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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Keywords HAS EXACT PHRASE "HYDROLASE (PHOSPHORIC DIESTER)"

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Search Summary

This query matches 50 Structures.

Refinements

Structure Determination Methodology

experimental (50)

Scientific Name of Source Organism

	Staphylococcus aureus (24)
	Bos taurus (23)
	Bacillus cereus (3)

Taxonomy

	Bacteria (27)
	Eukaryota (23)
	Eukaryota (eukaryotes) (1)

Experimental Method

	X-RAY DIFFRACTION (49)
	SOLUTION NMR (1)

Polymer Entity Type

Protein (50)

Refinement Resolution (Å)

	1.0 - 1.5 (2)
	1.5 - 2.0 (34)
	2.0 - 2.5 (11)
	2.5 - 3.0 (2)

Release Date

	1980 - 1984 (1)
	1985 - 1989 (1)
	1990 - 1994 (34)
	1995 - 1999 (14)

Enzyme Classification Name

	Hydrolases (49)
	Lyases (26)

Membrane Protein Annotation

OPM (1)

Symmetry Type

	Asymmetric (47)
	Cyclic (6)
	Dihedral (1)

SCOP Classification

	Alpha and beta proteins (a+b) (23)
	All beta proteins (24)
	Alpha and beta proteins (a/b) (3)

AllSelected

1 to 25 of 50 Structures

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1AQP \| pdb_00001aqp	Download File View File

RIBONUCLEASE A COPPER COMPLEX

Ramasubbu, N.

(1997) Proc Natl Acad Sci U S A 94: 9620-9625

Released	1998-05-27
Method	X-RAY DIFFRACTION 2 Å
Organisms	Bos taurus
Macromolecule	RIBONUCLEASE A (protein)
Unique Ligands	CU

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1ENA \| pdb_00001ena	Download File View File

CRYSTAL STRUCTURES OF THE BINARY CA2+ AND PDTP COMPLEXES AND THE TERNARY COMPLEX OF THE ASP 21->GLU MUTANT OF STAPHYLOCOCCAL NUCLEASE. IMPLICATIONS FOR CATALYSIS AND LIGAND BINDING

Libson, A., Gittis, A., Lattman, E.E.

(1994) Biochemistry 33: 8007-8016

Released	1994-05-31
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Staphylococcus aureus
Macromolecule	STAPHYLOCOCCAL NUCLEASE (protein)
Unique Ligands	CA

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1ENC \| pdb_00001enc	Download File View File

CRYSTAL STRUCTURES OF THE BINARY CA2+ AND PDTP COMPLEXES AND THE TERNARY COMPLEX OF THE ASP 21->GLU MUTANT OF STAPHYLOCOCCAL NUCLEASE. IMPLICATIONS FOR CATALYSIS AND LIGAND BINDING

Libson, A., Gittis, A., Lattman, E.E.

(1994) Biochemistry 33: 8007-8016

Released	1994-05-31
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Staphylococcus aureus
Macromolecule	STAPHYLOCOCCAL NUCLEASE (protein)
Unique Ligands	CA, THP

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1GYM \| pdb_00001gym	Download File View File

PHOSPHATIDYLINOSITOL-SPECIFIC PHOSPHOLIPASE C IN COMPLEX WITH GLUCOSAMINE-(ALPHA-1-6)-MYO-INOSITOL

Heinz, D.W., Ryan, M., Smith, M.P., Weaver, L.H., Keana, J.F.W., Griffith, O.H.

(1996) Biochemistry 35: 9496-9504

Released	1996-11-08
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Bacillus cereus
Macromolecule	PHOSPHATIDYLINOSITOL-SPECIFIC PHOSPHOLIPASE C (protein)
Unique Ligands	MYG

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1KAA \| pdb_00001kaa	Download File View File

STRESS AND STRAIN IN STAPHYLOCOCCAL NUCLEASE

Hodel, A., Fox, R.O.

(1993) Protein Sci 2: 838-850

Released	1994-01-31
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Staphylococcus aureus
Macromolecule	STAPHYLOCOCCAL NUCLEASE (protein)

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1KAB \| pdb_00001kab	Download File View File

STRESS AND STRAIN IN STAPHYLOCOCCAL NUCLEASE

Hodel, A., Fox, R.O.

(1993) Protein Sci 2: 838-850

Released	1994-01-31
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Staphylococcus aureus
Macromolecule	STAPHYLOCOCCAL NUCLEASE (protein)

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1KDA \| pdb_00001kda	Download File View File

STABILIZATION OF A STRAINED PROTEIN LOOP CONFORMATION THROUGH PROTEIN ENGINEERING

Hodel, A., Fox, R.O.

(1995) Protein Sci 4: 484-495

Released	1995-02-27
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Staphylococcus aureus
Macromolecule	STAPHYLOCOCCAL NUCLEASE (protein)

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1KDB \| pdb_00001kdb	Download File View File

STABILIZATION OF A STRAINED PROTEIN LOOP CONFORMATION THROUGH PROTEIN ENGINEERING

Hodel, A., Fox, R.O.

