K.M., Mckay, D.B.

(1993) EMBO J 12: 3357-3364

Released	1995-10-15
Method	X-RAY DIFFRACTION 1.64 Å
Organisms	Pseudomonas aeruginosa PAO1
Macromolecule	ALKALINE PROTEASE (protein) TETRAPEPTIDE (GLY SER ASN SER) (protein)
Unique Ligands	CA, ZN

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1O0Q \| pdb_00001o0q	Download File View File

Crystal structure of a cold adapted alkaline protease from Pseudomonas TAC II 18, co-crystallized with 1 mM EDTA

Ravaud, S., Gouet, P., Haser, R., Aghajari, N.

(2003) J Bacteriol 185: 4195-4203

Released	2003-07-15
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Pseudomonas sp. 'TAC II 18
Macromolecule	serralysin (protein)
Unique Ligands	CA, SO4

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1O0T \| pdb_00001o0t	Download File View File

CRYSTAL STRUCTURE OF A COLD ADAPTED ALKALINE PROTEASE FROM PSEUDOMONAS TAC II 18, CO-CRYSTALLIZED WITH 5 mM EDTA (5 DAYS)

Ravaud, S., Gouet, P., Haser, R., Aghajari, N.

(2003) J Bacteriol 185: 4195-4203

Released	2003-07-15
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Pseudomonas sp. 'TAC II 18
Macromolecule	serralysin (protein)
Unique Ligands	CA, SO4

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1OM6 \| pdb_00001om6	Download File View File

CRYSTAL STRUCTURE OF A COLD ADAPTED ALKALINE PROTEASE FROM PSEUDOMONAS TAC II 18, CO-CRYSTALLIZED WITH 5mM EDTA (2 MONTHS)

Ravaud, S., Gouet, P., Haser, R., Aghajari, N.

(2003) J Bacteriol 185: 4195-4203

Released	2003-07-15
Method	X-RAY DIFFRACTION 2 Å
Organisms	Pseudomonas sp. 'TAC II 18
Macromolecule	serralysin (protein)
Unique Ligands	CA, SO4

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1OM7 \| pdb_00001om7	Download File View File

CRYSTAL STRUCTURE OF A COLD ADAPTED ALKALINE PROTEASE FROM PSEUDOMONAS TAC II 18, SOAKED IN 85 mM EDTA

Ravaud, S., Gouet, P., Haser, R., Aghajari, N.

(2003) J Bacteriol 185: 4195-4203

Released	2003-07-15
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Pseudomonas sp. 'TAC II 18
Macromolecule	SERRALYSIN (protein)
Unique Ligands	CA, SO4

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1OM8 \| pdb_00001om8	Download File View File

CRYSTAL STRUCTURE OF A COLD ADAPTED ALKALINE PROTEASE FROM PSEUDOMONAS TAC II 18, CO-CRYSTALLYZED WITH 10 mM EDTA

Ravaud, S., Gouet, P., Haser, R., Aghajari, N.

(2003) J Bacteriol 185: 4195-4203

Released	2003-07-15
Method	X-RAY DIFFRACTION 2 Å
Organisms	Pseudomonas sp. 'TAC II 18
Macromolecule	SERRALYSIN (protein)
Unique Ligands	CA, SO4

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1OMJ \| pdb_00001omj	Download File View File

CRYSTAL STRUCTURE OF A PSYCHROPHILIC ALKALINE PROTEASE FROM PSEUDOMONAS TAC II 18

Ravaud, S., Gouet, P., Haser, R., Aghajari, N.

(2003) J Bacteriol 185: 4195-4203

Released	2003-07-15
Method	X-RAY DIFFRACTION 2.38 Å
Organisms	Pseudomonas sp. 'TAC II 18
Macromolecule	SERRALYSIN (protein)
Unique Ligands	CA, SO4, ZN

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1SAT \| pdb_00001sat	Download File View File

CRYSTAL STRUCTURE OF THE 50 KDA METALLO PROTEASE FROM S. MARCESCENS

Baumann, U.

(1994) J Mol Biology 242: 244-251

Released	1995-07-31
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Serratia marcescens
Macromolecule	SERRATIA PROTEASE (protein)
Unique Ligands	CA, ZN

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1SMP \| pdb_00001smp	Download File View File

CRYSTAL STRUCTURE OF A COMPLEX BETWEEN SERRATIA MARCESCENS METALLO-PROTEASE AND AN INHIBITOR FROM ERWINIA CHRYSANTHEMI

Baumann, U., Bauer, M., Letoffe, S., Delepelaire, P., Wandersman, C.

