Solution structure of ribosomal protein S17E from Methanobacterium Thermoautotrophicum, Northeast Structural Genomics Consortium Target TT802 / Ontario Center for Structural Proteomics Target Mth0803
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 3D_15N-separated_NOESY | 1 mM mth0803, U-15N,13C; 450 mM NaCl, 25 mM Na2PO4, 1mM Benzamidine, 1xinhibitor cooktail, 0.01% NaN3, 95% H2O, 5% D2O | 95% H2O/5% D2O | 450 mM NaCl, 25 mM Phosphate buffer | 6.5 | ambient | 298 | |
| 2 | 3D_13C-separated_NOESY | 1 mM mth0803, U-15N,13C; 450 mM NaCl, 25 mM Na2PO4, 1mM Benzamidine, 1xinhibitor cooktail, 0.01% NaN3, 95% H2O, 5% D2O | 95% H2O/5% D2O | 450 mM NaCl, 25 mM Phosphate buffer | 6.5 | ambient | 298 | |
| 3 | 4D_13C-separated_NOESY | 1 mM mth0803, U-15N,13C; 450 mM NaCl, 25 mM Na2PO4, 1mM Benzamidine, 1xinhibitor cooktail, 0.01% NaN3, 95% H2O, 5% D2O | 95% H2O/5% D2O | 450 mM NaCl, 25 mM Phosphate buffer | 6.5 | ambient | 298 | |
| 4 | HNHA | 1 mM mth0803, U-15N,13C; 450 mM NaCl, 25 mM Na2PO4, 1mM Benzamidine, 1xinhibitor cooktail, 0.01% NaN3, 95% H2O, 5% D2O | 95% H2O/5% D2O | 450 mM NaCl, 25 mM Phosphate buffer | 6.5 | ambient | 298 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Varian | INOVA | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| torsion angle dyanmics | 1143 NOE-derived distance constraints and 159 angle constraints (PHI and PSI) | NMRPipe |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the least restraint violations,target function |
| Conformers Calculated Total Number | 112 |
| Conformers Submitted Total Number | 15 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | processing | NMRPipe | 2.1 | Delaglio,F. |
| 2 | structure solution | AutoStructure | 2.0 | Huang, Y.J., Montelione, G.T. |
| 3 | refinement | DYANA | 1.5 | Gunter,P. |
| 4 | refinement | CNS | 1.0 | Brunger, A.T. et al. |














