3SZJ
Structure of the shwanavidin-biotin complex
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d3szjb1 | All beta proteins | Streptavidin-like | Avidin/streptavidin | automated matches | automated matches | (Shewanella denitrificans OS217 ) [TaxId: 318161 ], | SCOPe (2.08) |
B | d3szjb2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Shewanella denitrificans OS217 ) [TaxId: 318161 ], | SCOPe (2.08) |
A | d3szja1 | All beta proteins | Streptavidin-like | Avidin/streptavidin | automated matches | automated matches | (Shewanella denitrificans OS217 ) [TaxId: 318161 ], | SCOPe (2.08) |
A | d3szja2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Shewanella denitrificans OS217 ) [TaxId: 318161 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | Avidin | e3szjB1 | A: beta barrels | X: Lipocalins/Streptavidin | H: Avidin/Streptavidin (From Topology) | T: Avidin/Streptavidin | F: Avidin | ECOD (1.6) |
A | Avidin | e3szjA1 | A: beta barrels | X: Lipocalins/Streptavidin | H: Avidin/Streptavidin (From Topology) | T: Avidin/Streptavidin | F: Avidin | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 2.40.128.30 | Mainly Beta | Beta Barrel | Lipocalin | Avidin-like | CATH (4.3.0) |
A | 2.40.128.30 | Mainly Beta | Beta Barrel | Lipocalin | Avidin-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01382 | Avidin family (Avidin) | Avidin family | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Avidin/streptavidin | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036896 | Avidin-like superfamily | Homologous Superfamily | |
IPR005468 | Avidin/streptavidin | Family |