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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Keywords HAS EXACT PHRASE "BIOSYNTHETIC PROTEIN/TRANSFERASE"

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This query matches 27 Structures.

Refinements

Structure Determination Methodology

experimental (27)

Scientific Name of Source Organism

	Saccharomyces cerevisiae (9)
	Pseudomonas aeruginosa (8)
	Methanothermobacter thermautotrophicus str. Delta H (5)
	Bacillus cereus (4)
	Neisseria meningitidis serogroup B (4)
	Homo sapiens (2)
	Saccharopolyspora erythraea (2)
	Dictyostelium discoideum AX4 (1)
	Streptomyces sviceus (1)
	Yersinia pestis (1)

Taxonomy

	Bacteria (20)
	Eukaryota (12)
	Archaea (5)

Experimental Method

X-RAY DIFFRACTION (27)

Polymer Entity Type

Protein (27)

Refinement Resolution (Å)

	1.5 - 2.0 (11)
	2.0 - 2.5 (5)
	2.5 - 3.0 (7)
	3.0 - 3.5 (4)

Release Date

	2005 - 2009 (16)
	2015 - 2019 (4)
	2020 - 2024 (7)

Enzyme Classification Name

	Transferases (21)
	Hydrolases (8)
	Lyases (1)

Symmetry Type

	Asymmetric (10)
	Cyclic (17)
	Dihedral (1)

SCOP Classification

	Alpha and beta proteins (a+b) (8)
	Alpha and beta proteins (a/b) (15)
	All beta proteins (12)
	Artifacts (5)

AllSelected

1 to 25 of 27 Structures

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1ZM2 \| pdb_00001zm2	Download File View File

Structure of ADP-ribosylated eEF2 in complex with catalytic fragment of ETA

Joergensen, R., Merrill, A.R., Yates, S.P., Marquez, V.E., Schwan, A.L., Boesen, T., Andersen, G.R.

(2005) Nature 436: 979-984

Released	2005-05-24
Method	X-RAY DIFFRACTION 3.07 Å
Organisms	Pseudomonas aeruginosa Saccharomyces cerevisiae
Macromolecule	Elongation factor 2 (protein) Exotoxin A (protein)
Unique Ligands	APR

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1ZM3 \| pdb_00001zm3	Download File View File

Structure of the apo eEF2-ETA complex

Joergensen, R., Merrill, A.R., Yates, S.P., Marquez, V.E., Schwan, A.L., Boesen, T., Andersen, G.R.

(2005) Nature 436: 979-984

Released	2005-05-24
Method	X-RAY DIFFRACTION 3.07 Å
Organisms	Pseudomonas aeruginosa Saccharomyces cerevisiae
Macromolecule	Elongation factor 2 (protein) exotoxin A (protein)

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1ZM4 \| pdb_00001zm4	Download File View File

Structure of the eEF2-ETA-bTAD complex

Joergensen, R., Merrill, A.R., Yates, S.P., Marquez, V.E., Schwan, A.L., Boesen, T., Andersen, G.R.

(2005) Nature 436: 979-984

Released	2005-05-24
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Pseudomonas aeruginosa Saccharomyces cerevisiae
Macromolecule	Elongation factor 2 (protein) exotoxin A (protein)
Unique Ligands	TAD

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1ZM9 \| pdb_00001zm9	Download File View File

Structure of eEF2-ETA in complex with PJ34

Joergensen, R., Merrill, A.R., Yates, S.P., Marquez, V.E., Schwan, A.L., Boesen, T., Andersen, G.R.

(2005) Nature 436: 979-984

Released	2005-05-24
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Pseudomonas aeruginosa Saccharomyces cerevisiae
Macromolecule	Elongation factor 2 (protein) exotoxin A (protein)
Unique Ligands	P34

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2H84 \| pdb_00002h84	Download File View File

Crystal Structure of the C-terminal Type III Polyketide Synthase (PKS III) Domain of 'Steely1' (a Type I/III PKS Hybrid from Dictyostelium)

Austin, M.B., Saito, T., Bowman, M.E., Haydock, S., Kato, A., Moore, B.S., Kay, R.R., Noel, J.P.

(2006) Nat Chem Biol 2: 494-502

Released	2006-08-22
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Dictyostelium discoideum AX4
Macromolecule	Steely1 (protein)
Unique Ligands	P6G

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2ZIT \| pdb_00002zit	Download File View File

Structure of the eEF2-ExoA-NAD+ complex

Jorgensen, R., Merrill, A.R.

(2008) EMBO Rep 9: 802-809

Released	2008-06-24
Method	X-RAY DIFFRACTION 3 Å
Organisms	Pseudomonas aeruginosa Saccharomyces cerevisiae
Macromolecule	Elongation factor 2 (protein) Exotoxin A (protein)
Unique Ligands	NAD

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3B78 \| pdb_00003b78	Download File View File

Structure of the eEF2-ExoA(R551H)-NAD+ complex

Jorgensen, R., Merrill, A.R.

