5L9V
HIF prolyl hydroxylase 2 (PHD2-R281C/P317C) cross-linked to HIF-1alpha NODD-L397C/D412C and N-oxalylglycine (NOG) (complex-1)
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | 2OG-FeII_Oxy_3 | e5l9vA1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: 2OG-FeII_Oxy_3 | ECOD (1.6) |
B | 2OG-FeII_Oxy_3 | e5l9vB1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: 2OG-FeII_Oxy_3 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.120.620 | Mainly Beta | Sandwich | Jelly Rolls | q2cbj1_9rhob like domain | CATH (4.3.0) |
B | 2.60.120.620 | Mainly Beta | Sandwich | Jelly Rolls | q2cbj1_9rhob like domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF13640 | 2OG-Fe(II) oxygenase superfamily (2OG-FeII_Oxy_3) | 2OG-Fe(II) oxygenase superfamily | This family contains members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR013655 | PAS fold-3 | Domain | |
IPR001321 | Hypoxia-inducible factor-1 alpha | Family | |
IPR035965 | PAS domain superfamily | Homologous Superfamily | |
IPR014887 | HIF-1 alpha, C-terminal transactivation domain | Domain | |
IPR000014 | PAS domain | Domain | |
IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain | Domain | |
IPR001610 | PAC motif | Repeat | |
IPR036638 | Helix-loop-helix DNA-binding domain superfamily | Homologous Superfamily | |
IPR021537 | Hypoxia-inducible factor, alpha subunit-like | Domain | |
IPR013767 | PAS fold | Domain | |
IPR006620 | Prolyl 4-hydroxylase, alpha subunit | Domain | |
IPR002893 | Zinc finger, MYND-type | Domain | |
IPR044862 | Prolyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domain | Domain | |
IPR051559 | Hypoxia-inducible factor prolyl hydroxylases | Family | |
IPR005123 | Oxoglutarate/iron-dependent dioxygenase domain | Domain |