Annotations: 5S53


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Cd5s53c1 Alpha and beta proteins (a/b) Tubulin nucleotide-binding domain-like Tubulin nucleotide-binding domain-like Tubulin, GTPase domain automated matches (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Cd5s53c2 Alpha and beta proteins (a+b) Bacillus chorismate mutase-like Tubulin C-terminal domain-like Tubulin, C-terminal domain automated matches (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Ad5s53a1 Alpha and beta proteins (a/b) Tubulin nucleotide-binding domain-like Tubulin nucleotide-binding domain-like Tubulin, GTPase domain automated matches (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Ad5s53a2 Alpha and beta proteins (a+b) Bacillus chorismate mutase-like Tubulin C-terminal domain-like Tubulin, C-terminal domain automated matches (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Bd5s53b1 Alpha and beta proteins (a/b) Tubulin nucleotide-binding domain-like Tubulin nucleotide-binding domain-like Tubulin, GTPase domain automated matches (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Bd5s53b2 Alpha and beta proteins (a+b) Bacillus chorismate mutase-like Tubulin C-terminal domain-like Tubulin, C-terminal domain automated matches (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Dd5s53d1 Alpha and beta proteins (a/b) Tubulin nucleotide-binding domain-like Tubulin nucleotide-binding domain-like Tubulin, GTPase domain automated matches (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Dd5s53d2 Alpha and beta proteins (a+b) Bacillus chorismate mutase-like Tubulin C-terminal domain-like Tubulin, C-terminal domain automated matches (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Ed5s53e_ All alpha proteins Non-globular all-alpha subunits of globular proteins Stathmin Stathmin Stathmin 4 Rat (Rattus norvegicus ) [TaxId: 10116 ], SCOPe (2.08)
Fd5s53f1 Alpha and beta proteins (a/b) PreATP-grasp domain PreATP-grasp domain Tubulin tyrosine ligase (TTL) N-terminal domain-like Tubulin tyrosine ligase (TTL) N-terminal domain Chicken (Gallus gallus ) [TaxId: 9031 ], SCOPe (2.08)
Fd5s53f2 Alpha and beta proteins (a+b) ATP-grasp Glutathione synthetase ATP-binding domain-like Tubulin tyrosine ligase (TTL) C-terminal domain-like Tubulin tyrosine ligase (TTL) C-terminal domain Chicken (Gallus gallus ) [TaxId: 9031 ], SCOPe (2.08)
Fd5s53f3 Artifacts Tags Tags Tags C-terminal Tags Chicken (Gallus gallus ) [TaxId: 9031 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2B SuperfamilyTubulin nucleotide-binding domain-like 8034383 3001758 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyTubulin C-terminal domain-like 8034385 3001732 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyTubulin nucleotide-binding domain-like 8034383 3001758 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyTubulin C-terminal domain-like 8034385 3001732 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyTubulin nucleotide-binding domain-like 8034386 3001758 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyTubulin C-terminal domain-like 8034387 3001732 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyTubulin nucleotide-binding domain-like 8034386 3001758 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyTubulin C-terminal domain-like 8034387 3001732 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyStathmin 8041515 3001374 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CTubulin_Ce5s53C1 A: a+b three layersX: Bacillus chorismate mutase-likeH: Tubulin C-terminal domain-like (From Topology)T: Tubulin C-terminal domain-likeF: Tubulin_CECOD (1.6)
CTubuline5s53C2 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Tubulin nucleotide-binding domain-likeF: TubulinECOD (1.6)
ATubulin_Ce5s53A2 A: a+b three layersX: Bacillus chorismate mutase-likeH: Tubulin C-terminal domain-like (From Topology)T: Tubulin C-terminal domain-likeF: Tubulin_CECOD (1.6)
ATubuline5s53A1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Tubulin nucleotide-binding domain-likeF: TubulinECOD (1.6)
BTubulin_Ce5s53B2 A: a+b three layersX: Bacillus chorismate mutase-likeH: Tubulin C-terminal domain-like (From Topology)T: Tubulin C-terminal domain-likeF: Tubulin_CECOD (1.6)
BTubuline5s53B1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Tubulin nucleotide-binding domain-likeF: TubulinECOD (1.6)
DTubulin_Ce5s53D1 A: a+b three layersX: Bacillus chorismate mutase-likeH: Tubulin C-terminal domain-like (From Topology)T: Tubulin C-terminal domain-likeF: Tubulin_CECOD (1.6)
DTubuline5s53D2 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Tubulin nucleotide-binding domain-likeF: TubulinECOD (1.6)
EStathmine5s53E1 A: extended segmentsX: Stathmin (From Topology)H: Stathmin (From Topology)T: StathminF: StathminECOD (1.6)
FTTLe5s53F1 A: a+b complex topologyX: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)H: Protein kinase/SAICAR synthase/ATP-graspT: ATP-graspF: TTLECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, C
PF00091Tubulin/FtsZ family, GTPase domain (Tubulin)Tubulin/FtsZ family, GTPase domainThis family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ...Domain
A, C
PF03953Tubulin C-terminal domain (Tubulin_C)Tubulin C-terminal domainThis family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tub ...Domain
B, D
PF00091Tubulin/FtsZ family, GTPase domain (Tubulin)Tubulin/FtsZ family, GTPase domainThis family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ...Domain
B, D
PF03953Tubulin C-terminal domain (Tubulin_C)Tubulin C-terminal domainThis family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tub ...Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, C
Tubulin alpha-1B chain
B, D
Tubulin beta-2B chain
Stathmin-4
Tubulin-Tyrosine Ligase---