2AEG | pdb_00002aeg

X-Ray Crystal Structure of Protein Atu5096 from Agrobacterium tumefaciens. Northeast Structural Genomics Consortium Target AtR63.

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d2aega1	Alpha and beta proteins (a+b)	BB1717-like	BB1717-like	BB1717-like	Hypothetical protein Atu5096	(Agrobacterium fabrum str. C58 ) [TaxId: 176299 ],	SCOPe (2.08)
B	d2aegb_	Alpha and beta proteins (a+b)	BB1717-like	BB1717-like	BB1717-like	Hypothetical protein Atu5096	(Agrobacterium fabrum str. C58 ) [TaxId: 176299 ],	SCOPe (2.08)
C	d2aegc_	Alpha and beta proteins (a+b)	BB1717-like	BB1717-like	BB1717-like	Hypothetical protein Atu5096	(Agrobacterium fabrum str. C58 ) [TaxId: 176299 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	BB1717-like	8024563	4003435	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	BB1717-like	8036942	3000864	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	BB1717-like	8036942	3000864	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	BB1717-like	8036942	3000864	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	SRAP	e2aegA1	A: a+b complex topology	X: BB1717-like (From Topology)	H: BB1717-like (From Topology)	T: BB1717-like	F: SRAP	ECOD (1.6)
B	SRAP	e2aegB1	A: a+b complex topology	X: BB1717-like (From Topology)	H: BB1717-like (From Topology)	T: BB1717-like	F: SRAP	ECOD (1.6)
C	SRAP	e2aegC1	A: a+b complex topology	X: BB1717-like (From Topology)	H: BB1717-like (From Topology)	T: BB1717-like	F: SRAP	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.40.10.510	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
A	3.90.1680.20	Alpha Beta	Alpha-Beta Complex	hypothetical protein yedk fold		CATH (4.3.0)
A	6.10.250.570	Special	Helix non-globular	Single alpha-helices involved in coiled-coils or other helix-helix interfaces		CATH (4.3.0)
B	2.40.10.510	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
B	3.90.1680.20	Alpha Beta	Alpha-Beta Complex	hypothetical protein yedk fold		CATH (4.3.0)
B	6.10.250.570	Special	Helix non-globular	Single alpha-helices involved in coiled-coils or other helix-helix interfaces		CATH (4.3.0)
C	2.40.10.510	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
C	3.90.1680.20	Alpha Beta	Alpha-Beta Complex	hypothetical protein yedk fold		CATH (4.3.0)
C	6.10.250.570	Special	Helix non-globular	Single alpha-helices involved in coiled-coils or other helix-helix interfaces		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C	PF02586	SOS response associated peptidase (SRAP) (SRAP)	SOS response associated peptidase (SRAP)	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C	hypothetical protein AGR_pAT_140	lyase activity catalytic activity peptidase activity catalytic activity, acting on a protein hydrolase activity DNA binding binding single-stranded DNA binding nucleic acid binding	cellular response to stimulus response to stimulus primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular response to stress DNA damage response response to stress protein-DNA covalent cross-linking repair metabolic process cellular process macromolecule metabolic process DNA repair cellular response to stimulus response to stimulus primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular response to stress DNA damage response response to stress protein-DNA covalent cross-linking repair metabolic process cellular process macromolecule metabolic process DNA repair proteolysis protein metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C	IPR003738	SOS response associated peptidase (SRAP)	Family
A, B, C	IPR036590	SOS response associated peptidase-like	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.