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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Keywords HAS EXACT PHRASE "TRANSFERASE/SUBSTRATE"

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Search Summary

This query matches 33 Structures.

Refinements

Structure Determination Methodology

experimental (33)

Scientific Name of Source Organism

	Homo sapiens (17)
	Tetranychus urticae (4)
	Rattus norvegicus (3)
	Staphylococcus aureus (3)
	Escherichia coli K-12 (2)
	Sporomusa ovata (2)
	synthetic construct (2)
	Bos taurus (1)
	Fasciola hepatica (1)
	Mus musculus (1)

More...

Taxonomy

	Eukaryota (25)
	Bacteria (9)
	Eukaryota (eukaryotes) (2)
	other sequences (2)
	Archaea (1)

Experimental Method

	X-RAY DIFFRACTION (32)
	ELECTRON MICROSCOPY (1)

Polymer Entity Type

Protein (33)

Refinement Resolution (Å)

	1.5 - 2.0 (9)
	2.0 - 2.5 (13)
	2.5 - 3.0 (10)
	3.0 - 3.5 (1)

Release Date

	1995 - 1999 (4)
	2000 - 2004 (6)
	2010 - 2014 (10)
	2015 - 2019 (3)
	2020 - 2024 (6)
	2025 - 2029 (4)

Enzyme Classification Name

	Transferases (31)
	Hydrolases (3)

Symmetry Type

	Asymmetric (20)
	Cyclic (14)

SCOP Classification

	All alpha proteins (7)
	Alpha and beta proteins (a/b) (7)
	Alpha and beta proteins (a+b) (5)
	Artifacts (1)

AllSelected

1 to 25 of 33 Structures

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1AQW \| pdb_00001aqw	Download File View File

GLUTATHIONE S-TRANSFERASE IN COMPLEX WITH GLUTATHIONE

Prade, L., Huber, R., Manoharan, T.H., Fahl, W.E., Reuter, W.

(1997) Structure 5: 1287-1295

Released	1998-03-18
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	GLUTATHIONE S-TRANSFERASE (protein)
Unique Ligands	GSH, MES

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1AQX \| pdb_00001aqx	Download File View File

GLUTATHIONE S-TRANSFERASE IN COMPLEX WITH MEISENHEIMER COMPLEX

Prade, L., Huber, R., Manoharan, T.H., Fahl, W.E., Reuter, W.

(1997) Structure 5: 1287-1295

Released	1998-03-18
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	GLUTATHIONE S-TRANSFERASE (protein)
Unique Ligands	GTD, MES

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2FHE \| pdb_00002fhe	Download File View File

FASCIOLA HEPATICA GLUTATHIONE S-TRANSFERASE ISOFORM 1 IN COMPLEX WITH GLUTATHIONE

Polekhina, G., Rossjohn, J., Feil, S.C., Parker, M.W.

(1997) J Mol Biology 273: 857-872

Released	1998-10-28
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Fasciola hepatica
Macromolecule	GLUTATHIONE S-TRANSFERASE (protein)
Unique Ligands	GSH

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4HDM \| pdb_00004hdm	Download File View File

Crystal Structure of ArsAB in Complex with p-cresol

Newmister, S.A., Chan, C.H., Escalante-Semerena, J.C., Rayment, I.

(2012) Biochemistry 51: 8571-8582

Released	2012-10-24
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Sporomusa ovata
Macromolecule	ArsA (protein) ArsB (protein)
Unique Ligands	EDO, PCR

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4HDS \| pdb_00004hds	Download File View File

Crystal Structure of ArsAB in Complex with Phenol.

Newmister, S.A., Chan, C.H., Escalante-Semerena, J.C., Rayment, I.

(2012) Biochemistry 51: 8571-8582

Released	2012-10-24
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Sporomusa ovata
Macromolecule	ArsA (protein) ArsB (protein)
Unique Ligands	EDO, IPH

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4N39 \| pdb_00004n39	Download File View File

Crystal structure of human O-GlcNAc transferase bound to a peptide from HCF-1 pro-repeat 2 (11-26)

Lazarus, M.B., Herr, W., Walker, S.

(2013) Science 342: 1235-1239

Released	2014-01-01
Method	X-RAY DIFFRACTION 1.76 Å
Organisms	Homo sapiens
Macromolecule	Host cell factor 1 (protein) UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit (protein)
Unique Ligands	UDP

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4N3A \| pdb_00004n3a	Download File View File

Crystal Structure of human O-GlcNAc transferase bound to a peptide from HCF-1 pro-repeat 2 (1-26)E10A

Lazarus, M.B., Herr, W., Walker, S.

(2013) Science 342: 1235-1239

Released	2014-01-01
Method	X-RAY DIFFRACTION 1.88 Å
Organisms	Homo sapiens
Macromolecule	Host cell factor 1 (protein) UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit (protein)
Unique Ligands	UDP

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4N3B \| pdb_00004n3b	Download File View File

Crystal Structure of human O-GlcNAc Transferase bound to a peptide from HCF-1 pro-repeat2(1-26)E10Q and UDP-5SGlcNAc

Lazarus, M.B., Herr, W., Walker, S.

