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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: PubMed ID = 12718892

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Search Summary

This query matches 86 Structures.

Refinements

Structure Determination Methodology

experimental (86)

Scientific Name of Source Organism

	Homo sapiens (85)
	Rattus norvegicus (1)

Taxonomy

	Eukaryota (86)
	Eukaryota (eukaryotes) (12)

Experimental Method

X-RAY DIFFRACTION (86)

Polymer Entity Type

	Protein (86)
	DNA (1)

Refinement Resolution (Å)

	1.5 - 2.0 (24)
	2.0 - 2.5 (32)
	2.5 - 3.0 (24)
	3.0 - 3.5 (6)

Release Date

	2000 - 2004 (2)
	2005 - 2009 (8)
	2010 - 2014 (13)
	2015 - 2019 (59)
	2020 - 2024 (4)

Enzyme Classification Name

Transferases (61)

Symmetry Type

	Asymmetric (85)
	Cyclic (3)
	Tetrahedral (2)

SCOP Classification

	All alpha proteins (22)
	Artifacts (9)

AllSelected

1 to 25 of 86 Structures

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1OSH \| pdb_00001osh	Download File View File

A Chemical, Genetic, and Structural Analysis of the nuclear bile acid receptor FXR

Downes, M., Verdecia, M.A., Roecker, A.J., Hughes, R., Hogenesch, J.B., Kast-Woelbern, H.R., Bowman, M.E., Ferrer, J.-L., Anisfeld, A.M., Edwards, P.A., Rosenfeld, J.M., Alvarez, J.G.A., Noel, J.P., Nicolaou, K.C., Evans, R.M.

(2003) Mol Cell 11: 1079-1092

Released	2003-09-23
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	Bile acid receptor (protein)
Unique Ligands	FEX

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1OT7 \| pdb_00001ot7	Download File View File

Structural Basis for 3-deoxy-CDCA Binding and Activation of FXR

Mi, L.Z., Devarakonda, S., Harp, J.M., Han, Q., Pellicciari, R., Willson, T.M., Khorasanizadeh, S., Rastinejad, F.

(2003) Mol Cell 11: 1093-1100

Released	2004-03-23
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Rattus norvegicus
Macromolecule	Bile Acid Receptor (protein) dodecamer peptide fragment of RPGR-interacting protein 1 (protein)
Unique Ligands	CHC, IU5

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3BEJ \| pdb_00003bej	Download File View File

Structure of human FXR in complex with MFA-1 and co-activator peptide

Soisson, S.M., Parthasarathy, G., Becker, J.W.

(2008) Proc Natl Acad Sci U S A 105: 5337-5342

Released	2008-03-18
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	Bile acid receptor (protein) Nuclear receptor coactivator 1 (protein)
Unique Ligands	MUF, YT3

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3DCT \| pdb_00003dct	Download File View File

FXR with SRC1 and GW4064

Williams, S.P., Madauss, K.P.

(2008) Bioorg Med Chem Lett 18: 4339-4343

Released	2008-08-12
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	Bile acid receptor (protein) Nuclear receptor coactivator 1 (protein)
Unique Ligands	064

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3DCU \| pdb_00003dcu	Download File View File

FXR with SRC1 and GSK8062

Williams, S.P., Madauss, K.P.

(2008) Bioorg Med Chem Lett 18: 4339-4343

Released	2008-08-12
Method	X-RAY DIFFRACTION 2.95 Å
Organisms	Homo sapiens
Macromolecule	Bile acid receptor (protein) Nuclear receptor coactivator 1 (protein)
Unique Ligands	O62

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3FLI \| pdb_00003fli	Download File View File

Discovery of XL335, a Highly Potent, Selective and Orally-Active Agonist of the Farnesoid X Receptor (FXR)

Foster, P.G., Stout, T.J.

(2009) J Med Chem 52: 904-907

Released	2009-12-22
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Bile acid receptor (protein)
Unique Ligands	33Y

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3FXV \| pdb_00003fxv	Download File View File

Identification of an N-oxide pyridine GW4064 analogue as a potent FXR agonist

Feng, S., Yang, M., He, Y., Chen, L., Zhang, Z., Wang, Z., Hong, D., Richter, H., Benson, G.M., Bleicher, K., Grether, U., Martin, R., Plancher, J.-M., Kuhn, B., Rudolph, M.G.

(2009) Bioorg Med Chem Lett 19: 2595-2598

Released	2009-04-14
Method	X-RAY DIFFRACTION 2.26 Å
Organisms	Homo sapiens
Macromolecule	12-meric peptide from Nuclear receptor coactivator 1 (protein) NR1H4 protein (protein)
Unique Ligands	643

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3GD2 \| pdb_00003gd2	Download File View File

isoxazole ligand bound to farnesoid X receptor (FXR)

Madauss, K.P., Williams, S.P., Deaton, D.N., Wisely, G.B., Mcfadyen, R.B.

