3MN7

Structures of actin-bound WH2 domains of Spire and the implication for filament nucleation


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP6.62770.2M Ammonium formate pH 6.6 20%PEG 3350, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Crystal Properties
Matthews coefficientSolvent content
2.4149.03

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 125.82α = 90
b = 125.82β = 90
c = 56.02γ = 120
Symmetry
Space GroupP 65

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray90CCDMAR CCD 165 mmLN2 cooled fixed-exit Si(111) monochromator2010-03-27MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSLS BEAMLINE X10SA0.9792SLSX10SA

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
125086.40.03305222637122
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
22.236.90.2364

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT25023718126872.650.256610.25560.27551RANDOM57.809
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.520.260.52-0.79
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.753
r_dihedral_angle_4_deg16.443
r_dihedral_angle_3_deg14.853
r_dihedral_angle_1_deg4.505
r_angle_refined_deg0.919
r_mcangle_it0.56
r_mcbond_it0.314
r_scangle_it0.172
r_scbond_it0.091
r_chiral_restr0.057
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.753
r_dihedral_angle_4_deg16.443
r_dihedral_angle_3_deg14.853
r_dihedral_angle_1_deg4.505
r_angle_refined_deg0.919
r_mcangle_it0.56
r_mcbond_it0.314
r_scangle_it0.172
r_scbond_it0.091
r_chiral_restr0.057
r_bond_refined_d0.006
r_gen_planes_refined0.003
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2967
Nucleic Acid Atoms
Solvent Atoms62
Heterogen Atoms32

Software

Software
Software NamePurpose
MAR345data collection
MOLREPphasing
REFMACrefinement
XDSdata reduction
XSCALEdata scaling