8SEN

Cryo-EM Structure of RyR1


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ESCOP2B SuperfamilyRotamase-like8034864 3000622 SCOP2B (2021-05-27)
GSCOP2B SuperfamilyRotamase-like8034864 3000622 SCOP2B (2021-05-27)
HSCOP2B SuperfamilyRotamase-like8034864 3000622 SCOP2B (2021-05-27)
FSCOP2B SuperfamilyRotamase-like8034864 3000622 SCOP2B (2021-05-27)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
EPF00254e8senE1 A: a+b two layersX: FKBP-likeH: FKBP-likeT: FKBP-likeF: PF00254ECOD (1.6)
GPF00254e8senG1 A: a+b two layersX: FKBP-likeH: FKBP-likeT: FKBP-likeF: PF00254ECOD (1.6)
HPF00254e8senH1 A: a+b two layersX: FKBP-likeH: FKBP-likeT: FKBP-likeF: PF00254ECOD (1.6)
FPF00254e8senF1 A: a+b two layersX: FKBP-likeH: FKBP-likeT: FKBP-likeF: PF00254ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF00622SPRY domain (SPRY)SPRY domain- Family
A, B, C, D
PF08454RyR and IP3R Homology associated (RIH_assoc)RyR and IP3R Homology associated- Repeat
A, B, C, D
PF02815MIR domain (MIR)MIR domainThe MIR (protein mannosyltransferase, IP3R and RyR) domain is a domain that may have a ligand transferase function [1].Domain
A, B, C, D
PF21119Ryanodine receptor junctional solenoid repeat (RYDR_Jsol)Ryanodine receptor junctional solenoid repeatThis entry represents a region of the Ryanodine receptor composed of alpha helical ARM repeats [1]. This region has been termed the Junctional solenoid region (Jsol) [1].Domain
A, B, C, D
PF01365RIH domain (RYDR_ITPR)RIH domain- Repeat
A, B, C, D
PF02026RyR domain (RyR)RyR domain- Family
E, F, G, H
PF00254FKBP-type peptidyl-prolyl cis-trans isomerase (FKBP_C)FKBP-type peptidyl-prolyl cis-trans isomerase- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
Ryanodine receptor 1
E, F, G, H
Glutathione S-transferase class-mu 26 kDa isozyme,Peptidyl-prolyl cis-trans isomerase FKBP1B

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR036300Mir domain superfamilyHomologous Superfamily
A, B, C, D
IPR000699RIH domainDomain
A, B, C, D
IPR013662RyR/IP3R Homology associated domainDomain
A, B, C, D
IPR016093MIR motifDomain
A, B, C, D
IPR013320Concanavalin A-like lectin/glucanase domain superfamilyHomologous Superfamily
A, B, C, D
IPR003877SPRY domainDomain
A, B, C, D
IPR001870B30.2/SPRY domainDomain
A, B, C, D
IPR009460Ryanodine Receptor TM 4-6Domain
A, B, C, D
IPR015925Ryanodine/Inositol 1,4,5-trisphosphate receptorFamily
A, B, C, D
IPR048581Ryanodine receptor, junctional solenoid domainDomain
A, B, C, D
IPR035910RyR/IP3 receptor binding core, RIH domain superfamilyHomologous Superfamily
A, B, C, D
IPR003032Ryanodine receptor RyrDomain
A, B, C, D
IPR035761Ryanodine receptor, SPRY domain 1Domain
A, B, C, D
IPR014821Inositol 1,4,5-trisphosphate/ryanodine receptorDomain
A, B, C, D
IPR035764Ryanodine receptor, SPRY domain 2Domain
A, B, C, D
IPR013333Ryanodine receptorFamily
A, B, C, D
IPR043136B30.2/SPRY domain superfamilyHomologous Superfamily
A, B, C, D
IPR011992EF-hand domain pairHomologous Superfamily
A, B, C, D
IPR005821Ion transport domainDomain
A, B, C, D
IPR035762Ryanodine receptor, SPRY domain 3Domain
E, F, G, H
IPR004046Glutathione S-transferase, C-terminalDomain
E, F, G, H
IPR010987Glutathione S-transferase, C-terminal-likeDomain
E, F, G, H
IPR036282Glutathione S-transferase, C-terminal domain superfamilyHomologous Superfamily
E, F, G, H
IPR004045Glutathione S-transferase, N-terminalDomain
E, F, G, H
IPR036249Thioredoxin-like superfamilyHomologous Superfamily
E, F, G, H
IPR040079Glutathione transferase familyFamily
E, F, G, H
IPR046357Peptidyl-prolyl cis-trans isomerase domain superfamilyHomologous Superfamily
E, F, G, H
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainDomain

Membrane Protein Annotation: OPM OPM Database Homepage