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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Space Group = "I 21 3"

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Search Summary

This query matches 456 Structures.

Refinements

Structure Determination Methodology

experimental (456)

Scientific Name of Source Organism

	Homo sapiens (101)
	Escherichia coli (32)
	Klebsiella aerogenes (31)
	Sus scrofa (23)
	Bos taurus (18)
	Influenza A virus (A/Puerto Rico/8/1934(H1N1)) (12)
	synthetic construct (10)
	Saccharomyces cerevisiae (9)
	Xanthomonas campestris pv. campestris str. ATCC 33913 (9)
	Lactobacillus leichmannii (8)

More...

Taxonomy

	Eukaryota (209)
	Bacteria (177)
	Riboviria (50)
	Archaea (14)
	other sequences (10)
	Varidnaviria (8)
	Duplodnaviria (6)
	Monodnaviria (2)
	Eukaryota (eukaryotes) (1)
	Viruses incertae sedis (1)

Experimental Method

	X-RAY DIFFRACTION (453)
	NEUTRON DIFFRACTION (2)
	POWDER DIFFRACTION (1)

Polymer Entity Type

	Protein (454)
	DNA (4)
	RNA (2)

Refinement Resolution (Å)

	0.5 - 1.0 (2)
	1.0 - 1.5 (44)
	1.5 - 2.0 (113)
	2.0 - 2.5 (134)
	2.5 - 3.0 (98)
	3.0 - 3.5 (42)
	3.5 - 4.0 (11)
	4.0 - 4.5 (5)
	> 4.5 (7)

Release Date

	1990 - 1994 (6)
	1995 - 1999 (38)
	2000 - 2004 (52)
	2005 - 2009 (59)
	2010 - 2014 (97)
	2015 - 2019 (105)
	2020 - 2024 (90)
	2025 - 2029 (9)

Enzyme Classification Name

	Hydrolases (61)
	Transferases (64)
	Oxidoreductases (31)
	Lyases (22)
	Isomerases (7)
	Ligases (4)

Membrane Protein Annotation

	PDBTM (8)
	MemProtMD (7)
	OPM (4)
	mpstruc (1)

Symmetry Type

	Cyclic (308)
	Asymmetric (165)
	Dihedral (25)
	Tetrahedral (2)
	Icosahedral (2)

SCOP Classification

	All beta proteins (72)
	Alpha and beta proteins (a+b) (92)
	Alpha and beta proteins (a/b) (63)
	Small proteins (23)
	Artifacts (24)
	All alpha proteins (12)
	Coiled coil proteins (10)
	Membrane and cell surface proteins and peptides (2)
	Multi-domain proteins (alpha and beta) (2)
	Peptides (1)

AllSelected

1 to 25 of 456 Structures

Page 1 of 19

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1A5K \| pdb_00001a5k	Download File View File

K217E VARIANT OF KLEBSIELLA AEROGENES UREASE

Pearson, M.A., Schaller, R.A., Michel, L.O., Karplus, P.A., Hausinger, R.P.

(1998) Biochemistry 37: 6214-6220

Released	1998-05-27
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Klebsiella aerogenes
Macromolecule	UREASE (ALPHA SUBUNIT) (protein) UREASE (BETA SUBUNIT) (protein) UREASE (GAMMA SUBUNIT) (protein)

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1A5L \| pdb_00001a5l	Download File View File

K217C VARIANT OF KLEBSIELLA AEROGENES UREASE

Pearson, M.A., Schaller, R.A., Michel, L.O., Karplus, P.A., Hausinger, R.P.

(1998) Biochemistry 37: 6214-6220

Released	1998-05-27
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Klebsiella aerogenes
Macromolecule	UREASE (ALPHA SUBUNIT) (protein) UREASE (BETA SUBUNIT) (protein) UREASE (GAMMA SUBUNIT) (protein)

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1A5M \| pdb_00001a5m	Download File View File

K217A VARIANT OF KLEBSIELLA AEROGENES UREASE

Pearson, M.A., Schaller, R.A., Michel, L.O., Karplus, P.A., Hausinger, R.P.

(1998) Biochemistry 37: 6214-6220

Released	1998-05-27
Method	X-RAY DIFFRACTION 2 Å
Organisms	Klebsiella aerogenes
Macromolecule	UREASE (ALPHA SUBUNIT) (protein) UREASE (BETA SUBUNIT) (protein) UREASE (GAMMA SUBUNIT) (protein)

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1A5N \| pdb_00001a5n	Download File View File

K217A VARIANT OF KLEBSIELLA AEROGENES UREASE, CHEMICALLY RESCUED BY FORMATE AND NICKEL

Pearson, M.A., Schaller, R.A., Michel, L.O., Karplus, P.A., Hausinger, R.P.

(1998) Biochemistry 37: 6214-6220

Released	1998-05-27
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Klebsiella aerogenes
Macromolecule	UREASE (ALPHA SUBUNIT) (protein) UREASE (BETA SUBUNIT) (protein) UREASE (GAMMA SUBUNIT) (protein)
Unique Ligands	FMT, NI

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1A5O \| pdb_00001a5o	Download File View File

K217C VARIANT OF KLEBSIELLA AEROGENES UREASE, CHEMICALLY RESCUED BY FORMATE AND NICKEL

Pearson, M.A., Schaller, R.A., Michel, L.O., Karplus, P.A., Hausinger, R.P.

