Ligand validation:4L28

PLP: PYRIDOXAL-5'-PHOSPHATE

PLP is a Ligand Of Interest in 4L28 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
4L28_PLP_D_601	51%	5%	0.204	0.96	3.42	1.99	7	5	2	0	100%	0.9375
4L28_PLP_C_601	44%	5%	0.202	0.931	3.4	2.11	8	7	2	0	100%	0.9375
4L28_PLP_A_601	41%	5%	0.234	0.95	3.31	2.03	7	5	2	0	100%	0.9375
4L28_PLP_B_601	39%	4%	0.23	0.939	3.44	2.18	7	7	2	0	100%	0.9375
4COO_PLP_B_1543	81%	7%	0.127	0.979	2.37	2.47	4	11	3	0	100%	0.9375
7QGT_PLP_A_1001	59%	65%	0.199	0.983	0.58	0.77	-	-	0	0	100%	0.9375
4L3V_PLP_C_601	49%	33%	0.196	0.942	1.14	1.5	1	2	4	0	100%	0.9375
4L27_PLP_D_601	42%	39%	0.243	0.965	1.26	1.11	1	1	3	0	100%	0.9375
4L0D_PLP_A_601	40%	42%	0.206	0.918	1.03	1.23	1	2	3	0	100%	0.9375
2BIE_PLP_B_1361	100%	28%	0.039	0.989	1.48	1.39	4	3	1	0	100%	0.9375
9J0V_PLP_A_301	100%	36%	0.037	0.987	0.82	1.68	-	5	0	0	100%	0.9375
4NOG_PLP_A_501	100%	38%	0.042	0.992	1.24	1.18	3	1	0	0	100%	1
3WQC_PLP_B_402	100%	21%	0.045	0.993	1.96	1.38	4	4	0	0	100%	0.9375
4HT3_PLP_B_401	100%	15%	0.045	0.993	2.04	1.72	3	5	0	0	100%	0.9375

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.