2MME | pdb_00002mme

Hybrid structure of the Shigella flexneri MxiH Type three secretion system needle

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
Z	SCOP2B Superfamily	Type III secretion system needle-like	8074331	3000649	SCOP2B (2022-06-29)
Y	SCOP2B Superfamily	Type III secretion system needle-like	8074331	3000649	SCOP2B (2022-06-29)
X	SCOP2B Superfamily	Type III secretion system needle-like	8074331	3000649	SCOP2B (2022-06-29)
W	SCOP2B Superfamily	Type III secretion system needle-like	8074331	3000649	SCOP2B (2022-06-29)
V	SCOP2B Superfamily	Type III secretion system needle-like	8074331	3000649	SCOP2B (2022-06-29)
U	SCOP2B Superfamily	Type III secretion system needle-like	8074331	3000649	SCOP2B (2022-06-29)
T	SCOP2B Superfamily	Type III secretion system needle-like	8074331	3000649	SCOP2B (2022-06-29)
S	SCOP2B Superfamily	Type III secretion system needle-like	8074331	3000649	SCOP2B (2022-06-29)
R	SCOP2B Superfamily	Type III secretion system needle-like	8074331	3000649	SCOP2B (2022-06-29)
Q	SCOP2B Superfamily	Type III secretion system needle-like	8074331	3000649	SCOP2B (2022-06-29)
P	SCOP2B Superfamily	Type III secretion system needle-like	8074331	3000649	SCOP2B (2022-06-29)
O	SCOP2B Superfamily	Type III secretion system needle-like	8074331	3000649	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	Type III secretion system needle-like	8074331	3000649	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	Type III secretion system needle-like	8074331	3000649	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Type III secretion system needle-like	8074331	3000649	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Type III secretion system needle-like	8074331	3000649	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Type III secretion system needle-like	8074331	3000649	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Type III secretion system needle-like	8074331	3000649	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Type III secretion system needle-like	8074331	3000649	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Type III secretion system needle-like	8074331	3000649	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Type III secretion system needle-like	8074331	3000649	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Type III secretion system needle-like	8074331	3000649	SCOP2B (2022-06-29)
D	SCOP2 Family	MxiH-like	8074330	4001067	SCOP2 (2022-06-29)
D	SCOP2 Superfamily	Type III secretion system needle-like	8074331	3000649	SCOP2 (2022-06-29)
CA [auth c]	SCOP2B Superfamily	Type III secretion system needle-like	8074331	3000649	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Type III secretion system needle-like	8074331	3000649	SCOP2B (2022-06-29)
BA [auth b]	SCOP2B Superfamily	Type III secretion system needle-like	8074331	3000649	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Type III secretion system needle-like	8074331	3000649	SCOP2B (2022-06-29)
AA [auth a]	SCOP2B Superfamily	Type III secretion system needle-like	8074331	3000649	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Type III secretion system needle-like	8074331	3000649	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
Z	T3SS_needle_F	e2mmeZ1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
Y	T3SS_needle_F	e2mmeY1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
X	T3SS_needle_F	e2mmeX1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
W	T3SS_needle_F	e2mmeW1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
V	T3SS_needle_F	e2mmeV1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
U	T3SS_needle_F	e2mmeU1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
T	T3SS_needle_F	e2mmeT1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
S	T3SS_needle_F	e2mmeS1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
R	T3SS_needle_F	e2mmeR1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
Q	T3SS_needle_F	e2mmeQ1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
P	T3SS_needle_F	e2mmeP1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
O	T3SS_needle_F	e2mmeO1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
N	T3SS_needle_F	e2mmeN1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
M	T3SS_needle_F	e2mmeM1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
L	T3SS_needle_F	e2mmeL1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
K	T3SS_needle_F	e2mmeK1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
J	T3SS_needle_F	e2mmeJ1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
I	T3SS_needle_F	e2mmeI1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
H	T3SS_needle_F	e2mmeH1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
G	T3SS_needle_F	e2mmeG1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
F	T3SS_needle_F	e2mmeF1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
E	T3SS_needle_F	e2mmeE1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
D	T3SS_needle_F	e2mmeD1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
CA [auth c]	T3SS_needle_F	e2mmec1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
C	T3SS_needle_F	e2mmeC1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
BA [auth b]	T3SS_needle_F	e2mmeb1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
B	T3SS_needle_F	e2mmeB1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
AA [auth a]	T3SS_needle_F	e2mmea1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
A	T3SS_needle_F	e2mmeA1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z	PF09392	Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF (T3SS_needle_F)	Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z	MxiH	identical protein binding protein binding binding	establishment of protein localization nitrogen compound transport transport secretion protein secretion by the type III secretion system establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region transmembrane transport localization secretion by cell protein transmembrane transport protein transport establishment of protein localization nitrogen compound transport transport secretion protein secretion by the type III secretion system establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region transmembrane transport localization secretion by cell protein transmembrane transport protein transport macromolecule localization cellular process intracellular protein localization	cell surface cellular anatomical structure extracellular region protein-containing complex type III protein secretion system complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z	IPR037203	Type III secretion, needle-protein-like superfamily	Homologous Superfamily
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z	IPR021123	Type III secretion, needle-protein-like	Family
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z	IPR011841	Type III secretion system, needle protein	Family