8ZD5 | pdb_00008zd5

Crystal structure of E40K variant of Cu/Zn-superoxide dismutase from dog (Canis familiaris) in the holo form complexed with 22E1 Fv-clasp

External Resource: Annotation


SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
A [auth H],
C [auth E],
H [auth B],
K		Heavy ChainIGHV14 -superoxide dismutase [cu-zn]SAbDab (2025-03-21)
B [auth F],
I [auth C],
J [auth L],
L [auth I]		Light ChainIGKV14 Kappasuperoxide dismutase [cu-zn]SAbDab (2025-03-21)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth H],
C [auth E],
H [auth B],
K		PF07686Immunoglobulin V-set domain (V-set)Immunoglobulin V-set domainThis domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. Domain
B [auth F],
I [auth C],
J [auth L],
L [auth I]		PF07686Immunoglobulin V-set domain (V-set)Immunoglobulin V-set domainThis domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. Domain
D [auth A],
E [auth D],
F [auth G],
G [auth J]		PF00080Copper/zinc superoxide dismutase (SODC) (Sod_Cu)Copper/zinc superoxide dismutase (SODC)superoxide dismutases (SODs) catalyse the conversion of superoxide radicals to hydrogen peroxide and molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the copper/zinc-binding family is one. Defects in the human SOD ...Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth H],
C [auth E],
H [auth B],
K		22E1VH-SARAH-
B [auth F],
I [auth C],
J [auth L],
L [auth I]		22E1VL-SARAH- - -
D [auth A],
E [auth D],
F [auth G],
G [auth J]		Superoxide dismutase [Cu-Zn]

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth H],
C [auth E],
H [auth B],
K		IPR050199Immunoglobulin Heavy VariableFamily
A [auth H],
C [auth E],
H [auth B],
K		IPR013783Immunoglobulin-like foldHomologous Superfamily
A [auth H],
C [auth E],
H [auth B],
K		IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
A [auth H],
C [auth E],
H [auth B],
K		IPR013106Immunoglobulin V-set domainDomain
A [auth H],
C [auth E],
H [auth B],
K		IPR007110Immunoglobulin-like domainDomain
B [auth F],
I [auth C],
J [auth L],
L [auth I]		IPR050150Immunoglobulin Variable Light ChainFamily
B [auth F],
I [auth C],
J [auth L],
L [auth I]		IPR013783Immunoglobulin-like foldHomologous Superfamily
B [auth F],
I [auth C],
J [auth L],
L [auth I]		IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
B [auth F],
I [auth C],
J [auth L],
L [auth I]		IPR013106Immunoglobulin V-set domainDomain
B [auth F],
I [auth C],
J [auth L],
L [auth I]		IPR003599Immunoglobulin domain subtypeDomain
B [auth F],
I [auth C],
J [auth L],
L [auth I]		IPR007110Immunoglobulin-like domainDomain
D [auth A],
E [auth D],
F [auth G],
G [auth J]		IPR024134Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperoneFamily
D [auth A],
E [auth D],
F [auth G],
G [auth J]		IPR036423Superoxide dismutase-like, copper/zinc binding domain superfamilyHomologous Superfamily
D [auth A],
E [auth D],
F [auth G],
G [auth J]		IPR018152Superoxide dismutase, copper/zinc, binding siteBinding Site
D [auth A],
E [auth D],
F [auth G],
G [auth J]		IPR001424Superoxide dismutase, copper/zinc binding domainDomain