Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
C [auth E]SCOP2B Superfamilyomega toxin-like 8082346 3000255 SCOP2B (2022-06-29)
D [auth F]SCOP2B Superfamilyomega toxin-like 8082346 3000255 SCOP2B (2022-06-29)
GSCOP2B Superfamilyomega toxin-like 8082346 3000255 SCOP2B (2022-06-29)
HSCOP2B Superfamilyomega toxin-like 8082346 3000255 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AIon_transe6n4qA1 A: alpha complex topologyX: Voltage-gated ion channels (From Topology)H: Voltage-gated ion channels (From Topology)T: Voltage-gated ion channelsF: Ion_transECOD (1.6)
BIon_transe6n4qB1 A: alpha complex topologyX: Voltage-gated ion channels (From Topology)H: Voltage-gated ion channels (From Topology)T: Voltage-gated ion channelsF: Ion_transECOD (1.6)
F [auth D]Ion_transe6n4qD1 A: alpha complex topologyX: Voltage-gated ion channels (From Topology)H: Voltage-gated ion channels (From Topology)T: Voltage-gated ion channelsF: Ion_transECOD (1.6)
E [auth C]Ion_transe6n4qC1 A: alpha complex topologyX: Voltage-gated ion channels (From Topology)H: Voltage-gated ion channels (From Topology)T: Voltage-gated ion channelsF: Ion_transECOD (1.6)
C [auth E]Toxin_12e6n4qE1 A: few secondary structure elementsX: omega toxin-likeH: omega toxin-relatedT: omega toxin-relatedF: Toxin_12ECOD (1.6)
D [auth F]Toxin_12e6n4qF1 A: few secondary structure elementsX: omega toxin-likeH: omega toxin-relatedT: omega toxin-relatedF: Toxin_12ECOD (1.6)
GToxin_12e6n4qG1 A: few secondary structure elementsX: omega toxin-likeH: omega toxin-relatedT: omega toxin-relatedF: Toxin_12ECOD (1.6)
HToxin_12e6n4qH1 A: few secondary structure elementsX: omega toxin-likeH: omega toxin-relatedT: omega toxin-relatedF: Toxin_12ECOD (1.6)
IC1-set_4e6n4qI1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_4ECOD (1.6)
IV-sete6n4qI2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-setECOD (1.6)
KC1-set_4e6n4qK1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_4ECOD (1.6)
KV-sete6n4qK2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-setECOD (1.6)
LC1-set_1e6n4qL1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_1ECOD (1.6)
LV-set_12e6n4qL2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_12ECOD (1.6)
JC1-set_1e6n4qJ2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_1ECOD (1.6)
JV-set_12e6n4qJ1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_12ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
I2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
K2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
L2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
J2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
I, K
Antibody Fab Fragment L-KAPPA Mus musculus (house mouse) IGKV4-53*01, IGKJ1*02, IGKC*01, IGKC*02 V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA IG FAB-GAMMA-2A_KAPPA IMGT (202442-0)
J, L
Antibody Fab Fragment VH-CH1 Mus musculus (house mouse) IGHV5-9-3*01, IGHJ4*01, IGHG2A*01, IGHG2A*02 V-DOMAIN VH, C-DOMAIN CH1 IG FAB-GAMMA-2A_KAPPA IMGT (202442-0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
I, K
Light ChainIGKV4 Kappanav1.7 vsd2-navab chimera | nav1.7 vsd2-navab chimera | beta/omega-theraphotoxin-tp2aSAbDab (2024-10-25)
J, L
Heavy ChainIGHV5 -nav1.7 vsd2-navab chimera | nav1.7 vsd2-navab chimera | beta/omega-theraphotoxin-tp2aSAbDab (2024-10-25)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
B,
E [auth C],
F [auth D]
PF08016Polycystin cation channel (PKD_channel)Polycystin cation channel- Family
A,
B,
E [auth C],
F [auth D]
PF00520Ion transport protein (Ion_trans)Ion transport protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
B,
E [auth C],
F [auth D]
Nav1.7 VSD2-NavAb chimera
C [auth E],
D [auth F],
G,
H
Beta/omega-theraphotoxin-Tp2a -
I, K
Fab light chain---
J, L
Fab heavy chain---

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A,
B,
E [auth C],
F [auth D]
PharosQ15858