5JK8

Phenylalanine hydroxylase from dictyostelium - BH2, norleucine complex


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.39 Å
  • R-Value Free: 0.242 
  • R-Value Work: 0.165 
  • R-Value Observed: 0.169 

wwPDB Validation   3D Report Full Report


Ligand Structure Quality Assessment 


This is version 1.0 of the entry. See complete history


Literature

Phenylalanine hydroxylase from dictyostelium - BH2, norleucine complex

Zhuang, N.Lee, K.H.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Phenylalanine-4-hydroxylase
A, B
438Dictyostelium discoideumMutation(s): 0 
Gene Names: pahDDB_G0278781
EC: 1.14.16.1 (PDB Primary Data), 1.14.16.4 (PDB Primary Data)
UniProt
Find proteins for Q54XS1 (Dictyostelium discoideum)
Explore Q54XS1 
Go to UniProtKB:  Q54XS1
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ54XS1
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Ligands 4 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
PIN
Query on PIN

Download Ideal Coordinates CCD File 
C [auth A],
G [auth B]
PIPERAZINE-N,N'-BIS(2-ETHANESULFONIC ACID)
C8 H18 N2 O6 S2
IHPYMWDTONKSCO-UHFFFAOYSA-N
HBI
Query on HBI

Download Ideal Coordinates CCD File 
D [auth A],
H [auth B]
7,8-DIHYDROBIOPTERIN
C9 H13 N5 O3
FEMXZDUTFRTWPE-DZSWIPIPSA-N
NLE
Query on NLE

Download Ideal Coordinates CCD File 
F [auth A],
J [auth B]
NORLEUCINE
C6 H13 N O2
LRQKBLKVPFOOQJ-YFKPBYRVSA-N
FE
Query on FE

Download Ideal Coordinates CCD File 
E [auth A],
I [auth B]
FE (III) ION
Fe
VTLYFUHAOXGGBS-UHFFFAOYSA-N
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.39 Å
  • R-Value Free: 0.242 
  • R-Value Work: 0.165 
  • R-Value Observed: 0.169 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 71.516α = 90
b = 85.668β = 110.08
c = 73.482γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
HKL-2000data reduction
HKL-2000data scaling
AMoREphasing
Cootmodel building

Structure Validation

View Full Validation Report



Ligand Structure Quality Assessment 


Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National research foundationKorea, Republic Of--

Revision History  (Full details and data files)

  • Version 1.0: 2017-05-03
    Type: Initial release