(1995) Protein Sci 4: 484-495

Released	1995-02-27
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Staphylococcus aureus
Macromolecule	STAPHYLOCOCCAL NUCLEASE (protein)

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1KDC \| pdb_00001kdc	Download File View File

STABILIZATION OF A STRAINED PROTEIN LOOP CONFORMATION THROUGH PROTEIN ENGINEERING

Hodel, A., Fox, R.O.

(1995) Protein Sci 4: 484-495

Released	1995-02-27
Method	X-RAY DIFFRACTION 2 Å
Organisms	Staphylococcus aureus
Macromolecule	STAPHYLOCOCCAL NUCLEASE (protein)

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1PTD \| pdb_00001ptd	Download File View File

PHOSPHATIDYLINOSITOL-SPECIFIC PHOSPHOLIPASE C

Heinz, D.W., Ryan, M., Bullock, T.L., Griffith, O.H.

(1995) EMBO J 14: 3855-3863

Released	1996-07-11
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Bacillus cereus
Macromolecule	PHOSPHATIDYLINOSITOL-SPECIFIC PHOSPHOLIPASE C (protein)

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1PTG \| pdb_00001ptg	Download File View File

PHOSPHATIDYLINOSITOL-SPECIFIC PHOSPHOLIPASE C IN COMPLEX WITH MYO-INOSITOL

Heinz, D.W., Ryan, M., Bullock, T.L., Griffith, O.H.

(1995) EMBO J 14: 3855-3863

Released	1996-07-11
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Bacillus cereus
Macromolecule	PHOSPHATIDYLINOSITOL-SPECIFIC PHOSPHOLIPASE C (protein)
Unique Ligands	INS

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1RNO \| pdb_00001rno	Download File View File

RIBONUCLEASE A CRYSTALLIZED FROM 80% AMMONIUM SULPHATE

Fedorov, A.A., Josef-Mccarthy, D., Graf, I., Anguelova, D., Fedorov, E.V., Almo, S.C.

(1996) Biochemistry 35: 15962-15979

Released	1996-04-03
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Bos taurus
Macromolecule	RIBONUCLEASE A (protein)
Unique Ligands	SO4

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1RNQ \| pdb_00001rnq	Download File View File

RIBONUCLEASE A CRYSTALLIZED FROM 8M SODIUM FORMATE

Fedorov, A.A., Josef-Mccarthy, D., Graf, I., Anguelova, D., Fedorov, E.V., Almo, S.C.

(1996) Biochemistry 35: 15962-15979

Released	1996-04-03
Method	X-RAY DIFFRACTION 2 Å
Organisms	Bos taurus
Macromolecule	RIBONUCLEASE A (protein)
Unique Ligands	FMT

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1RNX \| pdb_00001rnx	Download File View File

RIBONUCLEASE A CRYSTALLIZED FROM 3M SODIUM CHLORIDE, 30% AMMONIUM SULFATE

Fedorov, A.A., Joseph-Mccarthy, D., Fedorov, L., Sirakova, D., Graf, I., Almo, S.C.

(1996) Biochemistry 35: 15962-15979

Released	1996-11-08
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Bos taurus
Macromolecule	RIBONUCLEASE A (protein)
Unique Ligands	CL

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1RNY \| pdb_00001rny	Download File View File

RIBONUCLEASE A CRYSTALLIZED FROM 3M CESIUM CHLORIDE, 30% AMMONIUM SULFATE

Fedorov, A.A., Joseph-Mccarthy, D., Fedorov, L., Sirakova, D., Graf, I., Almo, S.C.

(1996) Biochemistry 35: 15962-15979

Released	1996-11-08
Method	X-RAY DIFFRACTION 2 Å
Organisms	Bos taurus
Macromolecule	RIBONUCLEASE A (protein)
Unique Ligands	CL, CS

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1RPF \| pdb_00001rpf	Download File View File

THE STRUCTURES OF RNASE COMPLEXED WITH 3'-CMP AND D(CPA): ACTIVE SITE CONFORMATION AND CONSERVED WATER MOLECULES

Zegers, I., Wyns, L., Palmer, R.

(1994) Protein Sci 3: 2322-2339

Released	1994-12-20
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Bos taurus
Macromolecule	RIBONUCLEASE A (protein)
Unique Ligands	C3P

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1RPG \| pdb_00001rpg	Download File View File

STRUCTURES OF RNASE A COMPLEXED WITH 3'-CMP AND D(CPA): ACTIVE SITE CONFORMATION AND CONSERVED WATER MOLECULES

Zegers, I., Wyns, L., Palmer, R.

(1994) Protein Sci 3: 2322-2339

Released	1994-12-20
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Bos taurus
Macromolecule	RIBONUCLEASE A (protein)
Unique Ligands	CPA, MPD

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1RPH \| pdb_00001rph	Download File View File

STRUCTURES OF RNASE A COMPLEXED WITH 3'-CMP AND D(CPA): ACTIVE SITE CONFORMATION AND CONSERVED WATER MOLECULES

Zegers, I., Wyns, L., Palmer, R.

