Ligand validation:1RKD

RIB: alpha-D-ribofuranose

RIB is a Ligand Of Interest in 1RKD designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
1RKD_RIB_A_311	79%	39%	0.105	0.95	0.86	1.52	-	3	0	0	100%	1
1RK2_RIB_B_311	96%	55%	0.064	0.974	0.84	0.9	-	1	0	0	100%	1
1GQT_RIB_D_1310	87%	43%	0.087	0.96	0.79	1.38	-	2	0	0	100%	1
1RKS_RIB_A_311	44%	13%	0.18	0.907	0.92	2.96	-	2	0	0	100%	1
3GO6_RIB_A_305	94%	43%	0.08	0.977	0.7	1.48	-	2	0	0	100%	1
6WK0_RIB_B_401	91%	26%	0.078	0.964	0.76	2.2	-	2	1	0	100%	1
1YOE_RIB_A_2001	88%	51%	0.092	0.968	0.4	1.47	-	3	0	0	100%	0.35
6ZK3_RIB_A_402	81%	14%	0.069	0.919	2.35	1.55	5	3	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.