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235,183 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Source Organism Taxonomy Name (Full Lineage) = "Rous sarcoma virus"

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Search Summary

This query matches 96 Structures.

Refinements

Structure Determination Methodology

experimental (96)

Scientific Name of Source Organism

	Rous sarcoma virus - Prague C (56)
	Rous sarcoma virus (20)
	Rous sarcoma virus (strain Schmidt-Ruppin) (13)
	Rous sarcoma virus (strain Schmidt-Ruppin A) (5)
	Rous sarcoma virus (strain Schmidt-Ruppin E) (2)
	Alphapolyomavirus mauratus (1)
	Gallus gallus (1)
	Homo sapiens (1)
	Rous sarcoma virus - Schmidt-Ruppin B (1)
	unidentified (1)

Taxonomy

	Riboviria (96)
	Eukaryota (2)
	Monodnaviria (1)
	unclassified sequences (1)

Experimental Method

	X-RAY DIFFRACTION (51)
	ELECTRON MICROSCOPY (35)
	SOLUTION NMR (10)

Polymer Entity Type

	Protein (92)
	DNA (5)
	RNA (5)

Refinement Resolution (Å)

	0.5 - 1.0 (1)
	1.5 - 2.0 (16)
	2.0 - 2.5 (21)
	2.5 - 3.0 (9)
	3.0 - 3.5 (8)
	3.5 - 4.0 (1)
	4.0 - 4.5 (3)
	> 4.5 (27)

Release Date

	1985 - 1989 (1)
	1990 - 1994 (4)
	1995 - 1999 (18)
	2000 - 2004 (9)
	2005 - 2009 (9)
	2010 - 2014 (7)
	2015 - 2019 (12)
	2020 - 2024 (32)
	2025 - 2029 (4)

Enzyme Classification Name

	Transferases (27)
	Hydrolases (12)

Membrane Protein Annotation

OPM (1)

Symmetry Type

	Cyclic (57)
	Asymmetric (33)
	Icosahedral (3)
	Dihedral (2)

SCOP Classification

	All alpha proteins (20)
	Alpha and beta proteins (a/b) (18)
	Alpha and beta proteins (a+b) (12)
	All beta proteins (6)
	Artifacts (4)

AllSelected

1 to 25 of 96 Structures

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1A5V \| pdb_00001a5v	Download File View File

ASV INTEGRASE CORE DOMAIN WITH HIV-1 INTEGRASE INHIBITOR Y3 AND MN CATION

Lubkowski, J., Yang, F., Alexandratos, J., Wlodawer, A.

(1998) Proc Natl Acad Sci U S A 95: 4831-4836

Released	1998-05-27
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Rous sarcoma virus (strain Schmidt-Ruppin)
Macromolecule	INTEGRASE (protein)
Unique Ligands	MN, Y3

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1A5W \| pdb_00001a5w	Download File View File

ASV INTEGRASE CORE DOMAIN WITH HIV-1 INTEGRASE INHIBITOR Y3

Lubkowski, J., Yang, F., Alexandratos, J., Wlodawer, A.

(1998) Proc Natl Acad Sci U S A 95: 4831-4836

Released	1998-05-27
Method	X-RAY DIFFRACTION 2 Å
Organisms	Rous sarcoma virus (strain Schmidt-Ruppin)
Macromolecule	INTEGRASE (protein)
Unique Ligands	Y3

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1A5X \| pdb_00001a5x	Download File View File

ASV INTEGRASE CORE DOMAIN WITH HIV-1 INTEGRASE INHIBITOR Y3

Lubkowski, J., Yang, F., Alexandratos, J., Wlodawer, A.

(1998) Proc Natl Acad Sci U S A 95: 4831-4836

Released	1998-05-27
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Rous sarcoma virus (strain Schmidt-Ruppin)
Macromolecule	INTEGRASE (protein)
Unique Ligands	Y3

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1A6S \| pdb_00001a6s	Download File View File

M-DOMAIN FROM GAG POLYPROTEIN OF ROUS SARCOMA VIRUS, NMR, 20 STRUCTURES

Mcdonnell, J.M., Fushman, D., Cahill, S.M., Zhou, W., Wolven, A., Wilson, C.B., Nelle, T.D., Resh, M.D., Wills, J., Cowburn, D.

