Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Gd1nbmg_ Alpha and beta proteins (a/b) Pyruvate kinase C-terminal domain-like ATP synthase (F1-ATPase), gamma subunit ATP synthase (F1-ATPase), gamma subunit F1 ATP synthase gamma subunit (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Ad1nbma1 All alpha proteins Left-handed superhelix C-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases C-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase alpha subunit, domain 3 (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Ad1nbma2 All beta proteins Domain of alpha and beta subunits of F1 ATP synthase-like N-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases N-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase alpha subunit, domain 1 (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Ad1nbma3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain) Central domain of alpha subunit of F1 ATP synthase (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Bd1nbmb1 All alpha proteins Left-handed superhelix C-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases C-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase alpha subunit, domain 3 (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Bd1nbmb2 All beta proteins Domain of alpha and beta subunits of F1 ATP synthase-like N-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases N-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase alpha subunit, domain 1 (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Bd1nbmb3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain) Central domain of alpha subunit of F1 ATP synthase (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Cd1nbmc1 All alpha proteins Left-handed superhelix C-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases C-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase alpha subunit, domain 3 (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Cd1nbmc2 All beta proteins Domain of alpha and beta subunits of F1 ATP synthase-like N-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases N-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase alpha subunit, domain 1 (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Cd1nbmc3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain) Central domain of alpha subunit of F1 ATP synthase (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Dd1nbmd1 All alpha proteins Left-handed superhelix C-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases C-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase beta subunit, domain 3 (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Dd1nbmd2 All beta proteins Domain of alpha and beta subunits of F1 ATP synthase-like N-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases N-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase beta subunit, domain 1 (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Dd1nbmd3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain) Central domain of beta subunit of F1 ATP synthase (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Fd1nbmf1 All alpha proteins Left-handed superhelix C-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases C-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase beta subunit, domain 3 (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Fd1nbmf2 All beta proteins Domain of alpha and beta subunits of F1 ATP synthase-like N-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases N-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase beta subunit, domain 1 (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Fd1nbmf3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain) Central domain of beta subunit of F1 ATP synthase (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Ed1nbme1 All alpha proteins Left-handed superhelix C-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases C-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase beta subunit, domain 3 (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Ed1nbme2 All beta proteins Domain of alpha and beta subunits of F1 ATP synthase-like N-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases N-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase beta subunit, domain 1 (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Ed1nbme3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain) Central domain of beta subunit of F1 ATP synthase (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyATP synthase alpha/beta C-terminal domain-like 8056868 3000684 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyRecA-like P-loop NTPases 8018243 3002019 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyATP synthase alpha/beta N-terminal domain-like 8018248 3001034 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyRecA-like P-loop NTPases 8018243 3002019 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyATP synthase alpha/beta N-terminal domain-like 8018248 3001034 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyATP synthase alpha/beta C-terminal domain-like 8056868 3000684 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyATP synthase alpha/beta C-terminal domain-like 8056868 3000684 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyRecA-like P-loop NTPases 8018243 3002019 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyATP synthase alpha/beta N-terminal domain-like 8018248 3001034 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyATP synthase alpha/beta N-terminal domain-like 8018258 3001034 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyRecA-like P-loop NTPases 8018253 3002019 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyATP synthase alpha/beta C-terminal domain-like 8056904 3000684 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyRecA-like P-loop NTPases 8018253 3002019 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyATP synthase alpha/beta C-terminal domain-like 8056904 3000684 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyATP synthase alpha/beta N-terminal domain-like 8018258 3001034 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyRecA-like P-loop NTPases 8018253 3002019 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyATP synthase alpha/beta N-terminal domain-like 8018258 3001034 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyATP synthase alpha/beta C-terminal domain-like 8056904 3000684 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
GATP-synte1nbmG1 A: a/b three-layered sandwichesX: ATP synthase (F1-ATPase), gamma subunit (From Topology)H: ATP synthase (F1-ATPase), gamma subunit (From Topology)T: ATP synthase (F1-ATPase), gamma subunitF: ATP-syntECOD (1.6)
AATP-synt_ab_Ne1nbmA1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: ATP-synt_ab_NECOD (1.6)
AATP-synt_ab_Ce1nbmA2 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: ATP-synt_ab_CECOD (1.6)
AATP-synt_abe1nbmA3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: ATP-synt_abECOD (1.6)
BATP-synt_ab_Ne1nbmB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: ATP-synt_ab_NECOD (1.6)
BATP-synt_ab_Ce1nbmB2 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: ATP-synt_ab_CECOD (1.6)
