7LAF | pdb_00007laf

15-lipoxygenase-2 loop mutant bound to imidazole-based inhibitor

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations
Membrane Protein Annotation: OPM

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Lipase/lipooxygenase domain (PLAT/LH2 domain)	8101096	3001168	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Lipoxygenase	8098116	3001410	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Lipoxygenase	8098116	3001410	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Lipase/lipooxygenase domain (PLAT/LH2 domain)	8101096	3001168	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PLAT	e7lafA2	A: beta sandwiches	X: jelly-roll	H: Lipase/lipooxygenase domain (PLAT/LH2 domain) (From Topology)	T: Lipase/lipooxygenase domain (PLAT/LH2 domain)	F: PLAT	ECOD (1.6)
A	Lipoxygenase	e7lafA1	A: alpha bundles	X: Lipoxygenase (From Topology)	H: Lipoxygenase (From Topology)	T: Lipoxygenase	F: Lipoxygenase	ECOD (1.6)
B	PLAT	e7lafB1	A: beta sandwiches	X: jelly-roll	H: Lipase/lipooxygenase domain (PLAT/LH2 domain) (From Topology)	T: Lipase/lipooxygenase domain (PLAT/LH2 domain)	F: PLAT	ECOD (1.6)
B	Lipoxygenase	e7lafB2	A: alpha bundles	X: Lipoxygenase (From Topology)	H: Lipoxygenase (From Topology)	T: Lipoxygenase	F: Lipoxygenase	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF00305	Lipoxygenase (Lipoxygenase)	Lipoxygenase		Domain
A, B	PF01477	PLAT/LH2 domain (PLAT)	PLAT/LH2 domain	This domain is found in a variety of membrane or lipid associated proteins. It is called the PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology) domain. The known structure of pancreatic lipase shows this domain bind ...	This domain is found in a variety of membrane or lipid associated proteins. It is called the PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology) domain. The known structure of pancreatic lipase shows this domain binds to procolipase Pfam:PF01114, which mediates membrane association. So it appears possible that this domain mediates membrane attachment via other protein binding partners. The structure of this domain is known for many members of the family and is composed of a beta sandwich.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Polyunsaturated fatty acid lipoxygenase ALOX15B	cation binding ion binding binding calcium ion binding metal ion binding small molecule binding oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen oxidoreductase activity linoleate 9S-lipoxygenase activity oxidoreductase activity, acting on single donors with incorporation of molecular oxygen catalytic activity dioxygenase activity arachidonate 15-lipoxygenase activity linoleate 13S-lipoxygenase activity cation binding ion binding binding calcium ion binding metal ion binding small molecule binding oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen oxidoreductase activity linoleate 9S-lipoxygenase activity oxidoreductase activity, acting on single donors with incorporation of molecular oxygen catalytic activity dioxygenase activity arachidonate 15-lipoxygenase activity linoleate 13S-lipoxygenase activity arachidonate 8(S)-lipoxygenase activity lipid binding transition metal ion binding iron ion binding	icosanoid metabolic process fatty acid metabolic process oxoacid metabolic process carboxylic acid metabolic process primary metabolic process organic acid metabolic process small molecule metabolic process metabolic process cellular process lipoxygenase pathway monocarboxylic acid metabolic process lipid metabolic process phospholipid metabolic process organophosphate metabolic process icosanoid metabolic process fatty acid metabolic process oxoacid metabolic process carboxylic acid metabolic process primary metabolic process organic acid metabolic process small molecule metabolic process metabolic process cellular process lipoxygenase pathway monocarboxylic acid metabolic process lipid metabolic process phospholipid metabolic process organophosphate metabolic process phosphate-containing compound metabolic process phosphorus metabolic process developmental process multicellular organismal process reproductive system development prostate gland development reproductive process gland development animal organ development urogenital system development developmental process involved in reproduction multicellular organism development anatomical structure development reproductive structure development system development apoptotic process cell death programmed cell death regulation of biological process regulation of cellular process negative regulation of cellular process biological regulation negative regulation of biological process negative regulation of cell cycle cell cycle regulation of cell cycle unsaturated fatty acid metabolic process long-chain fatty acid biosynthetic process lipid biosynthetic process organic acid biosynthetic process carboxylic acid biosynthetic process lipoxin biosynthetic process long-chain fatty acid metabolic process monocarboxylic acid biosynthetic process small molecule biosynthetic process lipoxin metabolic process fatty acid derivative biosynthetic process fatty acid biosynthetic