1YOX | pdb_00001yox

Structure of the conserved Protein of Unknown Function PA3696 from Pseudomonas aeruginosa

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
F	d1yoxf_	All beta proteins	Double-stranded beta-helix	TRAP-like	PA3696/SPS0176-like	Hypothetical protein PA3696	(Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ],	SCOPe (2.08)
E	d1yoxe2	All beta proteins	Double-stranded beta-helix	TRAP-like	PA3696/SPS0176-like	Hypothetical protein PA3696	(Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ],	SCOPe (2.08)
E	d1yoxe3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ],	SCOPe (2.08)
D	d1yoxd2	All beta proteins	Double-stranded beta-helix	TRAP-like	PA3696/SPS0176-like	Hypothetical protein PA3696	(Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ],	SCOPe (2.08)
D	d1yoxd3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ],	SCOPe (2.08)
C	d1yoxc_	All beta proteins	Double-stranded beta-helix	TRAP-like	PA3696/SPS0176-like	Hypothetical protein PA3696	(Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ],	SCOPe (2.08)
B	d1yoxb2	All beta proteins	Double-stranded beta-helix	TRAP-like	PA3696/SPS0176-like	Hypothetical protein PA3696	(Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ],	SCOPe (2.08)
B	d1yoxb3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ],	SCOPe (2.08)
A	d1yoxa1	All beta proteins	Double-stranded beta-helix	TRAP-like	PA3696/SPS0176-like	Hypothetical protein PA3696	(Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
E	SCOP2B Superfamily	TRAP-like	8034813	3001865	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	TRAP-like	8034813	3001865	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	TRAP-like	8034813	3001865	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	TRAP-like	8034813	3001865	SCOP2B (2022-06-29)
A	SCOP2 Family	PA3696/SPS0176-like	8022433	4000973	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	TRAP-like	8034813	3001865	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F	AIM24	e1yoxF1	A: beta sandwiches	X: jelly-roll	H: Double-stranded beta-helix (From Topology)	T: Double-stranded beta-helix	F: AIM24	ECOD (1.6)
E	AIM24	e1yoxE2	A: beta sandwiches	X: jelly-roll	H: Double-stranded beta-helix (From Topology)	T: Double-stranded beta-helix	F: AIM24	ECOD (1.6)
D	AIM24	e1yoxD1	A: beta sandwiches	X: jelly-roll	H: Double-stranded beta-helix (From Topology)	T: Double-stranded beta-helix	F: AIM24	ECOD (1.6)
C	AIM24	e1yoxC1	A: beta sandwiches	X: jelly-roll	H: Double-stranded beta-helix (From Topology)	T: Double-stranded beta-helix	F: AIM24	ECOD (1.6)
B	AIM24	e1yoxB1	A: beta sandwiches	X: jelly-roll	H: Double-stranded beta-helix (From Topology)	T: Double-stranded beta-helix	F: AIM24	ECOD (1.6)
A	AIM24	e1yoxA1	A: beta sandwiches	X: jelly-roll	H: Double-stranded beta-helix (From Topology)	T: Double-stranded beta-helix	F: AIM24	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
F	3.60.160.10	Alpha Beta	4-Layer Sandwich	Double-stranded beta-helix	Mitochondrial biogenesis AIM24	CATH (4.3.0)
E	3.60.160.10	Alpha Beta	4-Layer Sandwich	Double-stranded beta-helix	Mitochondrial biogenesis AIM24	CATH (4.3.0)
D	3.60.160.10	Alpha Beta	4-Layer Sandwich	Double-stranded beta-helix	Mitochondrial biogenesis AIM24	CATH (4.3.0)
C	3.60.160.10	Alpha Beta	4-Layer Sandwich	Double-stranded beta-helix	Mitochondrial biogenesis AIM24	CATH (4.3.0)
B	3.60.160.10	Alpha Beta	4-Layer Sandwich	Double-stranded beta-helix	Mitochondrial biogenesis AIM24	CATH (4.3.0)
A	3.60.160.10	Alpha Beta	4-Layer Sandwich	Double-stranded beta-helix	Mitochondrial biogenesis AIM24	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F	PF01987	Mitochondrial biogenesis AIM24 (AIM24)	Mitochondrial biogenesis AIM24	-	Family

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR016031	Tryptophan RNA-binding attenuator protein-like domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR036983	Mitochondrial biogenesis AIM24 superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR002838	Mitochondrial biogenesis protein AIM24	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.