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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: BIRD Name HAS EXACT PHRASE "=alpha-acarbose"

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Search Summary

This query matches 44 Structures.

Refinements

Structure Determination Methodology

experimental (44)

Scientific Name of Source Organism

	Homo sapiens (4)
	Aspergillus awamori (3)
	Streptococcus mutans (3)
	Bacteroides thetaiotaomicron (2)
	Blautia obeum ATCC 29174 (2)
	Pyrococcus woesei (2)
	uncultured bacterium (2)
	Actinoplanes sp. SE50/110 (1)
	Agathobacter rectalis DSM 17629 (1)
	Amorphotheca resinae (1)

More...

Taxonomy

	Bacteria (28)
	Eukaryota (13)
	Archaea (3)

Experimental Method

X-RAY DIFFRACTION (44)

Polymer Entity Type

Protein (44)

Refinement Resolution (Å)

	1.0 - 1.5 (2)
	1.5 - 2.0 (15)
	2.0 - 2.5 (14)
	2.5 - 3.0 (9)
	3.0 - 3.5 (3)
	3.5 - 4.0 (1)

Release Date

	1990 - 1994 (1)
	1995 - 1999 (3)
	2000 - 2004 (6)
	2005 - 2009 (4)
	2010 - 2014 (11)
	2015 - 2019 (8)
	2020 - 2024 (11)

Enzyme Classification Name

	Hydrolases (25)
	Transferases (13)
	Isomerases (1)

Symmetry Type

	Asymmetric (33)
	Cyclic (12)

SCOP Classification

	Alpha and beta proteins (a/b) (13)
	All beta proteins (8)
	All alpha proteins (6)
	Artifacts (2)

AllSelected

1 to 25 of 44 Structures

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1AGM \| pdb_00001agm	Download File View File

Refined structure for the complex of acarbose with glucoamylase from Aspergillus awamori var. x100 to 2.4 angstroms resolution

Aleshin, A.E., Firsov, L.M., Honzatko, R.B.

(1994) J Biological Chem 269: 15631-15639

Released	1994-09-30
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Aspergillus awamori
Macromolecule	GLUCOAMYLASE-471 (protein)
Unique Ligands	MAN
Unique branched monosaccharides	AC1, BMA, GLC, MAN, NAG

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1ESW \| pdb_00001esw	Download File View File

X-RAY STRUCTURE OF ACARBOSE BOUND TO AMYLOMALTASE FROM THERMUS AQUATICUS. IMPLICATIONS FOR THE SYNTHESIS OF LARGE CYCLIC GLUCANS

Przylas, I., Terada, Y., Fujii, K., Takaha, T., Saenger, W., Straeter, N.

(2000) Eur J Biochem 267: 6903-6913

Released	2001-04-11
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Thermus aquaticus
Macromolecule	AMYLOMALTASE (protein)
Unique Ligands	EDO
Unique branched monosaccharides	AC1, GLC

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1GAH \| pdb_00001gah	Download File View File

GLUCOAMYLASE-471 COMPLEXED WITH ACARBOSE

Aleshin, A.E., Stoffer, B., Firsov, L.M., Svensson, B., Honzatko, R.B.

(1996) Biochemistry 35: 8319-8328

Released	1996-08-17
Method	X-RAY DIFFRACTION 2 Å
Organisms	Aspergillus awamori
Macromolecule	GLUCOAMYLASE-471 (protein)
Unique Ligands	MAN
Unique branched monosaccharides	AC1, BMA, GLC, MAN, NAG

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1K1Y \| pdb_00001k1y	Download File View File

Crystal structure of thermococcus litoralis 4-alpha-glucanotransferase complexed with acarbose

Imamura, H., Fushinobu, S., Kumasaka, T., Yamamoto, M., Jeon, B.S., Wakagi, T., Matsuzawa, H.

(2003) J Biological Chem 278: 19378-19386

Released	2003-06-17
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Thermococcus litoralis
Macromolecule	4-ALPHA-GLUCANOTRANSFERASE (protein)
Unique Ligands	CA, TRS
Unique branched monosaccharides	AC1, GLC

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1KXH \| pdb_00001kxh	Download File View File

Crystal structure of the complex between an inactive mutant of psychrophilic alpha-amylase (D174N) and acarbose

Aghajari, N., Haser, R.

