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234,440 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Source Organism Taxonomy Name (Full Lineage) = "Cutibacterium acnes"

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This query matches 24 Structures.

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Structure Determination Methodology

experimental (24)

Scientific Name of Source Organism

	Cutibacterium acnes (16)
	Cutibacterium acnes HL110PA4 (3)
	Escherichia coli (3)
	Cutibacterium acnes HL110PA3 (2)
	Cutibacterium acnes HL043PA1 (1)
	Cutibacterium acnes KPA171202 (1)
	Cutibacterium acnes SK137 (1)

Taxonomy

Bacteria (24)

Experimental Method

	X-RAY DIFFRACTION (17)
	ELECTRON MICROSCOPY (5)
	SOLUTION NMR (2)

Polymer Entity Type

	Protein (24)
	RNA (5)

Refinement Resolution (Å)

	1.5 - 2.0 (7)
	2.0 - 2.5 (10)
	2.5 - 3.0 (5)

Release Date

	2005 - 2009 (6)
	2015 - 2019 (2)
	2020 - 2024 (15)
	2025 - 2029 (1)

Enzyme Classification Name

	Lyases (4)
	Hydrolases (2)
	Transferases (1)

Symmetry Type

	Asymmetric (18)
	Cyclic (5)
	Tetrahedral (1)

SCOP Classification

	Alpha and beta proteins (a/b) (2)
	Artifacts (1)

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1 to 24 of 24 Structures

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2B9W \| pdb_00002b9w	Download File View File

Crystal Structure of CLA-producing fatty acid isomerase from P. acnes

Rudolph, M.G., Liavonchanka, A.

(2006) Proc Natl Acad Sci U S A 103: 2576-2581

Released	2006-01-31
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Cutibacterium acnes
Macromolecule	putative aminooxidase (protein)
Unique Ligands	12P, FAD, NA, SO4

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2B9X \| pdb_00002b9x	Download File View File

Crystal Structure of CLA-producing fatty acid isomerase from P. acnes

Rudolph, M.G., Liavonchanka, A.

(2006) Proc Natl Acad Sci U S A 103: 2576-2581

Released	2006-01-31
Method	X-RAY DIFFRACTION 2.22 Å
Organisms	Cutibacterium acnes
Macromolecule	putative aminooxidase (protein)
Unique Ligands	12P, FAD, IOD, NA, SO4

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2B9Y \| pdb_00002b9y	Download File View File

Crystal structure of CLA-producing fatty acid isomerase from P. acnes

Rudolph, M.G., Liavonchanka, A.

(2006) Proc Natl Acad Sci U S A 103: 2576-2581

Released	2006-01-31
Method	X-RAY DIFFRACTION 2.21 Å
Organisms	Cutibacterium acnes
Macromolecule	putative aminooxidase (protein)
Unique Ligands	BU1, CL, FAD, SO4

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2BA9 \| pdb_00002ba9	Download File View File

Crystal structure of CLA-producing fatty acid isomerase from P. acnes

Rudoplh, M.G., Liavonchanka, A.

(2006) Proc Natl Acad Sci U S A 103: 2576-2581

Released	2006-01-31
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Cutibacterium acnes
Macromolecule	putative aminooxidase (protein)
Unique Ligands	12P, FAD, NA

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2BAB \| pdb_00002bab	Download File View File

Crystal structure of CLA-producing fatty acid isomerase from P. acnes

Rudolph, M.G., Liavonchanka, A.

(2006) Proc Natl Acad Sci U S A 103: 2576-2581

Released	2006-01-31
Method	X-RAY DIFFRACTION 2 Å
Organisms	Cutibacterium acnes
Macromolecule	putative aminooxidase (protein)
Unique Ligands	BU1, FAD, ODD, SO4

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2BAC \| pdb_00002bac	Download File View File

Crystal structure of CLA-producing fatty acid isomerase from P. acnes

Rudolph, M.G., Liavonchanka, A.

(2006) Proc Natl Acad Sci U S A 103: 2576-2581

Released	2006-01-31
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Cutibacterium acnes
Macromolecule	putative aminooxidase (protein)
Unique Ligands	FAD, ODT, SO4

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6A9N \| pdb_00006a9n	Download File View File

Crystal structure of KAS III from Propionibacterium acnes

Lee, W.C., Cheon, D., Kim, Y.

