RCSB PDB: Search

2AMQ \| pdb_00002amq	Download File View File

Crystal Structure Of SARS_CoV Mpro in Complex with an Inhibitor N3

Yang, H., Xue, X., Yang, K., Zhao, Q., Bartlam, M., Rao, Z.

(2005) PLoS Biol 3: 324-334

Released	2005-09-13
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Severe acute respiratory syndrome-related coronavirus synthetic construct
Macromolecule	3C-like proteinase (protein) N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE (protein)

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2HOB \| pdb_00002hob	Download File View File

Crystal structure of SARS-CoV main protease with authentic N and C-termini in complex with a Michael acceptor N3

Xue, X., Yang, H., Shen, W., Zhao, Q., Li, J., Rao, Z.

(2007) J Mol Biology 366: 965-975

Released	2007-04-03
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Severe acute respiratory syndrome-related coronavirus synthetic construct
Macromolecule	N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE (protein) Replicase polyprotein 1ab (protein)

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2Q6F \| pdb_00002q6f	Download File View File

Crystal structure of infectious bronchitis virus (IBV) main protease in complex with a Michael acceptor inhibitor N3

Xue, X.Y., Yang, H.T., Xue, F., Bartlam, M., Rao, Z.H.

(2008) J Virol 82: 2515-2527

Released	2008-02-12
Method	X-RAY DIFFRACTION 2 Å
Organisms	Infectious bronchitis virus synthetic construct
Macromolecule	Infectious bronchitis virus (IBV) main protease (protein) N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE (protein)

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3D23 \| pdb_00003d23	Download File View File

Main protease of HCoV-HKU1

Zhao, Q., Chen, C., Li, S., Zou, Y.

(2008) J Virol 82: 8647-8655

Released	2008-09-16
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Human coronavirus HKU1 (isolate N1) synthetic construct
Macromolecule	3C-like proteinase (protein) N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE (protein)

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3IWM \| pdb_00003iwm	Download File View File

The octameric SARS-CoV main protease

Zhong, N., Zhang, S., Xue, F., Lou, Z., Rao, Z., Xia, B.

(2010) Protein Cell 1: 371-383

Released	2010-07-21
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Severe acute respiratory syndrome-related coronavirus synthetic construct
Macromolecule	3C-like proteinase (protein) N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE (protein)

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5EU8 \| pdb_00005eu8	Download File View File

Structure of FIPV main protease in complex with dual inhibitors

Wang, F., Chen, C., Liu, X., Yang, K., Xu, X., Yang, H.

(2015) J Virol 90: 1910-1917

Released	2015-12-30
Method	X-RAY DIFFRACTION 2.447 Å
Organisms	Feline infectious peritonitis virus synthetic construct
Macromolecule	N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE (protein) main protease (protein)
Unique Ligands	EDO, ZN

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5GWY \| pdb_00005gwy	Download File View File

Structure of Main Protease from Human Coronavirus NL63: Insights for Wide Spectrum Anti-Coronavirus Drug Design

Wang, F., Chen, C., Tan, W., Yang, K., Yang, H.

(2016) Sci Rep 6: 22677-22677

Released	2017-09-20
Method	X-RAY DIFFRACTION 2.852 Å
Organisms	Human coronavirus NL63 synthetic construct
Macromolecule	N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE (protein) main protease (protein)

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5GWZ \| pdb_00005gwz	Download File View File

The structure of Porcine epidemic diarrhea virus main protease in complex with an inhibitor

Wang, F., Chen, C., Yang, K., Liu, X., Liu, H., Xu, Y., Chen, X., Liu, X., Cai, Y., Yang, H.

(2017) J Med Chem 60: 3212-3216

Released	2017-03-29
Method	X-RAY DIFFRACTION 2.444 Å
Organisms	Porcine epidemic diarrhea virus CV777 synthetic construct
Macromolecule	N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE (protein) PEDV main protease (protein)

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6JIJ \| pdb_00006jij	Download File View File

The Crystal Structure of Main Protease from Mouse Hepatitis Virus A59 in Complex with an inhibitor

Cui, W., Cui, S.S.