process fatty acid derivative metabolic process unsaturated fatty acid biosynthetic process biosynthetic process lipoxin A4 biosynthetic process lipoxin A4 metabolic process regulation of developmental process cellular developmental process macrophage derived foam cell differentiation positive regulation of biological process regulation of cell differentiation positive regulation of developmental process foam cell differentiation positive regulation of cell differentiation cell differentiation regulation of macrophage derived foam cell differentiation positive regulation of macrophage derived foam cell differentiation positive regulation of cellular process cellular response to stimulus positive regulation of cell communication positive regulation of signal transduction response to stimulus intracellular receptor signaling pathway signaling regulation of signal transduction intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction signal transduction positive regulation of peroxisome proliferator activated receptor signaling pathway regulation of signaling positive regulation of intracellular signal transduction peroxisome proliferator activated receptor signaling pathway regulation of response to stimulus regulation of cell communication regulation of peroxisome proliferator activated receptor signaling pathway nuclear receptor-mediated signaling pathway positive regulation of signaling positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of biosynthetic process regulation of cytokine production cytokine production regulation of multicellular organismal process positive regulation of macromolecule metabolic process regulation of biosynthetic process regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of chemokine production regulation of gene expression positive regulation of gene expression chemokine production positive regulation of chemokine production positive regulation of multicellular organismal process regulation of macromolecule biosynthetic process macromolecule metabolic process positive regulation of cytokine production regulation of metabolic process negative regulation of locomotion regulation of cell motility regulation of locomotion regulation of cell migration negative regulation of cell motility cell migration cell motility negative regulation of cell migration locomotion negative regulation of cell population proliferation cell population proliferation regulation of cell population proliferation arachidonate metabolic process olefinic compound metabolic process hepoxilin metabolic process hepoxilin biosynthetic process linoleic acid metabolic process positive regulation of keratinocyte differentiation regulation of epidermal cell differentiation epidermis development epithelial cell differentiation regulation of epithelial cell differentiation epithelium development regulation of multicellular organismal development epidermal cell differentiation positive regulation of epidermis development tissue development positive regulation of epithelial cell differentiation skin development keratinocyte differentiation regulation of epidermis development regulation of keratinocyte differentiation positive regulation of epidermal cell differentiation cannabinoid biosynthetic process regulation of growth negative regulation of growth growth cannabinoid signaling pathway endocannabinoid signaling pathway G protein-coupled receptor signaling pathway lipid modification lipid oxidation	cellular anatomical structure anchoring junction cell junction focal adhesion cell-substrate junction membrane extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle extracellular space vesicle cellular anatomical structure anchoring junction cell junction focal adhesion cell-substrate junction membrane extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle extracellular space vesicle extracellular membrane-bounded organelle intracellular anatomical structure cytoplasm cytosol cell periphery plasma membrane cell-cell junction adherens junction intracellular organelle cytoskeleton membraneless organelle intracellular membraneless organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR020834	Lipoxygenase, conserved site	Conserved Site
A, B	IPR001024	PLAT/LH2 domain	Domain
A, B	IPR001885	Lipoxygenase, mammalian	Family
A, B	IPR042062	Lipoxygenase, vertebrates, PLAT domain	Domain
A, B	IPR036392	PLAT/LH2 domain superfamily	Homologous Superfamily
A, B	IPR036226	Lipoxigenase, C-terminal domain superfamily	Homologous Superfamily
A, B	IPR000907	Lipoxygenase	Family
A, B	IPR020833	Lipoxygenase, iron binding site	Binding Site
A, B	IPR013819	Lipoxygenase, C-terminal	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B	Pharos: O15296	breast cancer facioscapulohumeral muscular dystrophy lung cancer ovarian cancer cystic fibrosis glioblastoma lung carcinoma psoriasis esophageal adenocarcinoma lung adenocarcinoma non-small cell lung carcinoma sarcoidosis

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A, B	OPM	Monotopic/peripheral	All alpha monotopic/peripheral	Lipoxygenase	Lipoxygenases

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.