5FU5

The complexity of the Ruminococcus flavefaciens cellulosome reflects an expansion in glycan recognition


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1100 MM CITRIC ACID PH 3.5 2.0M AMMONIUM SULFATE
Crystal Properties
Matthews coefficientSolvent content
3.4465

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 69.908α = 90
b = 69.908β = 90
c = 123.064γ = 120
Symmetry
Space GroupP 61 2 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS 2M2013-10-06MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONDIAMOND BEAMLINE I04-1DiamondI04-1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.543.1699.80.0618.310.6290901.5
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.51.5399.21.22.32.3

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUTNONE1.560.5427613142999.410.18790.186190.22122RANDOM22.358
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.130.060.13-0.41
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.284
r_sphericity_free29.888
r_sphericity_bonded11.309
r_dihedral_angle_3_deg9.379
r_dihedral_angle_1_deg7.516
r_mcangle_it3.274
r_scbond_it2.888
r_rigid_bond_restr2.741
r_mcbond_it2.689
r_mcbond_other2.431
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.284
r_sphericity_free29.888
r_sphericity_bonded11.309
r_dihedral_angle_3_deg9.379
r_dihedral_angle_1_deg7.516
r_mcangle_it3.274
r_scbond_it2.888
r_rigid_bond_restr2.741
r_mcbond_it2.689
r_mcbond_other2.431
r_angle_refined_deg1.571
r_angle_other_deg0.874
r_chiral_restr0.089
r_bond_refined_d0.014
r_gen_planes_refined0.007
r_bond_other_d0.002
r_gen_planes_other0.002
r_dihedral_angle_4_deg
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcangle_other
r_scbond_other
r_scangle_it
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms846
Nucleic Acid Atoms
Solvent Atoms116
Heterogen Atoms

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
Aimlessdata scaling
SHELXCDEphasing