(1998) Biochemistry 37: 6214-6220

Released	1998-05-27
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Klebsiella aerogenes
Macromolecule	UREASE (ALPHA SUBUNIT) (protein) UREASE (BETA SUBUNIT) (protein) UREASE (GAMMA SUBUNIT) (protein)
Unique Ligands	FMT, NI

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1AJM \| pdb_00001ajm	Download File View File

CRYSTAL STRUCTURE OF THYMIDYLATE SYNTHASE R126E MUTANT

Strop, P., Montfort, W.R.

(1997) Protein Sci 6: 2504-2511

Released	1997-11-12
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Escherichia coli
Macromolecule	THYMIDYLATE SYNTHASE (protein)

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1AL0 \| pdb_00001al0	Download File View File

PROCAPSID OF BACTERIOPHAGE PHIX174

Rossmann, M.G., Dokland, T.

(1997) Nature 389: 308-313

Released	1998-01-28
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Sinsheimervirus phiX174
Macromolecule	CAPSID PROTEIN GPF (protein) SCAFFOLDING PROTEIN GPB (protein) SCAFFOLDING PROTEIN GPD (protein) SPIKE PROTEIN GPG (protein)

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1AOB \| pdb_00001aob	Download File View File

E. COLI THYMIDYLATE SYNTHASE COMPLEXED WITH DDURD

Stout, T.J., Sage, C.R., Stroud, R.M.

(1998) Structure 6: 839-848

Released	1998-07-01
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Escherichia coli
Macromolecule	THYMIDYLATE SYNTHASE (protein)
Unique Ligands	DDU, FMT, PO4

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1APH \| pdb_00001aph	Download File View File

CONFORMATIONAL CHANGES IN CUBIC INSULIN CRYSTALS IN THE PH RANGE 7-11

Gursky, O., Badger, J., Li, Y., Caspar, D.L.D.

(1992) Biophys J 63: 1210-1220

Released	1993-01-15
Method	X-RAY DIFFRACTION 2 Å
Organisms	Bos taurus
Macromolecule	INSULIN A CHAIN (PH 7) (protein) INSULIN B CHAIN (PH 7) (protein)
Unique Ligands	DCE

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1AT0 \| pdb_00001at0	Download File View File

17-kDA fragment of hedgehog C-terminal autoprocessing domain

Hall, T.M.T., Porter, J.A., Young, K.E., Koonin, E.V., Beachy, P.A., Leahy, D.J.

(1997) Cell 91: 85-97

Released	1997-11-12
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Drosophila melanogaster
Macromolecule	17-HEDGEHOG (protein)

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1B17 \| pdb_00001b17	Download File View File

PH AFFECTS GLU B13 SWITCHING AND SULFATE BINDING IN CUBIC INSULIN CRYSTALS (PH 5.00 COORDINATES)

Diao, J.S., Caspar, D.L.D.

(2003) Acta Crystallogr D Biol Crystallogr 59: 670-676

Released	2003-04-08
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Sus scrofa
Macromolecule	PROTEIN (INSULIN A chain) (protein) PROTEIN (INSULIN b chain) (protein)
Unique Ligands	SO4

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1B18 \| pdb_00001b18	Download File View File

PH AFFECTS GLU B13 SWITCHING AND SULFATE BINDING IN CUBIC INSULIN CRYSTALS (PH 5.53 COORDINATES)

Diao, J.S., Caspar, D.L.D.

(2003) Acta Crystallogr D Biol Crystallogr 59: 670-676

Released	2003-04-08
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Sus scrofa
Macromolecule	PROTEIN (INSULIN a chain) (protein) PROTEIN (INSULIN b chain) (protein)
Unique Ligands	SO4

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1B19 \| pdb_00001b19	Download File View File

PH AFFECTS GLU B13 SWITCHING AND SULFATE BINDING IN CUBIC INSULIN CRYSTALS (PH 5.80 COORDINATES)

Diao, J.S., Caspar, D.L.D.

(2003) Acta Crystallogr D Biol Crystallogr 59: 670-676

Released	2003-04-08
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Sus scrofa
Macromolecule	PROTEIN (INSULIN A CHAIN) (protein) PROTEIN (INSULIN B CHAIN) (protein)
Unique Ligands	SO4

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1B2A \| pdb_00001b2a	Download File View File

PH AFFECTS GLU B13 SWITCHING AND SULFATE BINDING IN CUBIC INSULIN CRYSTALS (PH 6.00 COORDINATES)

Diao, J.S., Caspar, D.L.D.

(2003) Acta Crystallogr D Biol Crystallogr 59: 670-676

Released	2003-04-08
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Sus scrofa
Macromolecule	PROTEIN (INSULIN A CHAIN) (protein) PROTEIN (INSULIN B CHAIN) (protein)
Unique Ligands	SO4

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1B2B \| pdb_00001b2b	Download File View File

PH AFFECTS GLU B13 SWITCHING AND SULFATE BINDING IN CUBIC INSULIN CRYSTALS (PH 6.16 COORDINATES)

Diao, J.S., Caspar, D.L.D.