(2019) Biochem Biophys Res Commun 511: 794-799

Released	2019-04-24
Method	X-RAY DIFFRACTION 2.65 Å
Organisms	Murine hepatitis virus strain A59 synthetic construct
Macromolecule	02J-ALA-VAL-LEU-PJE-010 (protein) Replicative polyprotein 1ab (protein)

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6LU7 \| pdb_00006lu7	Download File View File

The crystal structure of COVID-19 main protease in complex with an inhibitor N3

Liu, X., Zhang, B., Jin, Z., Yang, H., Rao, Z.

(2020) Nature 582: 289-293

Released	2020-02-05
Method	X-RAY DIFFRACTION 2.16 Å
Organisms	Severe acute respiratory syndrome coronavirus 2 synthetic construct
Macromolecule	3C-like proteinase (protein) N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE (protein)

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7BQY \| pdb_00007bqy	Download File View File

THE CRYSTAL STRUCTURE OF COVID-19 MAIN PROTEASE IN COMPLEX WITH AN INHIBITOR N3 at 1.7 angstrom

Liu, X., Zhang, B., Jin, Z., Yang, H., Rao, Z.

(2020) Nature 582: 289-293

Released	2020-04-22
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Severe acute respiratory syndrome coronavirus 2 synthetic construct
Macromolecule	3C-like proteinase (protein) N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE (protein)

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7D3C \| pdb_00007d3c	Download File View File

The newly emerged SARS-like coronavirus HCoV-EMC also has an "Achilles' heel": current effective inhibitor targeting a 3C-like protease

Yan, L., Ren, Z.

(2013) Protein Cell 4: 248-250

Released	2021-11-03
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Middle East respiratory syndrome-related coronavirus synthetic construct
Macromolecule	3C-like proteinase (protein) N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE (protein)

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7WKU \| pdb_00007wku	Download File View File

Structure of PDCoV Mpro in complex with an inhibitor

Wang, F.H., Yang, H.T.

(2022) Viruses 14:

Released	2022-05-25
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Porcine deltacoronavirus synthetic construct
Macromolecule	N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE (protein) Peptidase C30 (protein)

2AMQ | pdb_00002amq

Crystal Structure Of SARS_CoV Mpro in Complex with an Inhibitor N3

2HOB | pdb_00002hob

Crystal structure of SARS-CoV main protease with authentic N and C-termini in complex with a Michael acceptor N3

2Q6F | pdb_00002q6f

Crystal structure of infectious bronchitis virus (IBV) main protease in complex with a Michael acceptor inhibitor N3

3D23 | pdb_00003d23

Main protease of HCoV-HKU1

3IWM | pdb_00003iwm

The octameric SARS-CoV main protease

5EU8 | pdb_00005eu8

Structure of FIPV main protease in complex with dual inhibitors

5GWY | pdb_00005gwy

Structure of Main Protease from Human Coronavirus NL63: Insights for Wide Spectrum Anti-Coronavirus Drug Design

5GWZ | pdb_00005gwz

The structure of Porcine epidemic diarrhea virus main protease in complex with an inhibitor

6JIJ | pdb_00006jij

The Crystal Structure of Main Protease from Mouse Hepatitis Virus A59 in Complex with an inhibitor

6LU7 | pdb_00006lu7

The crystal structure of COVID-19 main protease in complex with an inhibitor N3

7BQY | pdb_00007bqy

THE CRYSTAL STRUCTURE OF COVID-19 MAIN PROTEASE IN COMPLEX WITH AN INHIBITOR N3 at 1.7 angstrom

7D3C | pdb_00007d3c

The newly emerged SARS-like coronavirus HCoV-EMC also has an "Achilles' heel": current effective inhibitor targeting a 3C-like protease

7WKU | pdb_00007wku

Structure of PDCoV Mpro in complex with an inhibitor

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2AMQ | pdb_00002amq

2HOB | pdb_00002hob

2Q6F | pdb_00002q6f

3D23 | pdb_00003d23

3IWM | pdb_00003iwm

5EU8 | pdb_00005eu8

5GWY | pdb_00005gwy

5GWZ | pdb_00005gwz

6JIJ | pdb_00006jij

6LU7 | pdb_00006lu7

7BQY | pdb_00007bqy

7D3C | pdb_00007d3c

7WKU | pdb_00007wku