BATP-synt_abe1nbmB3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: ATP-synt_abECOD (1.6)
CATP-synt_ab_Ne1nbmC1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: ATP-synt_ab_NECOD (1.6)
CATP-synt_ab_Ce1nbmC2 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: ATP-synt_ab_CECOD (1.6)
CATP-synt_abe1nbmC3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: ATP-synt_abECOD (1.6)
DATP-synt_ab_Ne1nbmD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: ATP-synt_ab_NECOD (1.6)
DATP-synt_ab_Ce1nbmD3 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: ATP-synt_ab_CECOD (1.6)
DATP-synt_abe1nbmD2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: ATP-synt_abECOD (1.6)
FATP-synt_ab_Ne1nbmF1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: ATP-synt_ab_NECOD (1.6)
FATP-synt_ab_Ce1nbmF3 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: ATP-synt_ab_CECOD (1.6)
FATP-synt_abe1nbmF2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: ATP-synt_abECOD (1.6)
EATP-synt_ab_Ne1nbmE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: ATP-synt_ab_NECOD (1.6)
EATP-synt_ab_Ce1nbmE3 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: ATP-synt_ab_CECOD (1.6)
EATP-synt_abe1nbmE2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: ATP-synt_abECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
G1.10.287.80 Mainly Alpha Orthogonal Bundle Helix Hairpins ATP synthase, gamma subunit, helix hairpin domainCATH (4.3.0)
A2.40.30.20 Mainly Beta Beta Barrel Elongation Factor Tu (Ef-tu) domain 3CATH (4.3.0)
A3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (4.3.0)
A1.20.150.20 Mainly Alpha Up-down Bundle Lysin ATP synthase alpha/beta chain, C-terminal domainCATH (4.3.0)
B2.40.30.20 Mainly Beta Beta Barrel Elongation Factor Tu (Ef-tu) domain 3CATH (4.3.0)
B3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (4.3.0)
B1.20.150.20 Mainly Alpha Up-down Bundle Lysin ATP synthase alpha/beta chain, C-terminal domainCATH (4.3.0)
C2.40.30.20 Mainly Beta Beta Barrel Elongation Factor Tu (Ef-tu) domain 3CATH (4.3.0)
C3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (4.3.0)
C1.20.150.20 Mainly Alpha Up-down Bundle Lysin ATP synthase alpha/beta chain, C-terminal domainCATH (4.3.0)
D2.40.10.170 Mainly Beta Beta Barrel Thrombin, subunit H CATH (4.3.0)
D3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (4.3.0)
D1.10.1140.10 Mainly Alpha Orthogonal Bundle Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain Chain D, domain3CATH (4.3.0)
F2.40.10.170 Mainly Beta Beta Barrel Thrombin, subunit H CATH (4.3.0)
F3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (4.3.0)
F1.10.1140.10 Mainly Alpha Orthogonal Bundle Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain Chain D, domain3CATH (4.3.0)
E2.40.10.170 Mainly Beta Beta Barrel Thrombin, subunit H CATH (4.3.0)
E3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (4.3.0)
E1.10.1140.10 Mainly Alpha Orthogonal Bundle Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain Chain D, domain3CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00231ATP synthase (ATP-synt)ATP synthase- Domain
A, B, C
PF00006ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab)ATP synthase alpha/beta family, nucleotide-binding domainThis entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho.Domain
A, B, C
PF00306ATP synthase alpha/beta chain, C terminal domain (ATP-synt_ab_C)ATP synthase alpha/beta chain, C terminal domain- Domain
A, B, C
PF02874ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N)ATP synthase alpha/beta family, beta-barrel domainThis family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella.Domain
D, F
PF00006ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab)ATP synthase alpha/beta family, nucleotide-binding domainThis entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho.Domain
D, F
PF22919C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C)C-terminal domain of V and A type ATP synthaseThis entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases.Domain
D, F
PF02874ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N)ATP synthase alpha/beta family, beta-barrel domainThis family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella.Domain
PF00006ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab)ATP synthase alpha/beta family, nucleotide-binding domainThis entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho.Domain
PF22919C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C)C-terminal domain of V and A type ATP synthaseThis entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases.Domain
PF02874ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N)ATP synthase alpha/beta family, beta-barrel domainThis family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
F1-ATPASE
A, B, C
F1-ATPASE
D, F
F1-ATPASE
F1-ATPASE

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR023632ATP synthase, F1 complex, gamma subunit conserved siteConserved Site
IPR000131ATP synthase, F1 complex, gamma subunitFamily
IPR035968ATP synthase, F1 complex, gamma subunit superfamilyHomologous Superfamily
A, B, C
IPR038376ATP synthase, alpha subunit, C-terminal domain superfamilyHomologous Superfamily
A, B, C
IPR004100ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domainDomain
A, B, C
IPR033732ATP synthase, F1 complex, alpha subunit nucleotide-binding domainDomain
A, B, C
IPR036121ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamilyHomologous Superfamily
A, B, C
IPR023366ATP synthase subunit alpha, N-terminal domain-like superfamilyHomologous Superfamily
A, B, C
IPR000793ATP synthase, alpha subunit, C-terminalDomain
A, B, C
IPR020003ATPase, alpha/beta subunit, nucleotide-binding domain, active siteActive Site
A, B, C
IPR000194ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domainDomain
A, B, C
IPR005294ATP synthase, F1 complex, alpha subunitFamily
A, B, C
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
D, F
IPR004100ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domainDomain
D, F
IPR024034ATPase, F1/V1 complex, beta/alpha subunit, C-terminalHomologous Superfamily
D, F
IPR036121ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamilyHomologous Superfamily
D, F
IPR020003ATPase, alpha/beta subunit, nucleotide-binding domain, active siteActive Site
D, F
IPR050053ATPase alpha/beta chainsFamily
D, F
IPR000194ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domainDomain
D, F
IPR055190ATP synthase A/B type, C-terminal domainDomain
D, F
IPR003593AAA+ ATPase domainDomain
D, F
IPR005722ATP synthase, F1 complex, beta subunitFamily
D, F
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR004100ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domainDomain
IPR024034ATPase, F1/V1 complex, beta/alpha subunit, C-terminalHomologous Superfamily
IPR036121ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamilyHomologous Superfamily
IPR020003ATPase, alpha/beta subunit, nucleotide-binding domain, active siteActive Site
IPR050053ATPase alpha/beta chainsFamily
IPR000194ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domainDomain
IPR055190ATP synthase A/B type, C-terminal domainDomain
IPR003593AAA+ ATPase domainDomain
IPR005722ATP synthase, F1 complex, beta subunitFamily
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily