PRD_000854

DB6 peptide

Created:2012-10-02
Last modified:  2013-06-03

PRD_000854 is described in the Biologically Interesting Molecule Reference Dictionary (BIRD).

The representative PDB ID is 3URL.

Chemical Details

Formal Charge0
Atom Count158
Chiral Atom Count10
Bond Count163
Aromatic Bond Count28
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Chemical Component Summary

NameDB6 peptide
Systematic Name (OpenEye OEToolkits)(2S)-1-[(2S,3R)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-azanyl-3-(1H-imidazol-3-ium-4-yl)propanoyl]amino]-3-oxidanyl-propanoyl]amino]-4-methyl-pentanoyl]amino]-3-phenyl-propanoyl]amino]-3-(1H-imidazol-3-ium-4-yl)propanoyl]amino]-3-phenyl-propyl]amino]-3-phenyl-propanoyl]amino]-3-oxidanyl-butanoyl]pyrrolidine-2-carboxylic acid
FormulaC57 H77 N13 O11
Molecular Weight1,120.302
TypePEPTIDE-LIKE

Chemical Descriptors

TypeProgramVersionDescriptor
SMILESACDLabs12.01O=C(NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(Cc1ccccc1)CNC(C(=O)NC(C(=O)N2C(C(=O)O)CCC2)C(O)C)Cc3ccccc3)Cc4[nH+]cnc4)Cc5ccccc5)CC(C)C)CO)C(N)Cc6[nH+]cnc6
SMILESCACTVS3.370CC(C)C[CH](NC(=O)[CH](CO)NC(=O)[CH](N)Cc1c[nH]c[nH+]1)C(=O)N[CH](Cc2ccccc2)C(=O)N[CH](Cc3c[nH]c[nH+]3)C(=O)N[CH](CN[CH](Cc4ccccc4)C(=O)N[CH]([CH](C)O)C(=O)N5CCC[CH]5C(O)=O)Cc6ccccc6
SMILESOpenEye OEToolkits1.7.6CC(C)CC(C(=O)NC(Cc1ccccc1)C(=O)NC(Cc2c[nH]c[nH+]2)C(=O)NC(Cc3ccccc3)CNC(Cc4ccccc4)C(=O)NC(C(C)O)C(=O)N5CCCC5C(=O)O)NC(=O)C(CO)NC(=O)C(Cc6c[nH]c[nH+]6)N
Canonical SMILESCACTVS3.370 CC(C)C[C@H](NC(=O)[C@H](CO)NC(=O)[C@@H](N)Cc1c[nH]c[nH+]1)C(=O)N[C@@H](Cc2ccccc2)C(=O)N[C@@H](Cc3c[nH]c[nH+]3)C(=O)N[C@H](CN[C@@H](Cc4ccccc4)C(=O)N[C@@H]([C@@H](C)O)C(=O)N5CCC[C@H]5C(O)=O)Cc6ccccc6
Canonical SMILESOpenEye OEToolkits1.7.6 C[C@H]([C@@H](C(=O)N1CCC[C@H]1C(=O)O)NC(=O)[C@H](Cc2ccccc2)NC[C@H](Cc3ccccc3)NC(=O)[C@H](Cc4c[nH]c[nH+]4)NC(=O)[C@H](Cc5ccccc5)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CO)NC(=O)[C@H](Cc6c[nH]c[nH+]6)N)O
InChIInChI1.03 InChI=1S/C57H75N13O11/c1-34(2)22-44(65-55(78)47(31-71)68-50(73)42(58)26-39-28-59-32-62-39)53(76)66-45(25-38-18-11-6-12-19-38)54(77)67-46(27-40-29-60-33-63-40)52(75)64-41(23-36-14-7-4-8-15-36)30-61-43(24-37-16-9-5-10-17-37)51(74)69-49(35(3)72)56(79)70-21-13-20-48(70)57(80)81/h4-12,14-19,28-29,32-35,41-49,61,71-72H,13,20-27,30-31,58H2,1-3H3,(H,59,62)(H,60,63)(H,64,75)(H,65,78)(H,66,76)(H,67,77)(H,68,73)(H,69,74)(H,80,81)/p+2
InChIKeyInChI1.03 VFAWUWUSVSPPEO-UHFFFAOYSA-P