(1998) J Mol Biology 279: 921-928

Released	1998-10-14
Method	SOLUTION NMR
Organisms	Rous sarcoma virus - Prague C
Macromolecule	GAG POLYPROTEIN (protein)

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1BAI \| pdb_00001bai	Download File View File

Crystal structure of Rous sarcoma virus protease in complex with inhibitor

Wu, J., Adomat, J.M., Ridky, T.W., Louis, J.M., Leis, J., Harrison, R.W., Weber, I.T.

(1998) Biochemistry 37: 4518-4526

Released	1999-01-13
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Rous sarcoma virus
Macromolecule	PROTEASE (protein)
Unique Ligands	0Q4

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1BKL \| pdb_00001bkl	Download File View File

SELF-ASSOCIATED APO SRC SH2 DOMAIN

Holland, D.R., Rubin, J.R.

To be published

Released	1997-07-23
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Rous sarcoma virus
Macromolecule	PP60 V-SRC TYROSINE KINASE TRANSFORMING PROTEIN (protein)

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1BKM \| pdb_00001bkm	Download File View File

COCRYSTAL STRUCTURE OF D-AMINO ACID SUBSTITUTED PHOSPHOPEPTIDE COMPLEX

Holland, D.R., Rubin, J.R.

(1997) J Am Chem Soc 119: 12471

Released	1997-07-07
Method	X-RAY DIFFRACTION 2 Å
Organisms	Rous sarcoma virus
Macromolecule	PP60 V-SRC TYROSINE KINASE TRANSFORMING PROTEIN (protein)
Unique Ligands	1C5

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1C0M \| pdb_00001c0m	Download File View File

CRYSTAL STRUCTURE OF RSV TWO-DOMAIN INTEGRASE

Yang, Z.-N., Mueser, T.C., Bushman, F.D., Hyde, C.C.

(2000) J Mol Biology 296: 535-548

Released	2000-03-01
Method	X-RAY DIFFRACTION 2.53 Å
Organisms	Rous sarcoma virus
Macromolecule	PROTEIN (INTEGRASE) (protein)

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1C1A \| pdb_00001c1a	Download File View File

CRYSTAL STRUCTURE OF RSV TWO-DOMAIN INTEGRASE

Yang, Z.-N., Mueser, T.C., Bushman, F.D., Hyde, C.C.

(2000) J Mol Biology 296: 535-548

Released	2000-03-01
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Rous sarcoma virus
Macromolecule	RSV INTEGRASE (protein)

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1D1D \| pdb_00001d1d	Download File View File

NMR SOLUTION STRUCTURE OF THE CAPSID PROTEIN FROM ROUS SARCOMA VIRUS

Campos-Olivas, R., Newman, J.L., Summers, M.F.

(2000) J Mol Biology 296: 633-649

Released	1999-12-10
Method	SOLUTION NMR
Organisms	Rous sarcoma virus
Macromolecule	PROTEIN (CAPSID PROTEIN) (protein)

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1EM9 \| pdb_00001em9	Download File View File

ROUS SARCOMA VIRUS CAPSID PROTEIN: N-TERMINAL DOMAIN

Kingston, R.L., Fitzon-Ostendorp, T., Eisenmesser, E.Z., Schatz, G.W., Vogt, V.M., Post, C.B., Rossmann, M.G.

(2000) Structure 8: 617-628

Released	2000-08-02
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Rous sarcoma virus - Prague C
Macromolecule	GAG POLYPROTEIN CAPSID PROTEIN P27 (protein)
Unique Ligands	MG

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1EOQ \| pdb_00001eoq	Download File View File

ROUS SARCOMA VIRUS CAPSID PROTEIN: C-TERMINAL DOMAIN

Kingston, R.L., Fitzon-Ostendorp, T., Eisenmesser, E.Z., Schatz, G.W., Vogt, V.M., Post, C.B., Rossmann, M.G.