(2008) EMBO Rep 9: 802-809

Released	2008-06-17
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Pseudomonas aeruginosa Saccharomyces cerevisiae
Macromolecule	Elongation factor 2 (protein) Exotoxin A (protein)
Unique Ligands	NAD

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3B82 \| pdb_00003b82	Download File View File

Structure of the eEF2-ExoA(E546H)-NAD+ complex

Jorgensen, R., Merrill, A.R.

(2008) EMBO Rep 9: 802-809

Released	2008-06-17
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Pseudomonas aeruginosa Saccharomyces cerevisiae
Macromolecule	Elongation factor 2 (protein) Exotoxin A (protein)
Unique Ligands	NAD

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3B8H \| pdb_00003b8h	Download File View File

Structure of the eEF2-ExoA(E546A)-NAD+ complex

Jorgensen, R., Merrill, A.R.

(2008) EMBO Rep 9: 802-809

Released	2008-06-17
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Pseudomonas aeruginosa Saccharomyces cerevisiae
Macromolecule	Elongation factor 2 (protein) Exotoxin A (protein)
Unique Ligands	NAD

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3F4N \| pdb_00003f4n	Download File View File

Crystal Structure of Pyridoxal Phosphate Biosynthetic Protein PdxJ from Yersinia pestis

Kim, Y., Maltseva, N., Stam, J., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

(2008) To be published

Released	2008-11-25
Method	X-RAY DIFFRACTION 2.402 Å
Organisms	Yersinia pestis
Macromolecule	Pyridoxine 5'-phosphate synthase (protein)
Unique Ligands	PXP, SO4

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3FEM \| pdb_00003fem	Download File View File

Structure of the synthase subunit Pdx1.1 (Snz1) of PLP synthase from Saccharomyces cerevisiae

Strohmeier, M., Windeisen, V., Sinning, I., Tews, I.

(2009) FEBS Lett 583: 2179-2186

Released	2009-06-16
Method	X-RAY DIFFRACTION 3.02 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Pyridoxine biosynthesis protein SNZ1 (protein)

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3FPE \| pdb_00003fpe	Download File View File

Crystal Structure of MtNAS in complex with thermonicotianamine

Dreyfus, C., Pignol, D., Arnoux, P.

(2009) Proc Natl Acad Sci U S A 106: 16180-16184

Released	2009-10-06
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Methanothermobacter thermautotrophicus str. Delta H
Macromolecule	Putative uncharacterized protein (protein)
Unique Ligands	BR, TNA

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3FPF \| pdb_00003fpf	Download File View File

Crystal Structure of MtNAS in complex with MTA and tNA

Dreyfus, C., Pignol, D., Arnoux, P.

(2009) Proc Natl Acad Sci U S A 106: 16180-16184

Released	2009-10-06
Method	X-RAY DIFFRACTION 1.66 Å
Organisms	Methanothermobacter thermautotrophicus str. Delta H
Macromolecule	Putative uncharacterized protein (protein)
Unique Ligands	BR, MTA, TNA

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3FPG \| pdb_00003fpg	Download File View File

Crystal Structure of E81Q mutant of MtNAS

Dreyfus, C., Pignol, D., Arnoux, P.

(2009) Proc Natl Acad Sci U S A 106: 16180-16184

Released	2009-10-06
Method	X-RAY DIFFRACTION 2 Å
Organisms	Methanothermobacter thermautotrophicus str. Delta H
Macromolecule	Putative uncharacterized protein (protein)
Unique Ligands	B3P, BR

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3FPH \| pdb_00003fph	Download File View File

Crystal Structure of E81Q mutant of MtNAS in complex with L-Glutamate

Dreyfus, C., Pignol, D., Arnoux, P.

(2009) Proc Natl Acad Sci U S A 106: 16180-16184

Released	2009-10-06
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Methanothermobacter thermautotrophicus str. Delta H
Macromolecule	Putative uncharacterized protein (protein)
Unique Ligands	GLU, NA

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3FPJ \| pdb_00003fpj	Download File View File

Crystal Structure of E81Q mutant of MtNAS in complex with S-ADENOSYLMETHIONINE

Dreyfus, C., Pignol, D., Arnoux, P.

(2009) Proc Natl Acad Sci U S A 106: 16180-16184

Released	2009-10-06
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Methanothermobacter thermautotrophicus str. Delta H
Macromolecule	Putative uncharacterized protein (protein)
Unique Ligands	B3P, BR, SAM

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6PPW \| pdb_00006ppw	Download File View File

Crystal structure of NeuB, an N-acetylneuraminate synthase from Neisseria meningitidis, in complex with magnesium and malate

Rosanally, A.Z., Junop, M.S., Berti, P.J.