Biochemistry 41: 4273-4280

Released	2002-06-19
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Pseudoalteromonas haloplanktis
Macromolecule	alpha-amylase (protein)
Unique Ligands	CA, CL
Unique branched monosaccharides	AC1, GLC

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1LF9 \| pdb_00001lf9	Download File View File

CRYSTAL STRUCTURE OF BACTERIAL GLUCOAMYLASE COMPLEXED WITH ACARBOSE

Aleshin, A.E., Feng, P.-H., Honzatko, R.B., Reilly, P.J.

(2003) J Mol Biology 327: 61-73

Released	2003-02-25
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Thermoanaerobacterium thermosaccharolyticum
Macromolecule	GLUCOAMYLASE (protein)
Unique Ligands	SO4
Unique branched monosaccharides	AC1, GLC

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1MXD \| pdb_00001mxd	Download File View File

Structure of a (Ca,Zn)-dependent alpha-amylase from the hyperthermophilic archaeon Pyrococcus woesei

Linden, A., Mayans, O., Meyer-Klaucke, W., Antranikian, G., Wilmanns, M.

(2003) J Biological Chem 278: 9875-9884

Released	2003-06-10
Method	X-RAY DIFFRACTION 2 Å
Organisms	Pyrococcus woesei
Macromolecule	alpha amylase (protein)
Unique Ligands	ACT, CA, GLC, ZN
Unique branched monosaccharides	AC1, GLC

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1MXG \| pdb_00001mxg	Download File View File

Crystal Structure of a (Ca,Zn)-dependent alpha-amylase from the hyperthermophilic archaeon Pyrococcus woesei in complex with acarbose

Linden, A., Mayans, O., Meyer-Klaucke, W., Antranikian, G., Wilmanns, M.

(2003) J Biological Chem 278: 9875-9884

Released	2003-06-10
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Pyrococcus woesei
Macromolecule	alpha amylase (protein)
Unique Ligands	CA, EOH, ETE, MG, TRS, ZN
Unique branched monosaccharides	AC1, GLC

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2ECP \| pdb_00002ecp	Download File View File

THE CRYSTAL STRUCTURE OF THE E. COLI MALTODEXTRIN PHOSPHORYLASE COMPLEX

O'Reilly, M., Watson, K.A., Johnson, L.N.

(1999) Biochemistry 38: 5337-5345

Released	1999-06-15
Method	X-RAY DIFFRACTION 2.95 Å
Organisms	Escherichia coli
Macromolecule	MALTODEXTRIN PHOSPHORYLASE (protein)
Unique Ligands	GOL, PLP
Unique branched monosaccharides	AC1, GLC

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2F6D \| pdb_00002f6d	Download File View File

Structure of the complex of a glucoamylase from Saccharomycopsis fibuligera with acarbose

Sevcik, J., Hostinova, E., Solovicova, A., Gasperik, J., Dauter, Z., Wilson, K.S.

(2006) FEBS J 273: 2161-2171

Released	2006-05-23
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Saccharomycopsis fibuligera
Macromolecule	Glucoamylase GLU1 (protein)
Unique Ligands	NA, PO4
Unique branched monosaccharides	AC1, GLC

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2QMJ \| pdb_00002qmj	Download File View File

Crystral Structure of the N-terminal Subunit of Human Maltase-Glucoamylase in Complex with Acarbose

Sim, L., Rose, D.R.

(2008) J Mol Biology 375: 782-792

Released	2008-01-08
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	Maltase-glucoamylase, intestinal (protein)
Unique Ligands	GOL, NAG, SO4
Unique branched monosaccharides	AC1, GLC, NAG

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2ZQ0 \| pdb_00002zq0	Download File View File

Crystal structure of SusB complexed with acarbose

Yao, M., Tanaka, I., Kitamura, M.

(2008) J Biological Chem 283: 36328-36337

Released	2008-10-28
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Bacteroides thetaiotaomicron
Macromolecule	Alpha-glucosidase (Alpha-glucosidase SusB) (protein)
Unique Ligands	CA
Unique branched monosaccharides	AC1, GLC

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3AIC \| pdb_00003aic	Download File View File

Crystal Structure of Glucansucrase from Streptococcus mutans

Ito, K., Ito, S., Shimamura, T., Iwata, S.

(2011) J Mol Biology 408: 177-186

Released	2011-03-23
Method	X-RAY DIFFRACTION 3.11 Å
Organisms	Streptococcus mutans
Macromolecule	Glucosyltransferase-SI (protein)
Unique Ligands	CA, MES
Unique branched monosaccharides	AC1, GLC

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3BC9 \| pdb_00003bc9	Download File View File

Alpha-amylase B in complex with acarbose

Tan, T.-C., Mijts, B.N., Swaminathan, K., Patel, B.K.C., Divne, C.

(2008) J Mol Biology 378: 850-868

Released	2008-04-22
Method	X-RAY DIFFRACTION 1.35 Å
Organisms	Halothermothrix orenii H 168
Macromolecule	Alpha amylase, catalytic region (protein)
Unique Ligands	ACI, CA, GLC, NA
Unique branched monosaccharides	AC1, BGC, G6D, GLC, GLD

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3JYR \| pdb_00003jyr	Download File View File

Crystal structures of the GacH receptor of Streptomyces glaucescens GLA.O in the unliganded form and in complex with acarbose and an acarbose homolog. Comparison with acarbose-loaded maltose binding protein of Salmonella typhimurium.

Vahedi-Faridi, A., Licht, A., Bulut, H., Schneider, E.

(2010) J Mol Biology 397: 709-723

Released	2010-02-16
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	Maltose-binding periplasmic protein (protein)
Unique branched monosaccharides	AC1, GLC

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3JZJ \| pdb_00003jzj	Download File View File

Crystal structures of the GacH receptor of Streptomyces glaucescens GLA.O in the unliganded form and in complex with acarbose and an acarbose homolog. Comparison with acarbose-loaded maltose binding protein of Salmonella typhimurium.

Vahedi-Faridi, A., Licht, A., Bulut, H., Schneider, E.

(2010) J Mol Biology 397: 709-723

Released	2010-02-16
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Streptomyces glaucescens
Macromolecule	Acarbose/maltose binding protein GacH (protein)
Unique Ligands	SO4
Unique branched monosaccharides	AC1, GLC

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3K8M \| pdb_00003k8m	Download File View File

Crystal structure of SusG with acarbose

Koropatkin, N.M., Smith, T.J.

(2010) Structure 18: 200-215

Released	2010-03-02
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Bacteroides thetaiotaomicron
Macromolecule	Alpha-amylase, susG (protein)
Unique Ligands	CA, EDO
Unique branched monosaccharides	AC1, GLC

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3PHA \| pdb_00003pha	Download File View File

The crystal structure of the W169Y mutant of alpha-glucosidase (gh31 family) from Ruminococcus obeum atcc 29174 in complex with acarbose

Tan, K., Tesar, C., Keigher, L., Babnigg, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2010-11-24
Method	X-RAY DIFFRACTION 2.173 Å
Organisms	Blautia obeum ATCC 29174
Macromolecule	alpha-glucosidase (protein)
Unique branched monosaccharides	AC1, GLC

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3POC \| pdb_00003poc	Download File View File

The crystal structure of the D307A mutant of alpha-Glucosidase (FAMILY 31) from Ruminococcus obeum ATCC 29174 in complex with acarbose

Tan, K., Tesar, C., Wilton, R., Keigher, L., Babnigg, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2011-01-26
Method	X-RAY DIFFRACTION 1.99 Å
Organisms	Blautia obeum ATCC 29174
Macromolecule	alpha-Glucosidase (protein)
Unique Ligands	AC1, GLC, GOL
Unique branched monosaccharides	AC1, GLC

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3TOP \| pdb_00003top	Download File View File

Crystral Structure of the C-terminal Subunit of Human Maltase-Glucoamylase in Complex with Acarbose

Shen, Y., Qin, X.H., Ren, L.M.