(2009) Bioorg Med Chem Lett 19: 2969-2973

Released	2009-07-07
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Homo sapiens
Macromolecule	Bile acid receptor (protein) activator peptide (protein)
Unique Ligands	708

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3HC5 \| pdb_00003hc5	Download File View File

FXR with SRC1 and GSK826

Williams, S.P., Madauss, K.P.

(2009) Bioorg Med Chem Lett 19: 4733-4739

Released	2009-07-21
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens
Macromolecule	Bile acid receptor (protein) Nuclear receptor coactivator 1 (protein)
Unique Ligands	82X, SO4

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3HC6 \| pdb_00003hc6	Download File View File

FXR with SRC1 and GSK088

Williams, S.P., Madauss, K.P.

(2009) Bioorg Med Chem Lett 19: 4733-4739

Released	2009-07-21
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Homo sapiens
Macromolecule	Bile acid receptor (protein) Nuclear receptor coactivator 1 (protein)
Unique Ligands	088, SO4

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3L1B \| pdb_00003l1b	Download File View File

Complex Structure of FXR Ligand-binding domain with a tetrahydroazepinoindole compound

Xu, W., Lundquist, J.T.

(2010) J Med Chem 53: 1774-1787

Released	2010-03-02
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	Farnesoid X receptor (protein)
Unique Ligands	635

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3OKH \| pdb_00003okh	Download File View File

Crystal structure of human FXR in complex with 2-(4-chlorophenyl)-1-[(1S)-1-cyclohexyl-2-(cyclohexylamino)-2-oxoethyl]-1H-benzimidazole-6-carboxylic acid

Rudolph, M.G.

(2010) Bioorg Med Chem Lett 21: 191-194

Released	2010-12-29
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	Bile acid receptor (protein) peptide of Nuclear receptor coactivator 1 (protein)
Unique Ligands	OKH

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3OKI \| pdb_00003oki	Download File View File

Crystal structure of human FXR in complex with (2S)-2-[2-(4-chlorophenyl)-1H-benzimidazol-1-yl]-N,2-dicyclohexylethanamide

Rudolph, M.G.

(2010) Bioorg Med Chem Lett 21: 191-194

Released	2010-12-29
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Bile acid receptor (protein) peptide of Nuclear receptor coactivator 1 (protein)
Unique Ligands	OKI

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3OLF \| pdb_00003olf	Download File View File

Crystal structure of human FXR in complex with 4-({(2S)-2-[2-(4-chlorophenyl)-5,6-difluoro-1H-benzimidazol-1-yl]-2-cyclohexylacetyl}amino)-3-methylbenzoic acid

Rudolph, M.G.

(2011) Bioorg Med Chem Lett 21: 1134-1140

Released	2011-01-19
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	Bile acid receptor (protein) peptide of Nuclear receptor coactivator 1 (protein)
Unique Ligands	OLF

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3OMK \| pdb_00003omk	Download File View File

Crystal structure of human FXR in complex with (2S)-2-[2-(4-chlorophenyl)-5,6-difluoro-1H-benzimidazol-1-yl]-2-cyclohexyl-N-(2-methylphenyl)ethanamide

Rudolph, M.G.

(2011) Bioorg Med Chem Lett 21: 1134-1140

Released	2011-01-19
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	Bile acid receptor (protein) peptide of Nuclear receptor coactivator 1 (protein)
Unique Ligands	OMK

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3OMM \| pdb_00003omm	Download File View File

Crystal structure of human FXR in complex with 4-({(2S)-2-[2-(4-chlorophenyl)-5,6-difluoro-1H-benzimidazol-1-yl]-2-cyclohexylacetyl}amino)-3-fluorobenzoic acid

Rudolph, M.G.

(2011) Bioorg Med Chem Lett 21: 1134-1140

Released	2011-01-19
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	Bile acid receptor (protein) peptide of Nuclear receptor coactivator 1 (protein)
Unique Ligands	OMM

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3OOF \| pdb_00003oof	Download File View File

Crystal structure of human FXR in complex with 4-({(2S)-2-[2-(4-chlorophenyl)-5,6-difluoro-1H-benzimidazol-1-yl]-2-cyclohexylacetyl}amino)benzoic acid

Rudolph, M.G.

