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234,440 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Keywords HAS EXACT PHRASE "DIOXYGENASE"

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Search Summary

This query matches 20 Structures.

Refinements

Structure Determination Methodology

experimental (20)

Scientific Name of Source Organism

	Pseudomonas putida (16)
	Sphingomonas paucimobilis (2)
	Glycine max (1)
	Ovis aries (1)

Taxonomy

	Bacteria (18)
	Eukaryota (2)

Experimental Method

X-RAY DIFFRACTION (20)

Polymer Entity Type

Protein (20)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (2)
	2.0 - 2.5 (16)
	3.5 - 4.0 (1)

Release Date

	1990 - 1994 (1)
	1995 - 1999 (19)

Enzyme Classification Name

Oxidoreductases (20)

Membrane Protein Annotation

mpstruc (1)

Symmetry Type

	Tetrahedral (15)
	Cyclic (4)
	Asymmetric (2)

SCOP Classification

	All beta proteins (17)
	All alpha proteins (4)
	Alpha and beta proteins (a+b) (1)
	Alpha and beta proteins (a/b) (2)
	Small proteins (1)

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1 to 20 of 20 Structures

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1B4U \| pdb_00001b4u	Download File View File

PROTOCATECHUATE 4,5-DIOXYGENASE (LIGAB) IN COMPLEX WITH PROTOCATECHUATE (PCA)

Sugimoto, K., Senda, T., Mitsui, Y.

(1999) Structure 7: 953-965

Released	1999-08-27
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Sphingomonas paucimobilis
Macromolecule	PROTOCATECHUATE 4,5-DIOXYGENASE (protein)
Unique Ligands	DHB, FE

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1BOU \| pdb_00001bou	Download File View File

THREE-DIMENSIONAL STRUCTURE OF LIGAB

Sugimoto, K., Senda, T., Fukuda, M., Mitsui, Y.

(1999) Structure 7: 953-965

Released	1999-05-04
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Sphingomonas paucimobilis
Macromolecule	4,5-DIOXYGENASE ALPHA CHAIN (protein) 4,5-DIOXYGENASE BETA CHAIN (protein)
Unique Ligands	FE

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1YGE \| pdb_00001yge	Download File View File

LIPOXYGENASE-1 (SOYBEAN) AT 100K

Minor, W., Steczko, J., Stec, B., Otwinowski, Z., Bolin, J.T., Walter, R., Axelrod, B.

(1996) Biochemistry 35: 10687-10701

Released	1997-07-23
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Glycine max
Macromolecule	LIPOXYGENASE-1 (protein)
Unique Ligands	FE

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2PCD \| pdb_00002pcd	Download File View File

STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE FROM PSEUDOMONAS AERUGINOSA AT 2.15 ANGSTROMS RESOLUTION

Ohlendorf, D.H., Orville, A.M., Lipscomb, J.D.

(1994) J Mol Biology 244: 586-608

Released	1994-12-20
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Pseudomonas putida
Macromolecule	PROTOCATECHUATE 3,4-DIOXYGENASE (ALPHA CHAIN) (protein) PROTOCATECHUATE 3,4-DIOXYGENASE (BETA CHAIN) (protein)
Unique Ligands	FE

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3PCA \| pdb_00003pca	Download File View File

STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 3,4-DIHYDROXYBENZOATE

Orville, A.M., Lipscomb, J.D., Ohlendorf, D.H.

(1997) Biochemistry 36: 10052-10066

Released	1998-01-21
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Pseudomonas putida
Macromolecule	PROTOCATECHUATE 3,4-DIOXYGENASE (protein)
Unique Ligands	BME, DHB, FE

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3PCB \| pdb_00003pcb	Download File View File

STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 3-HYDROXYBENZOATE

Elango, N., Orville, A.M., Lipscomb, J.D., Ohlendorf, D.H.

(1997) Biochemistry 36: 10039-10051

Released	1998-04-29
Method	X-RAY DIFFRACTION 2.19 Å
Organisms	Pseudomonas putida
Macromolecule	Protocatechuate 3,4-dioxygenase alpha chain (protein) Protocatechuate 3,4-dioxygenase beta chain (protein)
Unique Ligands	3HB, FE

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3PCC \| pdb_00003pcc	Download File View File

STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 4-HYDROXYBENZOATE

Elango, N., Orville, A.M., Lipscomb, J.D., Ohlendorf, D.H.

(1997) Biochemistry 36: 10039-10051

Released	1998-04-29
Method	X-RAY DIFFRACTION 1.98 Å
Organisms	Pseudomonas putida
Macromolecule	PROTOCATECHUATE 3,4-DIOXYGENASE (protein)
Unique Ligands	BME, FE, PHB

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3PCD \| pdb_00003pcd	Download File View File

PROTOCATECHUATE 3,4-DIOXYGENASE Y447H MUTANT

Orville, A.M., Lipscomb, J.D., Ohlendorf, D.H.

