PLP: PYRIDOXAL-5'-PHOSPHATE

PLP is a Ligand Of Interest in 3II0 designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3II0_PLP_D_4Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3II0_PLP_D_4Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3II0_PLP_D_4Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
3II0_PLP_D_4 87% 22% 0.114 0.9871.14 2.05 1 600100%1
3II0_PLP_C_3 86% 14% 0.119 0.9881.23 2.55 2 700100%1
3II0_PLP_A_1 85% 24% 0.119 0.9861.41 1.71 3 510100%1
3II0_PLP_B_2 84% 21% 0.122 0.9861.46 1.85 3 400100%1
8Z0E_PLP_B_501 84% 33% 0.091 0.9511.24 1.42 3 300100%1
6DND_PLP_B_502 68% 7% 0.162 0.9732.89 1.97 6 640100%0.875
6LIG_PLP_B_501 44% 37% 0.22 0.9511.18 1.3 1 300100%1
6DNA_PLP_D_502 22% 10% 0.285 0.9012.42 1.93 3 620100%0.875
2BIE_PLP_A_1361 100% 38% 0.024 0.9961.23 1.19 1 310100%1
2X3L_PLP_A_1211 100% 19% 0.024 0.9951.74 1.73 2 210100%1
3CEJ_PLP_A_832 100% 41% 0.021 0.9981.23 1.05 1 280100%1
3CEM_PLP_A_832 100% 41% 0.021 0.9971.24 1.04 2 210100%1
4PPM_PLP_A_902 100% 7% 0.019 0.9982.88 1.91 9 600100%1