(1995) J Mol Biology 248: 653-661

Released	1996-04-03
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Dickeya chrysanthemi Serratia marcescens
Macromolecule	ERWINIA CHRYSANTHEMI INHIBITOR (protein) SERRATIA METALLO PROTEINASE (protein)
Unique Ligands	CA, ZN

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1SRP \| pdb_00001srp	Download File View File

STRUCTURAL ANALYSIS OF SERRATIA PROTEASE

Hamada, K., Hiramatsu, H., Katsuya, Y., Hata, Y., Katsube, Y.

(1996) J Biochem 119: 844-851

Released	1995-02-14
Method	X-RAY DIFFRACTION 2 Å
Organisms	Serratia sp. E-15
Macromolecule	SERRALYSIN (protein)
Unique Ligands	CA, ZN

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3HB2 \| pdb_00003hb2	Download File View File

PrtC methionine mutants: M226I

Oberholzer, A.E., Bumann, M., Hege, T., Russo, S., Baumann, U.

(2009) Biol Chem 390: 875-881

Released	2009-08-04
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Dickeya chrysanthemi
Macromolecule	Secreted protease C (protein)
Unique Ligands	CA, CL, ZN

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3HBU \| pdb_00003hbu	Download File View File

PrtC methionine mutants: M226H DESY

Oberholzer, A.E., Bumann, M., Hege, T., Russo, S., Baumann, U.

(2009) Biol Chem 390: 875-881

Released	2009-07-21
Method	X-RAY DIFFRACTION 1.77 Å
Organisms	Dickeya chrysanthemi synthetic construct
Macromolecule	Secreted protease C (protein) peptide (protein)
Unique Ligands	CA, CL, ZN

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3HBV \| pdb_00003hbv	Download File View File

PrtC methionine mutants: M226A in-house

Oberholzer, A.E., Bumann, M., Hege, T., Russo, S., Baumann, U.

(2009) Biol Chem 390: 875-881

Released	2009-06-30
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Dickeya chrysanthemi unidentified
Macromolecule	Secreted protease C (protein) Uncharacterized peptide (protein)
Unique Ligands	CA, CL, ZN

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3HDA \| pdb_00003hda	Download File View File

PrtC methionine mutants: M226A_DESY

Oberholzer, A.E., Bumann, M., Hege, T., Russo, S., Baumann, U.

(2009) Biol Chem 390: 875-881

Released	2009-06-30
Method	X-RAY DIFFRACTION 2.131 Å
Organisms	Dickeya chrysanthemi synthetic construct
Macromolecule	Secreted protease C (protein) Uncharacterized peptide (protein)
Unique Ligands	CA, CL

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3VI1 \| pdb_00003vi1	Download File View File

Crystal structure of Pseudomonas aerginosa alkaline protease complexed with Substance P(1-6)

Matoba, K., Harada, S.

To be published

Released	2012-09-19
Method	X-RAY DIFFRACTION 2 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	Alkaline metalloproteinase (protein) Substance P1-6, RPKPQQ (protein)
Unique Ligands	CA, ZN

1 to 25 of 27 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1AF0 | pdb_00001af0

1AKL | pdb_00001akl

1G9K | pdb_00001g9k

1GO7 | pdb_00001go7

1GO8 | pdb_00001go8

1H71 | pdb_00001h71

1JIW | pdb_00001jiw

1K7G | pdb_00001k7g

1K7I | pdb_00001k7i

1K7Q | pdb_00001k7q

1KAP | pdb_00001kap

1O0Q | pdb_00001o0q

1O0T | pdb_00001o0t

1OM6 | pdb_00001om6

1OM7 | pdb_00001om7

1OM8 | pdb_00001om8

1OMJ | pdb_00001omj

1SAT | pdb_00001sat

1SMP | pdb_00001smp

1SRP | pdb_00001srp

3HB2 | pdb_00003hb2

3HBU | pdb_00003hbu

3HBV | pdb_00003hbv

3HDA | pdb_00003hda

3VI1 | pdb_00003vi1