(2013) Science 342: 1235-1239

Released	2014-01-01
Method	X-RAY DIFFRACTION 2.17 Å
Organisms	Homo sapiens
Macromolecule	Host cell factor 1 (protein) UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit (protein)
Unique Ligands	12V

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4N3C \| pdb_00004n3c	Download File View File

Crystal Structure of human O-GlcNAc Transferase bound to a peptide from HCF-1 pro-repeat2(1-26) and UDP-GlcNAc

Lazarus, M.B., Herr, W., Walker, S.

(2013) Science 342: 1235-1239

Released	2014-01-01
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Homo sapiens
Macromolecule	Host cell factor 1 (protein) UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit (protein)
Unique Ligands	UD1

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5V1D \| pdb_00005v1d	Download File View File

Complex structure of the bovine PERK luminal domain and its substrate peptide

Wang, P., Li, J., Sha, B.

(2018) J Biological Chem 293: 4110-4121

Released	2018-02-14
Method	X-RAY DIFFRACTION 2.799 Å
Organisms	Bos taurus synthetic construct
Macromolecule	12-mer peptide (protein) eIF2AK3 protein (protein)

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7ML5 \| pdb_00007ml5	Download File View File

Structure of the Starch Branching Enzyme I (BEI) complexed with maltododecaose from Oryza sativa L

Nayebi Gavgani, H., Fawaz, R., Geiger, J.H.

(2021) J Biological Chem 298: 101395-101395

Released	2021-11-17
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Oryza sativa Japonica Group
Macromolecule	Isoform 2 of 1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic (protein)
Unique branched monosaccharides	GLC

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7SCD \| pdb_00007scd	Download File View File

Ternary complex of fixed-arm Trx-3ost5 (I299E) with 8mer-1 octasaccharide substrate and co-factor product PAP

Wander, R., Kaminski, A.M., Krahn, J.M., Liu, J., Pedersen, L.C.

(2021) ACS Catal 11: 14956-14966

Released	2022-01-19
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Escherichia coli K-12 Homo sapiens
Macromolecule	Thioredoxin 1,Heparan sulfate glucosamine 3-O-sulfotransferase 5 (protein)
Unique Ligands	A3P
Unique branched monosaccharides	BDP, SGN

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7SCE \| pdb_00007sce	Download File View File

Ternary complex of fixed-arm Trx-3ost5 (I299E) with 8mer-2 octasaccharide substrate and co-factor product PAP

Wander, R., Kaminski, A.M., Krahn, J.M., Liu, J., Pedersen, L.C.

(2021) ACS Catal 11: 14956-14966

Released	2022-01-19
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Escherichia coli K-12 Homo sapiens
Macromolecule	Thioredoxin 1,Heparan sulfate glucosamine 3-O-sulfotransferase 5 (protein)
Unique Ligands	A3P
Unique branched monosaccharides	BDP, IDS, SGN

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7SCL \| pdb_00007scl	Download File View File

The X-ray crystal structure of Staphylococcus aureus Fatty Acid Kinase B1 (FakB1) mutant R173A in complex with Palmitate to 1.60 Angstrom resolution

Cuypers, M.G., Gullett, J.M., Subramanian, C., Rock, C.O., White, S.W.

(2022) J Biological Chem 298: 101676-101676

Released	2021-10-27
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Staphylococcus aureus
Macromolecule	Fatty Acid Kinase B1 (protein)
Unique Ligands	GOL, PLM

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7SG3 \| pdb_00007sg3	Download File View File

The X-ray crystal structure of the Staphylococcus aureus Fatty Acid Kinase B1 mutant A121I-A158L to 2.35 Angstrom resolution (Open form chain A, Palmitate bound)

Cuypers, M.G., Gullett, J.M., Rock, C.O., White, S.W.

(2022) J Biological Chem 298: 101676-101676

Released	2021-10-27
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Staphylococcus aureus
Macromolecule	Fatty Acid Kinase B1 (protein)
Unique Ligands	PLM

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8UDA \| pdb_00008uda	Download File View File

Crystal Structure of Mu class Glutathione-S-Transferase, TuGSTm12(Tetur05g05300) from Tetranychus urticae

Khatri, K., Arriaza, R.H., Chruszcz, M.

To be published

Released	2025-03-19
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Tetranychus urticae
Macromolecule	Glutathione-S-Transferase (protein)
Unique Ligands	ACT, GSH

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8UDB \| pdb_00008udb	Download File View File

Crystal Structure of Mu class GST from TuGSTm12 (Tetur05g05300) from Tetranychus urticae

Khatri, K., Arriaza, R., Chruszcz, M.

To be published

Released	2025-03-19
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Tetranychus urticae
Macromolecule	Glutathione-S-Transferase (protein)
Unique Ligands	GSH

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8UDD \| pdb_00008udd	Download File View File

Crystal Structure of Mu class Glutathione-S-Transferase, TuGSTm12(Tetur05g05300) from Tetranychus urticae

Khatri, K., Arriaza, R.H., Chruszcz, M.

