Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyL-arabinose binding protein-like 8020887 4000206 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyType 1 solute binding protein-like 8033267 3000125 SCOP2 (2022-06-29)
BSCOP2B SuperfamilyType 1 solute binding protein-like 8033267 3000125 SCOP2B (2022-06-29)
C [auth D]SCOP2 FamilyPositive regulator of the amidase operon AmiR 8031672 4003653 SCOP2 (2022-06-29)
C [auth D]SCOP2 SuperfamilyCheY-like 8044050 3001156 SCOP2 (2022-06-29)
D [auth E]SCOP2B SuperfamilyCheY-like 8044050 3001156 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APeripla_BP_6e1qo0A2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: Periplasmic binding protein-like IF: Peripla_BP_6ECOD (1.6)
APeripla_BP_5e1qo0A3 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: Periplasmic binding protein-like IF: Peripla_BP_5ECOD (1.6)
BPeripla_BP_6e1qo0B2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: Periplasmic binding protein-like IF: Peripla_BP_6ECOD (1.6)
BPeripla_BP_5e1qo0B3 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: Periplasmic binding protein-like IF: Peripla_BP_5ECOD (1.6)
C [auth D]ANTARe1qo0D2 A: alpha arraysX: RuvA-CH: ANTAR domain (From Topology)T: ANTAR domainF: ANTARECOD (1.6)
C [auth D]AmiRe1qo0D3 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: CheY-likeF: AmiRECOD (1.6)
D [auth E]ANTARe1qo0E1 A: alpha arraysX: RuvA-CH: ANTAR domain (From Topology)T: ANTAR domainF: ANTARECOD (1.6)
D [auth E]AmiRe1qo0E2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: CheY-likeF: AmiRECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF13433Periplasmic binding protein domain (Peripla_BP_5)Periplasmic binding protein domainThis domain is found in a variety of bacterial periplasmic binding proteins.Domain
C [auth D],
D [auth E]
PF21332AmiR, N-terminal (AmiR_N)AmiR, N-terminalThis is the N-terminal domain of Aliphatic amidase regulator (AmiR) which acts as a transcriptional antitermination factor. It positively controls AmiE, the gene for aliphatic amidase [1].Domain
C [auth D],
D [auth E]
PF03861ANTAR domain (ANTAR)ANTAR domainANTAR (AmiR and NasR transcription antitermination regulators) is an RNA-binding domain found in bacterial transcription antitermination regulatory proteins. The majority of the domain consists of a coiled-coil.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
AMIC -
C [auth D],
D [auth E]
AMIR -