Ligand validation:7MD1

PLP: PYRIDOXAL-5'-PHOSPHATE

PLP is a Ligand Of Interest in 7MD1 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
7MD1_PLP_H_402	11%	61%	0.357	0.881	0.8	0.68	-	-	1	0	100%	0.6834
7MD8_PLP_H_401	31%	62%	0.221	0.889	0.75	0.7	-	-	0	0	100%	0.7284
7MCP_PLP_H_401	31%	69%	0.265	0.934	0.67	0.51	-	-	0	0	100%	0.6619
7MD0_PLP_H_401	30%	58%	0.196	0.861	0.89	0.72	-	-	1	0	100%	0.6347
7MCB_PLP_H_401	26%	62%	0.228	0.872	0.74	0.71	-	-	0	0	100%	0.6909
7MCN_PLP_H_401	23%	66%	0.285	0.911	0.71	0.6	-	-	1	0	100%	0.7369
2BIE_PLP_B_1361	100%	28%	0.039	0.989	1.48	1.39	4	3	1	0	100%	0.9375
9J0V_PLP_A_301	100%	36%	0.037	0.987	0.82	1.68	-	5	0	0	100%	0.9375
4NOG_PLP_A_501	100%	38%	0.042	0.992	1.24	1.18	3	1	0	0	100%	1
3WQC_PLP_B_402	100%	21%	0.045	0.993	1.96	1.38	4	4	0	0	100%	0.9375
4HT3_PLP_B_401	100%	15%	0.045	0.993	2.04	1.72	3	5	0	0	100%	0.9375

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.