Crystal structure of Pseudomonas aeruginosa S-adenosyl-L-homocysteine hydrolase inhibited by Cd2+ ions
Malecki, P.H., Gawel, M., Brzezinski, K.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Adenosylhomocysteinase | 472 | Pseudomonas aeruginosa PAO1 | Mutation(s): 0  Gene Names: ahcY, sahH, PA0432 EC: 3.3.1.1 | ||
UniProt | |||||
Find proteins for Q9I685 (Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)) Explore Q9I685  Go to UniProtKB:  Q9I685 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9I685 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 8 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NAD (Subject of Investigation/LOI) Query on NAD | E [auth A], JA [auth D], Q [auth B], Z [auth C] | NICOTINAMIDE-ADENINE-DINUCLEOTIDE C21 H27 N7 O14 P2 BAWFJGJZGIEFAR-NNYOXOHSSA-N | |||
ADN (Subject of Investigation/LOI) Query on ADN | AA [auth C], F [auth A], KA [auth D], R [auth B] | ADENOSINE C10 H13 N5 O4 OIRDTQYFTABQOQ-KQYNXXCUSA-N | |||
HEZ Query on HEZ | S [auth B] | HEXANE-1,6-DIOL C6 H14 O2 XXMIOPMDWAUFGU-UHFFFAOYSA-N | |||
CD (Subject of Investigation/LOI) Query on CD | FA [auth C] GA [auth C] HA [auth C] IA [auth C] L [auth A] | CADMIUM ION Cd WLZRMCYVCSSEQC-UHFFFAOYSA-N | |||
BU1 Query on BU1 | BA [auth C] CA [auth C] DA [auth C] G [auth A] H [auth A] | 1,4-BUTANEDIOL C4 H10 O2 WERYXYBDKMZEQL-UHFFFAOYSA-N | |||
PDO Query on PDO | I [auth A], J [auth A] | 1,3-PROPANDIOL C3 H8 O2 YPFDHNVEDLHUCE-UHFFFAOYSA-N | |||
K (Subject of Investigation/LOI) Query on K | EA [auth C], K [auth A], MA [auth D], T [auth B] | POTASSIUM ION K NPYPAHLBTDXSSS-UHFFFAOYSA-N | |||
CL Query on CL | SA [auth D] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Length ( Å ) | Angle ( ˚ ) |
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a = 176.97 | α = 90 |
b = 134.16 | β = 106.063 |
c = 108.88 | γ = 90 |
Software Name | Purpose |
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XDS | data reduction |
XSCALE | data scaling |
PHENIX | refinement |
PDB_EXTRACT | data extraction |
REFMAC | phasing |
Funding Organization | Location | Grant Number |
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Polish National Science Centre | Poland | SONATA BIS 2018/30/E/NZ1/00729 |