To be published

Released	2019-07-17
Method	X-RAY DIFFRACTION 2.099 Å
Organisms	Cutibacterium acnes
Macromolecule	3-oxoacyl-[acyl-carrier-protein] synthase 3 (protein)
Unique Ligands	GOL, K

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6GVB \| pdb_00006gvb	Download File View File

Crystal structure of Cutibacterium acnes exo-beta-1,4-mannosidase

Reichenbach, T., Divne, C.

(2018) PLoS One 13: e0204703-e0204703

Released	2019-07-03
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Cutibacterium acnes
Macromolecule	exo-beta-1,4-mannosidase (protein)
Unique Ligands	MPO

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6KHK \| pdb_00006khk	Download File View File

Lipase (Closed form)

Kim, H.J., Kwon, A.R.

To be published

Released	2020-07-22
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Cutibacterium acnes HL110PA4
Macromolecule	Hydrolase, alpha/beta domain protein (protein)
Unique Ligands	GOL

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6KHL \| pdb_00006khl	Download File View File

Lipase (Blocked form)

Kim, H.J., Kwon, A.R.

To be published

Released	2020-07-22
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Cutibacterium acnes HL110PA4
Macromolecule	Hydrolase, alpha/beta domain protein (protein)
Unique Ligands	DK0, GOL, PEG

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6KHM \| pdb_00006khm	Download File View File

Lipase (Open form)

Kim, H.J., Kwon, A.R.

To be published

Released	2020-07-22
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Cutibacterium acnes HL110PA4
Macromolecule	Hydrolase, alpha/beta domain protein (protein)
Unique Ligands	DK6, DK9, DKF, DKL, DKO

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6SME \| pdb_00006sme	Download File View File

THE CRYSTAL STRUCTURE OF TYPE II DEHYDROQUINASE FROM PROPIONIBACTERIUM ACNES

Lapthorn, A.J., Roszak, A.W.

(2020) Nanoscale Horiz

Released	2020-07-08
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Cutibacterium acnes
Macromolecule	3-dehydroquinate dehydratase (protein)
Unique Ligands	GOL, SO4

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7BCJ \| pdb_00007bcj	Download File View File

Solution Structure of RoxP

Stoedkilde, K., Nielsen, J.T., Mulder, F.A.A., Andersen, C.B.F.

(2022) Front Cell Infect Microbiol 12: 803004-803004

Released	2021-11-24
Method	SOLUTION NMR
Organisms	Cutibacterium acnes KPA171202
Macromolecule	Radical Oxygenase of Propionibacterium acnes (protein)

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7LBU \| pdb_00007lbu	Download File View File

Crystal structure of the Propionibacterium acnes surface sialidase

Yu, A.C.Y., Volkers, G., Strynadka, N.C.J.

(2022) Glycobiology 32: 162-170

Released	2021-12-08
Method	X-RAY DIFFRACTION 2.11 Å
Organisms	Cutibacterium acnes
Macromolecule	Exo-alpha-sialidase (protein)
Unique Ligands	ACT, PO4

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7LBV \| pdb_00007lbv	Download File View File

Crystal structure of the Propionibacterium acnes surface sialidase in complex with Neu5Ac2en

Yu, A.C.Y., Volkers, G., Strynadka, N.C.J.

(2022) Glycobiology 32: 162-170

Released	2021-12-08
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Cutibacterium acnes
Macromolecule	Exo-alpha-sialidase (protein)
Unique Ligands	DAN, PO4

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8CRX \| pdb_00008crx	Download File View File

Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound

Lomakin, I.B., Devarkar, S.C., Bunick, C.G.

(2023) Nucleic Acids Res 51: 2915-2930

Released	2023-03-22
Method	ELECTRON MICROSCOPY 2.78 Å
Organisms	Cutibacterium acnes Escherichia coli
Macromolecule	Unique protein chains: 49 Unique nucleic acid chains: 5
Unique Ligands	MG, V7A, ZN

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8CVM \| pdb_00008cvm	Download File View File

Cutibacterium acnes 50S ribosomal subunit with P-site tRNA and Sarecycline bound in the local refined map

Lomakin, I.B., Devarkar, S.C., Bunick, C.G.