(2011) Bioorg Med Chem Lett 21: 1134-1140

Released	2011-01-19
Method	X-RAY DIFFRACTION 2.29 Å
Organisms	Homo sapiens
Macromolecule	Bile acid receptor (protein) peptide of Nuclear receptor coactivator 1 (protein)
Unique Ligands	OOF

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3OOK \| pdb_00003ook	Download File View File

Crystal structure of human FXR in complex with 4-({(2S)-2-[2-(4-chlorophenyl)-5,6-difluoro-1H-benzimidazol-1-yl]-2-cyclohexylacetyl}amino)-3,5-difluorobenzoic acid

Rudolph, M.G.

(2011) Bioorg Med Chem Lett 21: 1134-1140

Released	2011-01-19
Method	X-RAY DIFFRACTION 2.29 Å
Organisms	Homo sapiens
Macromolecule	Bile acid receptor (protein) peptide of Nuclear receptor coactivator 1 (protein)
Unique Ligands	OOK

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3P88 \| pdb_00003p88	Download File View File

FXR bound to isoquinolinecarboxylic acid

Madauss, K.P., Williams, S.P., Deaton, D.N.

(2011) Bioorg Med Chem Lett 21: 1206-1213

Released	2011-08-31
Method	X-RAY DIFFRACTION 2.95 Å
Organisms	Homo sapiens
Macromolecule	Farnesoid X receptor (protein) Nuclear receptor coactivator 1 (protein)
Unique Ligands	P88, SO4

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3P89 \| pdb_00003p89	Download File View File

FXR bound to a quinolinecarboxylic acid

Madauss, K.P., Williams, S.P., Deaton, D.N.

(2011) Bioorg Med Chem Lett 21: 1206-1213

Released	2011-08-31
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Farnesoid X receptor (protein) Nuclear receptor coactivator 1 (protein)
Unique Ligands	89P, SO4

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3RUT \| pdb_00003rut	Download File View File

FXR with SRC1 and GSK359

Williams, S.P., Madauss, K.P.

(2011) Bioorg Med Chem Lett 21: 6154-6160

Released	2011-09-21
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	Bile acid receptor (protein) Nuclear receptor coactivator 1 (protein)
Unique Ligands	59G, SO4

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3RUU \| pdb_00003ruu	Download File View File

FXR with SRC1 and GSK237

Williams, S.P., Madauss, K.P.

(2011) Bioorg Med Chem Lett 21: 6154-6160

Released	2011-09-21
Method	X-RAY DIFFRACTION 2.502 Å
Organisms	Homo sapiens
Macromolecule	Bile acid receptor (protein) Nuclear receptor coactivator 1 (protein)
Unique Ligands	37G, SO4

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3RVF \| pdb_00003rvf	Download File View File

FXR with SRC1 and GSK2034

Williams, S.P., Madauss, K.P.

(2011) Bioorg Med Chem Lett 21: 6154-6160

Released	2011-09-21
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Homo sapiens
Macromolecule	Bile acid receptor (protein) Nuclear receptor coactivator 1 (protein)
Unique Ligands	034, SO4

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4OIV \| pdb_00004oiv	Download File View File

Structural basis for small molecule NDB as a selective antagonist of FXR

Xu, X., Chen, L., Hu, L., Shen, X.

(2015) J Biological Chem 290: 19888-19899

Released	2015-03-25
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	Bile acid receptor (protein)
Unique Ligands	XX9

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4QE8 \| pdb_00004qe8	Download File View File

FXR with DM175 and NCoA-2 peptide

Kudlinzki, D., Merk, D., Linhard, V.L., Saxena, K., Sreeramulu, S., Nilsson, E., Dekker, N., Wissler, L., Bamberg, K., Schubert-Zsilavecz, M., Schwalbe, H.

To be published

Released	2015-08-12
Method	X-RAY DIFFRACTION 2.62 Å
Organisms	Homo sapiens
Macromolecule	Bile acid receptor (protein) Nuclear receptor coactivator 2 (protein)
Unique Ligands	31D, EDO, MRD

1 to 25 of 86 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1OSH | pdb_00001osh

1OT7 | pdb_00001ot7

3BEJ | pdb_00003bej

3DCT | pdb_00003dct

3DCU | pdb_00003dcu

3FLI | pdb_00003fli

3FXV | pdb_00003fxv

3GD2 | pdb_00003gd2

3HC5 | pdb_00003hc5

3HC6 | pdb_00003hc6

3L1B | pdb_00003l1b

3OKH | pdb_00003okh

3OKI | pdb_00003oki

3OLF | pdb_00003olf

3OMK | pdb_00003omk

3OMM | pdb_00003omm

3OOF | pdb_00003oof

3OOK | pdb_00003ook

3P88 | pdb_00003p88

3P89 | pdb_00003p89

3RUT | pdb_00003rut

3RUU | pdb_00003ruu

3RVF | pdb_00003rvf

4OIV | pdb_00004oiv

4QE8 | pdb_00004qe8