SOG: octyl 1-thio-beta-D-glucopyranoside
SOG is a Ligand Of Interest in 2YCY designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2YCY_SOG_A_1360 | 22% | 52% | 0.303 | 0.923 | 0.63 | 1.2 | - | 2 | 3 | 0 | 100% | 1 |
| 2YCY_SOG_A_1361 | 6% | 42% | 0.367 | 0.809 | 1.23 | 1.02 | 2 | 3 | 5 | 0 | 100% | 1 |
| 2YCY_SOG_B_1360 | 5% | 31% | 0.359 | 0.764 | 1.63 | 1.12 | 3 | 2 | 0 | 0 | 100% | 1 |
| 2YCY_SOG_B_1362 | 4% | 31% | 0.324 | 0.717 | 1.18 | 1.56 | 3 | 3 | 4 | 0 | 100% | 1 |
| 2YCY_SOG_B_1361 | 4% | 31% | 0.327 | 0.697 | 1.61 | 1.17 | 4 | 1 | 3 | 0 | 100% | 1 |
| 2VT4_SOG_A_403 | 67% | 60% | 0.141 | 0.95 | 0.59 | 0.92 | - | - | 0 | 0 | 100% | 1 |
| 2YCX_SOG_B_1362 | 5% | 34% | 0.342 | 0.741 | 1.35 | 1.28 | 2 | 3 | 1 | 0 | 100% | 1 |
| 2YCZ_SOG_B_1360 | 2% | 40% | 0.43 | 0.672 | 1.25 | 1.08 | 2 | 2 | 0 | 0 | 100% | 1 |
| 6TOS_SOG_B_406 | 70% | 81% | 0.109 | 0.927 | 0.31 | 0.51 | - | - | 0 | 0 | 100% | 1 |
| 6YU6_SOG_A_507 | 64% | 91% | 0.138 | 0.937 | 0.18 | 0.39 | - | - | 3 | 0 | 100% | 1 |
| 6TOT_SOG_A_405 | 55% | 44% | 0.159 | 0.929 | 0.91 | 1.24 | 1 | 1 | 0 | 0 | 100% | 1 |
| 5G53_SOG_A_501 | 54% | 39% | 0.17 | 0.937 | 1.01 | 1.37 | 1 | 3 | 0 | 0 | 100% | 1 |
| 3VHZ_SOG_A_430 | 53% | 27% | 0.144 | 0.906 | 1.73 | 1.21 | 5 | 2 | 0 | 0 | 100% | 1 |