(2000) Structure 8: 617-628

Released	2000-08-02
Method	SOLUTION NMR
Organisms	Rous sarcoma virus - Prague C
Macromolecule	GAG POLYPROTEIN CAPSID PROTEIN P27 (protein)

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1IS0 \| pdb_00001is0	Download File View File

Crystal Structure of a Complex of the Src SH2 Domain with Conformationally Constrained Peptide Inhibitor

Davidson, J.P., Lubman, O., Rose, T., Waksman, G., Martin, S.F.

(2002) J Am Chem Soc 124: 205-215

Released	2002-02-06
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Rous sarcoma virus
Macromolecule	AY0 GLU GLU ILE peptide (protein) Tyrosine-protein kinase transforming protein SRC (protein)

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1KC2 \| pdb_00001kc2	Download File View File

structure of the triple (Lys(beta)D3Ala, Asp(beta)C8Ala, AspCD2Ala) mutant of the Src SH2 domain bound to the PQpYEEIPI peptide

Lubman, O.Y., Waksman, G.

(2002) J Mol Biology 316: 291-304

Released	2002-04-17
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Rous sarcoma virus
Macromolecule	PQpYEEIPI peptide (protein) Src Tyrosine kinase (protein)
Unique Ligands	CO

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1NZL \| pdb_00001nzl	Download File View File

Crystal Structure of Src SH2 domain bound to doubly phosphorylated peptide PQpYEpYIPI

Lubman, O.Y., Waksman, G.

(2003) J Mol Biology 328: 655-668

Released	2003-04-22
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Rous sarcoma virus (strain Schmidt-Ruppin)
Macromolecule	Doubly phosphorylated peptide ligand (PQpYEpYIPI) (protein) Tyrosine-protein kinase transforming protein SRC (protein)
Unique Ligands	CL, PG4

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1NZV \| pdb_00001nzv	Download File View File

Crystal Structure of Src SH2 domain bound to doubly phosphorylated peptide PQpYIpYVPA

Lubman, O.Y., Waksman, G.

(2003) J Mol Biology 328: 655-668

Released	2003-04-22
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Rous sarcoma virus (strain Schmidt-Ruppin)
Macromolecule	Doubly phosphorylated peptide PQpYIpYVPA (protein) Tyrosine-protein kinase transforming protein SRC (protein)
Unique Ligands	CL, PG4

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1P7N \| pdb_00001p7n	Download File View File

Dimeric Rous Sarcoma virus Capsid protein structure with an upstream 25-amino acid residue extension of C-terminal of Gag p10 protein

Nandhagopal, N., Simpson, A.A., Johnson, M.C., Francisco, A.B., Schatz, G.W., Rossmann, M.G., Vogt, V.M.

(2004) J Mol Biology 335: 275-282

Released	2003-12-23
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Rous sarcoma virus
Macromolecule	GAG POLYPROTEIN CAPSID PROTEIN P27 (protein)

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1SHA \| pdb_00001sha	Download File View File

CRYSTAL STRUCTURE OF THE PHOSPHOTYROSINE RECOGNITION DOMAIN SH2 OF V-SRC COMPLEXED WITH TYROSINE-PHOSPHORYLATED PEPTIDES

Waksman, G., Kuriyan, J.

(1992) Nature 358: 646-653

Released	1993-10-31
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Rous sarcoma virus
Macromolecule	PHOSPHOPEPTIDE A (protein) V-SRC SH2 DOMAIN (protein)

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1SHB \| pdb_00001shb	Download File View File

CRYSTAL STRUCTURE OF THE PHOSPHOTYROSINE RECOGNITION DOMAIN SH2 OF V-SRC COMPLEXED WITH TYROSINE-PHOSPHORYLATED PEPTIDES

Waksman, G., Kuriyan, J.

(1992) Nature 358: 646-653

Released	1993-10-31
Method	X-RAY DIFFRACTION 2 Å
Organisms	Rous sarcoma virus
Macromolecule	PHOSPHOPEPTIDE B (protein) V-SRC SH2 DOMAIN (protein)

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1SKJ \| pdb_00001skj	Download File View File

COCRYSTAL STRUCTURE OF UREA-SUBSTITUTED PHOSPHOPEPTIDE COMPLEX

Holland, D.R., Rubin, J.R.