(1994) Protein Sci 3: 2322-2339

Released	1994-12-20
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Bos taurus
Macromolecule	RIBONUCLEASE A (protein)
Unique Ligands	SO4

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1SNC \| pdb_00001snc	Download File View File

THE CRYSTAL STRUCTURE OF THE TERNARY COMPLEX OF STAPHYLOCOCCAL NUCLEASE, CA2+, AND THE INHIBITOR PD*TP, REFINED AT 1.65 ANGSTROMS

Loll, P.J., Lattman, E.E.

(1989) Proteins 5: 183-201

Released	1990-10-15
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Staphylococcus aureus
Macromolecule	THERMONUCLEASE PRECURSOR (protein)
Unique Ligands	CA, THP

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1SNM \| pdb_00001snm	Download File View File

ACTIVE SITE MUTANT GLU-43 (RIGHT ARROW) ASP IN STAPHYLOCOCCAL NUCLEASE DISPLAYS NONLOCAL STRUCTURAL CHANGES

Loll, P.J., Lattman, E.E.

(1990) Biochemistry 29: 6866-6873

Released	1991-07-15
Method	X-RAY DIFFRACTION 1.74 Å
Organisms	Staphylococcus aureus
Macromolecule	THERMONUCLEASE PRECURSOR (protein)
Unique Ligands	CA, THP

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1STA \| pdb_00001sta	Download File View File

ACCOMMODATION OF INSERTION MUTATIONS ON THE SURFACE AND IN THE INTERIOR OF STAPHYLOCOCCAL NUCLEASE

Keefe, L.J., Quirk, S., Gittis, A., Lattman, E.E.

(1994) Protein Sci 3: 391-401

Released	1994-06-22
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Staphylococcus aureus
Macromolecule	STAPHYLOCOCCAL NUCLEASE (protein)
Unique Ligands	CA, THP

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1STB \| pdb_00001stb	Download File View File

ACCOMMODATION OF INSERTION MUTATIONS ON THE SURFACE AND IN THE INTERIOR OF STAPHYLOCOCCAL NUCLEASE

Quirk, S., Gittis, A., Keefe, L.J., Lattman, E.E.

(1994) Protein Sci 3: 391-401

Released	1994-07-31
Method	X-RAY DIFFRACTION 2 Å
Organisms	Staphylococcus aureus
Macromolecule	STAPHYLOCOCCAL NUCLEASE (protein)
Unique Ligands	CA, THP

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1STG \| pdb_00001stg	Download File View File

TWO DISTINCTLY DIFFERENT METAL BINDING MODES ARE SEEN IN X-RAY CRYSTAL STRUCTURES OF STAPHYLOCOCCAL NUCLEASE-COBALT(II)-NUCLEOTIDE COMPLEXES

Loll, P.J., Quirk, S., Lattman, E.E.

(1995) Biochemistry 34: 4316-4324

Released	1995-01-26
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Staphylococcus aureus
Macromolecule	STAPHYLOCOCCAL NUCLEASE (protein)
Unique Ligands	CO, THP

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1STH \| pdb_00001sth	Download File View File

TWO DISTINCTLY DIFFERENT METAL BINDING MODES ARE SEEN IN X-RAY CRYSTAL STRUCTURES OF STAPHYLOCOCCAL NUCLEASE-COBALT(II)-NUCLEOTIDE COMPLEXES

Loll, P.J., Quirk, S., Lattman, E.E.

(1995) Biochemistry 34: 4316-4324

Released	1995-02-27
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Staphylococcus aureus
Macromolecule	STAPHYLOCOCCAL NUCLEASE (protein)
Unique Ligands	CO, THP

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1STN \| pdb_00001stn	Download File View File

THE CRYSTAL STRUCTURE OF STAPHYLOCOCCAL NUCLEASE REFINED AT 1.7 ANGSTROMS RESOLUTION

Hynes, T.R., Fox, R.O.

(1991) Proteins 10: 92-105

Released	1994-07-31
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Staphylococcus aureus
Macromolecule	STAPHYLOCOCCAL NUCLEASE (protein)

1 to 25 of 50 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1AQP | pdb_00001aqp

1ENA | pdb_00001ena

1ENC | pdb_00001enc

1GYM | pdb_00001gym

1KAA | pdb_00001kaa

1KAB | pdb_00001kab

1KDA | pdb_00001kda

1KDB | pdb_00001kdb

1KDC | pdb_00001kdc

1PTD | pdb_00001ptd

1PTG | pdb_00001ptg

1RNO | pdb_00001rno

1RNQ | pdb_00001rnq

1RNX | pdb_00001rnx

1RNY | pdb_00001rny

1RPF | pdb_00001rpf

1RPG | pdb_00001rpg

1RPH | pdb_00001rph

1SNC | pdb_00001snc

1SNM | pdb_00001snm

1STA | pdb_00001sta

1STB | pdb_00001stb

1STG | pdb_00001stg

1STH | pdb_00001sth

1STN | pdb_00001stn