(2019) Biochemistry 58: 4236-4245

Released	2019-10-02
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Neisseria meningitidis serogroup B
Macromolecule	N-acetylneuraminate synthase (protein)
Unique Ligands	MG, MLT

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6PPX \| pdb_00006ppx	Download File View File

Crystal structure of metal-free NeuB, an N-acetylneuraminate synthase from Neisseria meningitidis in complex with malate

Rosanally, A.Z., Junop, M.S., Berti, P.J.

(2019) Biochemistry 58: 4236-4245

Released	2019-10-02
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Neisseria meningitidis serogroup B
Macromolecule	N-acetylneuraminate synthase (protein)
Unique Ligands	MLT

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6PPY \| pdb_00006ppy	Download File View File

Crystal structure of NeuNAc oxime complexed with NeuB, an N-acetylneuraminate synthase from Neisseria meningitidis

Rosanally, A.Z., Junop, M.J., Berti, P.J.

(2019) Biochemistry 58: 4236-4245

Released	2019-10-02
Method	X-RAY DIFFRACTION 2 Å
Organisms	Neisseria meningitidis serogroup B
Macromolecule	N-acetylneuraminate synthase (protein)
Unique Ligands	OVY

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6PPZ \| pdb_00006ppz	Download File View File

Crystal structure of NeuB, an N-acetylneuraminate synthase from Neisseria meningitidis, in complex with manganese, inorganic phosphate, and N-acetylmannosamine (NeuB.Mn2+.Pi.ManNAc)

Berti, P.J., Junop, M.S.

(2019) Biochemistry 58: 4236-4245

Released	2019-10-02
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Neisseria meningitidis serogroup B
Macromolecule	N-acetylneuraminate synthase (protein)
Unique Ligands	MN, MN9, PO4

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7KZ3 \| pdb_00007kz3	Download File View File

Crystal structure of KabA from Bacillus cereus UW85 in complex with the internal aldimine

Prasertanan, T., Palmer, D.R.J., Sanders, D.A.R.

(2021) J Struct Biol 213: 107744-107744

Released	2021-05-26
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Bacillus cereus
Macromolecule	Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme (protein)
Unique Ligands	EDO, NA

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7KZ5 \| pdb_00007kz5	Download File View File

Crystal structure of KabA from Bacillus cereus UW85 in complex with the plp external aldimine adduct with kanosamine-6-phosphate

Prasertanan, T., Palmer, D.R.J., Sanders, D.A.R.

(2021) J Struct Biol 213: 107744-107744

Released	2021-05-26
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Bacillus cereus
Macromolecule	Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme (protein)
Unique Ligands	EDO, NA, O1G

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7KZ6 \| pdb_00007kz6	Download File View File

Crystal structure of KabA from Bacillus cereus UW85 with bound cofactor PMP

Prasertanan, T., Palmer, D.R.J., Sanders, D.A.R.

(2021) J Struct Biol 213: 107744-107744

Released	2021-05-26
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Bacillus cereus
Macromolecule	Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme (protein)
Unique Ligands	EDO, PMP

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7KZD \| pdb_00007kzd	Download File View File

Crystal structure of KabA from Bacillus cereus UW85 in complex with the reduced internal aldimine and with bound Glutarate

Prasertanan, T., Palmer, D.R.J., Sanders, D.A.R.

(2021) J Struct Biol 213: 107744-107744

Released	2021-05-26
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Bacillus cereus
Macromolecule	Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme (protein)
Unique Ligands	EDO, GUA, PLR

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7M0O \| pdb_00007m0o	Download File View File

DGT-28 EPSPS

Chekan, J.R., Nair, S.K.

(2021) J Agric Food Chem 69: 5096-5104

Released	2021-04-14
Method	X-RAY DIFFRACTION 1.62 Å
Organisms	Streptomyces sviceus
Macromolecule	3-phosphoshikimate 1-carboxyvinyltransferase (protein)
Unique Ligands	K, PO4

1 to 25 of 27 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1ZM2 | pdb_00001zm2

1ZM3 | pdb_00001zm3

1ZM4 | pdb_00001zm4

1ZM9 | pdb_00001zm9

2H84 | pdb_00002h84

2ZIT | pdb_00002zit

3B78 | pdb_00003b78

3B82 | pdb_00003b82

3B8H | pdb_00003b8h

3F4N | pdb_00003f4n

3FEM | pdb_00003fem

3FPE | pdb_00003fpe

3FPF | pdb_00003fpf

3FPG | pdb_00003fpg

3FPH | pdb_00003fph

3FPJ | pdb_00003fpj

6PPW | pdb_00006ppw

6PPX | pdb_00006ppx

6PPY | pdb_00006ppy

6PPZ | pdb_00006ppz

7KZ3 | pdb_00007kz3

7KZ5 | pdb_00007kz5

7KZ6 | pdb_00007kz6

7KZD | pdb_00007kzd

7M0O | pdb_00007m0o