(1997) J Med Chem 40: 3719-3725

Released	1998-02-25
Method	X-RAY DIFFRACTION 2 Å
Organisms	Rous sarcoma virus
Macromolecule	PP60 V-SRC TYROSINE KINASE TRANSFORMING PROTEIN (protein)
Unique Ligands	UR2

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1SPR \| pdb_00001spr	Download File View File

BINDING OF A HIGH AFFINITY PHOSPHOTYROSYL PEPTIDE TO THE SRC SH2 DOMAIN: CRYSTAL STRUCTURES OF THE COMPLEXED AND PEPTIDE-FREE FORMS

Waksman, G., Kuriyan, J.

(1993) Cell 72: 779-790

Released	1994-05-31
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Rous sarcoma virus
Macromolecule	SRC TYROSINE KINASE SH2 DOMAIN (protein)
Unique Ligands	PO4

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1SPS \| pdb_00001sps	Download File View File

BINDING OF A HIGH AFFINITY PHOSPHOTYROSYL PEPTIDE TO THE SRC SH2 DOMAIN: CRYSTAL STRUCTURES OF THE COMPLEXED AND PEPTIDE-FREE FORMS

Waksman, G., Kuriyan, J.

(1993) Cell 72: 779-790

Released	1994-05-31
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Alphapolyomavirus mauratus Rous sarcoma virus
Macromolecule	PEPTIDE YEEI (protein) SRC SH2 DOMAIN (protein)

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1VSD \| pdb_00001vsd	Download File View File

ASV INTEGRASE CORE DOMAIN WITH MG(II) COFACTOR AND HEPES LIGAND, HIGH MG CONCENTRATION FORM

Bujacz, G., Jaskolski, M., Alexandratos, J., Wlodawer, A.

(1996) Structure 4: 89-96

Released	1996-04-03
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Rous sarcoma virus (strain Schmidt-Ruppin)
Macromolecule	INTEGRASE (protein)
Unique Ligands	EPE, MG

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1VSE \| pdb_00001vse	Download File View File

ASV INTEGRASE CORE DOMAIN WITH MG(II) COFACTOR AND HEPES LIGAND, LOW MG CONCENTRATION FORM

Bujacz, G., Jaskolski, M., Alexandratos, J., Wlodawer, A.

(1996) Structure 4: 89-96

Released	1996-04-03
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Rous sarcoma virus (strain Schmidt-Ruppin)
Macromolecule	INTEGRASE (protein)
Unique Ligands	EPE

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1VSF \| pdb_00001vsf	Download File View File

ASV INTEGRASE CORE DOMAIN WITH MN(II) COFACTOR AND HEPES LIGAND, HIGH MG CONCENTRATION FORM

Bujacz, G., Jaskolski, M., Alexandratos, J., Wlodawer, A.

(1996) Structure 4: 89-96

Released	1996-04-03
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Rous sarcoma virus (strain Schmidt-Ruppin)
Macromolecule	INTEGRASE (protein)
Unique Ligands	EPE, MN

1 to 25 of 96 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1A5V | pdb_00001a5v

1A5W | pdb_00001a5w

1A5X | pdb_00001a5x

1A6S | pdb_00001a6s

1BAI | pdb_00001bai

1BKL | pdb_00001bkl

1BKM | pdb_00001bkm

1C0M | pdb_00001c0m

1C1A | pdb_00001c1a

1D1D | pdb_00001d1d

1EM9 | pdb_00001em9

1EOQ | pdb_00001eoq

1IS0 | pdb_00001is0

1KC2 | pdb_00001kc2

1NZL | pdb_00001nzl

1NZV | pdb_00001nzv

1P7N | pdb_00001p7n

1SHA | pdb_00001sha

1SHB | pdb_00001shb

1SKJ | pdb_00001skj

1SPR | pdb_00001spr

1SPS | pdb_00001sps

1VSD | pdb_00001vsd

1VSE | pdb_00001vse

1VSF | pdb_00001vsf