(2003) Acta Crystallogr D Biol Crystallogr 59: 670-676

Released	2003-04-08
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Sus scrofa
Macromolecule	PROTEIN (INSULIN A CHAIN) (protein) PROTEIN (INSULIN B CHAIN) (protein)
Unique Ligands	SO4

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1B2C \| pdb_00001b2c	Download File View File

PH AFFECTS GLU B13 SWITCHING AND SULFATE BINDING IN CUBIC INSULIN CRYSTALS (PH 6.26 COORDINATES)

Diao, J.S., Caspar, D.L.D.

(2003) Acta Crystallogr D Biol Crystallogr 59: 670-676

Released	2003-04-08
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Sus scrofa
Macromolecule	PROTEIN (INSULIN A CHAIN) (protein) PROTEIN (INSULIN B CHAIN) (protein)
Unique Ligands	SO4

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1B2D \| pdb_00001b2d	Download File View File

PH AFFECTS GLU B13 SWITCHING AND SULFATE BINDING IN CUBIC INSULIN CRYSTALS (PH 6.35 COORDINATES)

Diao, J.S., Caspar, D.L.D.

(2003) Acta Crystallogr D Biol Crystallogr 59: 670-676

Released	2003-04-08
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Sus scrofa
Macromolecule	PROTEIN (INSULIN A CHAIN) (protein) PROTEIN (INSULIN B CHAIN) (protein)
Unique Ligands	SO4

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1B2E \| pdb_00001b2e	Download File View File

PH AFFECTS GLU B13 SWITCHING AND SULFATE BINDING IN CUBIC INSULIN CRYSTALS (PH 6.50 COORDINATES)

Diao, J.S., Caspar, D.L.D.

(2003) Acta Crystallogr D Biol Crystallogr 59: 670-676

Released	2003-04-08
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Sus scrofa
Macromolecule	PROTEIN (INSULIN a chain) (protein) PROTEIN (INSULIN b chain) (protein)
Unique Ligands	SO4

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1B2F \| pdb_00001b2f	Download File View File

PH AFFECTS GLU B13 SWITCHING AND SULFATE BINDING IN CUBIC INSULIN CRYSTALS (PH 6.98 COORDINATES)

Diao, J.S., Caspar, D.L.D.

(2003) Acta Crystallogr D Biol Crystallogr 59: 670-676

Released	2003-04-08
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Sus scrofa
Macromolecule	PROTEIN (INSULIN A CHAIN) (protein) PROTEIN (INSULIN B CHAIN) (protein)

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1B2G \| pdb_00001b2g	Download File View File

PH AFFECTS GLU B13 SWITCHING AND SULFATE BINDING IN CUBIC INSULIN CRYSTALS (PH 9.00 COORDINATES)

Diao, J.S., Caspar, D.L.D.

(2003) Acta Crystallogr D Biol Crystallogr 59: 670-676

Released	2003-04-08
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Sus scrofa
Macromolecule	PROTEIN (INSULIN a chain) (protein) PROTEIN (INSULIN b chain) (protein)

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1BDU \| pdb_00001bdu	Download File View File

E. COLI THYMIDYLATE SYNTHASE COMPLEXED WITH DURD

Stout, T.J., Sage, C.R., Stroud, R.M.

(1998) Structure 6: 839-848

Released	1998-07-01
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Escherichia coli
Macromolecule	THYMIDYLATE SYNTHASE (protein)
Unique Ligands	DUR, PO4

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1BID \| pdb_00001bid	Download File View File

E. COLI THYMIDYLATE SYNTHASE COMPLEXED WITH DUMP

Stout, T.J., Sage, C.R., Stroud, R.M.

(1998) Structure 6: 839-848

Released	1998-07-01
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Escherichia coli
Macromolecule	THYMIDYLATE SYNTHASE (protein)
Unique Ligands	UMP

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1BJG \| pdb_00001bjg	Download File View File

D221(169)N MUTANT DOES NOT PROMOTE OPENING OF THE COFACTOR IMIDAZOLIDINE RING

Sage, C.R., Michelitsch, M.D., Finer-Moore, J., Stroud, R.M.

(1998) Biochemistry 37: 13893-13901

Released	1998-11-04
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Escherichia coli
Macromolecule	THYMIDYLATE SYNTHASE (protein)
Unique Ligands	TMF, UFP

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1BPH \| pdb_00001bph	Download File View File

CONFORMATIONAL CHANGES IN CUBIC INSULIN CRYSTALS IN THE PH RANGE 7-11

Gursky, O., Badger, J., Li, Y., Caspar, D.L.D.

(1992) Biophys J 63: 1210-1220

Released	1993-01-15
Method	X-RAY DIFFRACTION 2 Å
Organisms	Bos taurus
Macromolecule	INSULIN A CHAIN (PH 9) (protein) INSULIN B CHAIN (PH 9) (protein)
Unique Ligands	DCE, NA