(2023) Nucleic Acids Res 51: 2915-2930

Released	2023-03-15
Method	ELECTRON MICROSCOPY 2.66 Å
Organisms	Cutibacterium acnes Escherichia coli
Macromolecule	Unique protein chains: 29 Unique nucleic acid chains: 3
Unique Ligands	MG, V7A, ZN

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8CVO \| pdb_00008cvo	Download File View File

Cutibacterium acnes 30S ribosomal subunit with Sarecycline bound, head domain only in the local refined map

Lomakin, I.B., Devarkar, S.C., Bunick, C.G.

(2023) Nucleic Acids Res 51: 2915-2930

Released	2023-03-15
Method	ELECTRON MICROSCOPY 2.95 Å
Organisms	Cutibacterium acnes
Macromolecule	Unique protein chains: 8 Unique nucleic acid chains: 1
Unique Ligands	MG, V7A, ZN

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8CWO \| pdb_00008cwo	Download File View File

Cutibacterium acnes 30S ribosomal subunit with Sarecycline bound, body domain only in the local refined map

Lomakin, I.B., Devarkar, S.C., Bunick, C.G.

(2023) Nucleic Acids Res 51: 2915-2930

Released	2023-03-15
Method	ELECTRON MICROSCOPY 2.84 Å
Organisms	Cutibacterium acnes Escherichia coli
Macromolecule	Unique protein chains: 13 Unique nucleic acid chains: 2
Unique Ligands	MG

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8FNX \| pdb_00008fnx	Download File View File

Crystal structure of Hyaluronate lyase B from Cutibacterium acnes

Katiki, M., McNally, R., Chatterjee, A., Hajam, I.A., Liu, G.Y., Murali, R.

(2023) Nat Commun 14: 8061-8061

Released	2023-12-13
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Cutibacterium acnes HL110PA3
Macromolecule	Hyaluronate lyase (protein)
Unique Ligands	GOL, PO4

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8FYG \| pdb_00008fyg	Download File View File

Crystal structure of Hyaluronate lyase A from Cutibacterium acnes

Katiki, M., McNally, R., Chatterjee, A., Hajam, I.A., Liu, G.Y., Murali, R.

(2023) Nat Commun 14: 8061-8061

Released	2023-12-13
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Cutibacterium acnes HL043PA1
Macromolecule	Hyaluronate lyase (protein)
Unique Ligands	EDO, GOL

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8G0O \| pdb_00008g0o	Download File View File

Crystal structure of Y281F mutant of Hyaluronate lyase B from Cutibacterium acnes

Katiki, M., McNally, R., Chatterjee, A., Hajam, I.A., Liu, G.Y., Murali, R.

(2023) Nat Commun 14: 8061-8061

Released	2023-12-13
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Cutibacterium acnes HL110PA3
Macromolecule	Hyaluronate lyase (protein)

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8YG0 \| pdb_00008yg0	Download File View File

Structural insights into Cutibacterium acnes acyl carrier protein

Oh, S., Jang, A., Cheon, D., Kim, Y.

To be published

Released	2025-03-05
Method	SOLUTION NMR
Organisms	Cutibacterium acnes SK137
Macromolecule	Acyl carrier protein (protein)

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9C4G \| pdb_00009c4g	Download File View File

Cutibacterium acnes 50S ribosomal subunit with Clindamycin bound

Lomakin, I.B., Devarkar, S.C., Bunick, C.G.

(2024) J Invest Dermatol 144: 2553-2561.e3

Released	2024-08-21
Method	ELECTRON MICROSCOPY 2.53 Å
Organisms	Cutibacterium acnes
Macromolecule	Unique protein chains: 29 Unique nucleic acid chains: 2
Unique Ligands	CLY, MG, ZN

1 to 24 of 24 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

2B9W | pdb_00002b9w

2B9X | pdb_00002b9x

2B9Y | pdb_00002b9y

2BA9 | pdb_00002ba9

2BAB | pdb_00002bab

2BAC | pdb_00002bac

6A9N | pdb_00006a9n

6GVB | pdb_00006gvb

6KHK | pdb_00006khk

6KHL | pdb_00006khl

6KHM | pdb_00006khm

6SME | pdb_00006sme

7BCJ | pdb_00007bcj

7LBU | pdb_00007lbu

7LBV | pdb_00007lbv

8CRX | pdb_00008crx

8CVM | pdb_00008cvm

8CVO | pdb_00008cvo

8CWO | pdb_00008cwo

8FNX | pdb_00008fnx

8FYG | pdb_00008fyg

8G0O | pdb_00008g0o

8YG0 | pdb_00008yg0

9C4G | pdb_00009c4g