(2011) Protein Cell 2: 827-836

Released	2011-11-23
Method	X-RAY DIFFRACTION 2.881 Å
Organisms	Homo sapiens
Macromolecule	Maltase-glucoamylase, intestinal (protein)
Unique branched monosaccharides	AC1, GLC

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3W37 \| pdb_00003w37	Download File View File

Sugar beet alpha-glucosidase with acarbose

Tagami, T., Yamashita, K., Okuyama, M., Mori, H., Yao, M., Kimura, A.

(2013) J Biological Chem 288: 19296-19303

Released	2013-05-29
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Beta vulgaris
Macromolecule	Alpha-glucosidase (protein)
Unique Ligands	ACY, GOL, NAG, SO4
Unique branched monosaccharides	AC1, FUC, GLC, NAG

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3ZOA \| pdb_00003zoa	Download File View File

The structure of Trehalose Synthase (TreS) of Mycobacterium smegmatis in complex with acarbose

Caner, S., Nguyen, N., Aguda, A., Zhang, R., Pan, Y.T., Withers, S.G., Brayer, G.D.

(2013) Glycobiology 23: 1075

Released	2013-07-17
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Mycolicibacterium smegmatis
Macromolecule	TREHALOSE SYNTHASE/AMYLASE TRES (protein)
Unique Ligands	CA, CL, MG
Unique branched monosaccharides	AC1, GLC

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4B9Z \| pdb_00004b9z	Download File View File

Crystal Structure of Agd31B, alpha-transglucosylase, complexed with Acarbose

Larsbrink, J., Izumi, A., Hemsworth, G.R., Davies, G.J., Brumer, H.

(2012) J Biological Chem 287: 43288

Released	2012-11-14
Method	X-RAY DIFFRACTION 2 Å
Organisms	Cellvibrio japonicus
Macromolecule	ALPHA-GLUCOSIDASE, PUTATIVE, ADG31B (protein)
Unique Ligands	EDO, OXL, PEG, SO4
Unique branched monosaccharides	AC1, GLC

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4UAC \| pdb_00004uac	Download File View File

EUR_01830 with acarbose

Koropatkin, N.M., Orlovsky, N.I.

(2015) Mol Microbiol 95: 209-230

Released	2014-12-10
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Agathobacter rectalis DSM 17629
Macromolecule	Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) (protein)
Unique Ligands	EDO, PEG
Unique branched monosaccharides	AC1, GLC

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5CLT \| pdb_00005clt	Download File View File

Crystal structure of human glycogen branching enzyme (GBE1) in complex with acarbose

Krojer, T., Froese, D.S., Goubin, S., Strain-Damerell, C., Mahajan, P., Burgess-Brown, N., von Delft, F., Bountra, C., Arrowsmith, C.H., Edwards, A., Yue, W., Structural Genomics Consortium (SGC)

To be published

Released	2015-08-12
Method	X-RAY DIFFRACTION 2.79 Å
Organisms	Homo sapiens
Macromolecule	1,4-alpha-glucan-branching enzyme (protein)
Unique branched monosaccharides	AC1, GLC

1 to 25 of 44 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1AGM | pdb_00001agm

1ESW | pdb_00001esw

1GAH | pdb_00001gah

1K1Y | pdb_00001k1y

1KXH | pdb_00001kxh

1LF9 | pdb_00001lf9

1MXD | pdb_00001mxd

1MXG | pdb_00001mxg

2ECP | pdb_00002ecp

2F6D | pdb_00002f6d

2QMJ | pdb_00002qmj

2ZQ0 | pdb_00002zq0

3AIC | pdb_00003aic

3BC9 | pdb_00003bc9

3JYR | pdb_00003jyr

3JZJ | pdb_00003jzj

3K8M | pdb_00003k8m

3PHA | pdb_00003pha

3POC | pdb_00003poc

3TOP | pdb_00003top

3W37 | pdb_00003w37

3ZOA | pdb_00003zoa

4B9Z | pdb_00004b9z

4UAC | pdb_00004uac

5CLT | pdb_00005clt