Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
D [auth E]SCOP2B Superfamilyomega toxin-like 8082346 3000255 SCOP2B (2022-06-29)
E [auth F]SCOP2B Superfamilyomega toxin-like 8082346 3000255 SCOP2B (2022-06-29)
F [auth G]SCOP2B Superfamilyomega toxin-like 8082346 3000255 SCOP2B (2022-06-29)
G [auth H]SCOP2B Superfamilyomega toxin-like 8082346 3000255 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth B]Ion_transe6n4rB1 A: alpha complex topologyX: Voltage-gated ion channels (From Topology)H: Voltage-gated ion channels (From Topology)T: Voltage-gated ion channelsF: Ion_transECOD (1.6)
B [auth C]Ion_transe6n4rC1 A: alpha complex topologyX: Voltage-gated ion channels (From Topology)H: Voltage-gated ion channels (From Topology)T: Voltage-gated ion channelsF: Ion_transECOD (1.6)
L [auth A]Ion_transe6n4rA1 A: alpha complex topologyX: Voltage-gated ion channels (From Topology)H: Voltage-gated ion channels (From Topology)T: Voltage-gated ion channelsF: Ion_transECOD (1.6)
C [auth D]Ion_transe6n4rD1 A: alpha complex topologyX: Voltage-gated ion channels (From Topology)H: Voltage-gated ion channels (From Topology)T: Voltage-gated ion channelsF: Ion_transECOD (1.6)
D [auth E]Toxin_12e6n4rE1 A: few secondary structure elementsX: omega toxin-likeH: omega toxin-relatedT: omega toxin-relatedF: Toxin_12ECOD (1.6)
E [auth F]Toxin_12e6n4rF1 A: few secondary structure elementsX: omega toxin-likeH: omega toxin-relatedT: omega toxin-relatedF: Toxin_12ECOD (1.6)
F [auth G]Toxin_12e6n4rG1 A: few secondary structure elementsX: omega toxin-likeH: omega toxin-relatedT: omega toxin-relatedF: Toxin_12ECOD (1.6)
G [auth H]Toxin_12e6n4rH1 A: few secondary structure elementsX: omega toxin-likeH: omega toxin-relatedT: omega toxin-relatedF: Toxin_12ECOD (1.6)
H [auth I]C1-set_4e6n4rI2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_4ECOD (1.6)
H [auth I]V-sete6n4rI1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-setECOD (1.6)
J [auth K]C1-set_4e6n4rK2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_4ECOD (1.6)
J [auth K]V-sete6n4rK1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-setECOD (1.6)
I [auth J]C1-set_1e6n4rJ2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_1ECOD (1.6)
I [auth J]V-set_12e6n4rJ1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_12ECOD (1.6)
K [auth L]C1-set_1e6n4rL1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_1ECOD (1.6)
K [auth L]V-set_12e6n4rL2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_12ECOD (1.6)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
H [auth I],
J [auth K]
Antibody Fab Fragment L-KAPPA Mus musculus (house mouse) IGKV4-53*01, IGKJ1*02, IGKC*01, IGKC*02 V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA IG FAB-GAMMA-2A_KAPPA IMGT (202442-0)
I [auth J],
K [auth L]
Antibody Fab Fragment VH-CH1 Mus musculus (house mouse) IGHV5-9-3*01, IGHJ4*01, IGHG2A*01, IGHG2A*02 V-DOMAIN VH, C-DOMAIN CH1 IG FAB-GAMMA-2A_KAPPA IMGT (202442-0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
H [auth I],
J [auth K]
Light ChainIGKV4 Kappanav1.7 vsd2-navab chimera | nav1.7 vsd2-navab chimera | beta/omega-theraphotoxin-tp2aSAbDab (2024-10-25)
I [auth J],
K [auth L]
Heavy ChainIGHV5 -nav1.7 vsd2-navab chimera | nav1.7 vsd2-navab chimera | beta/omega-theraphotoxin-tp2aSAbDab (2024-10-25)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth B],
B [auth C],
C [auth D],
L [auth A]
PF08016Polycystin cation channel (PKD_channel)Polycystin cation channel- Family
A [auth B],
B [auth C],
C [auth D],
L [auth A]
PF00520Ion transport protein (Ion_trans)Ion transport protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth B],
B [auth C],
C [auth D],
L [auth A]
Nav1.7 VSD2-NavAb chimera
D [auth E],
E [auth F],
F [auth G],
G [auth H]
Beta/omega-theraphotoxin-Tp2a -
H [auth I],
J [auth K]
Fab light chain---
I [auth J],
K [auth L]
Fab heavy chain---

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A [auth B],
B [auth C],
C [auth D],
L [auth A]
PharosQ15858