To be published

Released	2025-03-19
Method	X-RAY DIFFRACTION 2.65 Å
Organisms	Tetranychus urticae
Macromolecule	Glutathione-S-Transferase (protein)
Unique Ligands	GSH

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8UDE \| pdb_00008ude	Download File View File

Crystal Structure of Mu class Glutathione-S-Transferase, TuGSTm06(Tetur05g05220) from Tetranychus urticae

Khatri, K., Arriaza, R.H., Chruszcz, M.

To be published

Released	2025-03-19
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Tetranychus urticae
Macromolecule	Glutathione-S-Transferase (protein)
Unique Ligands	GSH, SO4

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1GY3 \| pdb_00001gy3	Download File View File

pCDK2/cyclin A in complex with MgADP, nitrate and peptide substrate

Cook, A., Lowe, E.D., Chrysina, E.D., Skamnaki, V.T., Oikonomakos, N.G., Johnson, L.N.

(2002) Biochemistry 41: 7301

Released	2002-04-29
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	CELL DIVISION PROTEIN KINASE 2 (protein) CYCLIN A2 (protein) SUBSTRATE PEPTIDE (protein)
Unique Ligands	ATP, GOL, MG, NO3

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1IR3 \| pdb_00001ir3	Download File View File

PHOSPHORYLATED INSULIN RECEPTOR TYROSINE KINASE IN COMPLEX WITH PEPTIDE SUBSTRATE AND ATP ANALOG

Hubbard, S.R.

(1997) EMBO J 16: 5572-5581

Released	1998-01-07
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	INSULIN RECEPTOR (protein) PEPTIDE SUBSTRATE (protein)
Unique Ligands	ANP, MG

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1KZO \| pdb_00001kzo	Download File View File

PROTEIN FARNESYLTRANSFERASE COMPLEXED WITH FARNESYLATED K-RAS4B PEPTIDE PRODUCT AND FARNESYL DIPHOSPHATE SUBSTRATE BOUND SIMULTANEOUSLY

Long, S.B., Casey, P.J., Beese, L.S.

(2002) Nature 419: 645-650

Released	2002-10-16
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens Rattus norvegicus
Macromolecule	Farnesylated K-Ras4B peptide product (protein) Protein Farnesyltransferase alpha subunit (protein) Protein Farnesyltransferase beta subunit (protein)
Unique Ligands	ACY, FAR, FPP, ZN

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1KZP \| pdb_00001kzp	Download File View File

PROTEIN FARNESYLTRANSFERASE COMPLEXED WITH A FARNESYLATED K-RAS4B PEPTIDE PRODUCT

Long, S.B., Casey, P.J., Beese, L.S.

(2002) Nature 419: 645-650

Released	2002-10-16
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens Rattus norvegicus
Macromolecule	Farnesylated K-Ras4B peptide product (protein) Protein Farnesyltransferase alpha subunit (protein) Protein Farnesyltransferase beta subunit (protein)
Unique Ligands	ACY, FAR, ZN

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1O9U \| pdb_00001o9u	Download File View File

GLYCOGEN SYNTHASE KINASE 3 BETA COMPLEXED WITH AXIN PEPTIDE

Dajani, R., Pearl, L.H., Roe, S.M.

(2003) EMBO J 22: 494

Released	2003-08-15
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	AXIN PEPTIDE (protein) GLYCOGEN SYNTHASE KINASE-3 BETA (protein)
Unique Ligands	ADZ

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1P4N \| pdb_00001p4n	Download File View File

Crystal Structure of Weissella viridescens FemX:UDP-MurNAc-pentapeptide complex

Biarrotte-Sorin, S., Maillard, A., Delettre, J., Sougakoff, W., Arthur, M., Mayer, C.

(2004) Structure 12: 257-267

Released	2004-02-10
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Staphylococcus aureus Weissella viridescens
Macromolecule	FemX (protein) UDP-MurNAc-pentapeptide (protein)
Unique Ligands	GOL, MG

1 to 25 of 33 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1AQW | pdb_00001aqw

1AQX | pdb_00001aqx

2FHE | pdb_00002fhe

4HDM | pdb_00004hdm

4HDS | pdb_00004hds

4N39 | pdb_00004n39

4N3A | pdb_00004n3a

4N3B | pdb_00004n3b

4N3C | pdb_00004n3c

5V1D | pdb_00005v1d

7ML5 | pdb_00007ml5

7SCD | pdb_00007scd

7SCE | pdb_00007sce

7SCL | pdb_00007scl

7SG3 | pdb_00007sg3

8UDA | pdb_00008uda

8UDB | pdb_00008udb

8UDD | pdb_00008udd

8UDE | pdb_00008ude

1GY3 | pdb_00001gy3

1IR3 | pdb_00001ir3

1KZO | pdb_00001kzo

1KZP | pdb_00001kzp

1O9U | pdb_00001o9u

1P4N | pdb_00001p4n