1UBS

TRYPTOPHAN SYNTHASE (E.C.4.2.1.20) WITH A MUTATION OF LYS 87->THR IN THE B SUBUNIT AND IN THE PRESENCE OF LIGAND L-SERINE


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
17.8pH 7.8
Crystal Properties
Matthews coefficientSolvent content
2.6854.15

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 184.2α = 90
b = 61.8β = 94.8
c = 67.8γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray295IMAGE PLATERIGAKU RAXIS IIC1993-05-19M
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODERIGAKU RU2001.5418

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.92089.80.0792.556520

Refinement

Statistics
Diffraction IDStructure Solution MethodResolution (High)Resolution (Low)Cut-off Sigma (F)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTION1.9825006084.90.186
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_orthonormal_tor28.5
p_staggered_tor20.3
p_planar_tor7.2
p_scangle_it6.22
p_scbond_it4.17
p_mcangle_it3.24
p_mcbond_it2.13
p_multtor_nbd0.223
p_xhyhbond_nbd0.215
p_singtor_nbd0.193
RMS Deviations
KeyRefinement Restraint Deviation
p_orthonormal_tor28.5
p_staggered_tor20.3
p_planar_tor7.2
p_scangle_it6.22
p_scbond_it4.17
p_mcangle_it3.24
p_mcbond_it2.13
p_multtor_nbd0.223
p_xhyhbond_nbd0.215
p_singtor_nbd0.193
p_chiral_restr0.11
p_planar_d0.051
p_angle_d0.037
p_plane_restr0.014
p_bond_d0.012
p_angle_deg
p_hb_or_metal_coord
p_xyhbond_nbd
p_transverse_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms4889
Nucleic Acid Atoms
Solvent Atoms254
Heterogen Atoms23

Software

Software
Software NamePurpose
R-AXISIICdata collection
PROLSQrefinement
R-AXISdata reduction