(1998) Biochemistry 37: 2131-2144

Released	1998-05-27
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Pseudomonas putida
Macromolecule	PROTOCATECHUATE 3,4-DIOXYGENASE (protein)
Unique Ligands	BME, CO3, FE

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3PCE \| pdb_00003pce	Download File View File

STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 3-HYDROXYPHENYLACETATE

Elango, N., Orville, A.M., Lipscomb, J.D., Ohlendorf, D.H.

(1997) Biochemistry 36: 10039-10051

Released	1998-04-29
Method	X-RAY DIFFRACTION 2.06 Å
Organisms	Pseudomonas putida
Macromolecule	PROTOCATECHUATE 3,4-DIOXYGENASE (protein)
Unique Ligands	3HP, BME, FE

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3PCF \| pdb_00003pcf	Download File View File

STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 3-FLURO-4-HYDROXYBENZOATE

Orville, A.M., Elango, N., Lipscomb, J.D., Ohlendorf, D.H.

(1997) Biochemistry 36: 10039-10051

Released	1998-01-07
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Pseudomonas putida
Macromolecule	Protocatechuate 3,4-dioxygenase alpha chain (protein) Protocatechuate 3,4-dioxygenase beta chain (protein)
Unique Ligands	FE, FHB

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3PCG \| pdb_00003pcg	Download File View File

STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH THE INHIBITOR 4-HYDROXYPHENYLACETATE

Elango, N., Orville, A.M., Lipscomb, J.D., Ohlendorf, D.H.

(1997) Biochemistry 36: 10039-10051

Released	1998-04-29
Method	X-RAY DIFFRACTION 1.96 Å
Organisms	Pseudomonas putida
Macromolecule	PROTOCATECHUATE 3,4-DIOXYGENASE (protein)
Unique Ligands	4HP, BME, FE

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3PCH \| pdb_00003pch	Download File View File

STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 3-CHLORO-4-HYDROXYBENZOATE

Orville, A.M., Elango, N., Lipscomb, J.D., Ohlendorf, D.H.

(1997) Biochemistry 36: 10039-10051

Released	1998-01-07
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Pseudomonas putida
Macromolecule	Protocatechuate 3,4-dioxygenase alpha chain (protein) Protocatechuate 3,4-dioxygenase beta chain (protein)
Unique Ligands	CHB, FE

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3PCI \| pdb_00003pci	Download File View File

STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 3-IODO-4-HYDROXYBENZOATE

Orville, A.M., Elango, N., Lipscomb, J.D., Ohlendorf, D.H.

(1997) Biochemistry 36: 10039-10051

Released	1998-01-21
Method	X-RAY DIFFRACTION 2.21 Å
Organisms	Pseudomonas putida
Macromolecule	PROTOCATECHUATE 3,4-DIOXYGENASE (protein)
Unique Ligands	BME, FE, IHB

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3PCJ \| pdb_00003pcj	Download File View File

STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 2-HYDROXYISONICOTINIC ACID N-OXIDE

Orville, A.M., Lipscomb, J.D., Ohlendorf, D.H.

(1997) Biochemistry 36: 10052-10066

Released	1998-01-21
Method	X-RAY DIFFRACTION 2.13 Å
Organisms	Pseudomonas putida
Macromolecule	PROTOCATECHUATE 3,4-DIOXYGENASE (protein)
Unique Ligands	BME, FE, INO

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3PCK \| pdb_00003pck	Download File View File

STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 6-HYDROXYNICOTINIC ACID N-OXIDE

Orville, A.M., Lipscomb, J.D., Ohlendorf, D.H.

(1997) Biochemistry 36: 10052-10066

Released	1998-01-21
Method	X-RAY DIFFRACTION 2.13 Å
Organisms	Pseudomonas putida
Macromolecule	PROTOCATECHUATE 3,4-DIOXYGENASE (protein)
Unique Ligands	BME, FE, NNO

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3PCL \| pdb_00003pcl	Download File View File

STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 2-HYDROXYISONICOTINIC ACID N-OXIDE AND CYANIDE

Orville, A.M., Lipscomb, J.D., Ohlendorf, D.H.

(1997) Biochemistry 36: 10052-10066

Released	1998-01-21
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Pseudomonas putida
Macromolecule	PROTOCATECHUATE 3,4-DIOXYGENASE (protein)
Unique Ligands	CYN, FE, INO

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3PCM \| pdb_00003pcm	Download File View File

STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 6-HYDROXYNICOTINIC ACID N-OXIDE AND CYANIDE

Orville, A.M., Lipscomb, J.D., Ohlendorf, D.H.

(1997) Biochemistry 36: 10052-10066

Released	1998-01-21
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Pseudomonas putida
Macromolecule	PROTOCATECHUATE 3,4-DIOXYGENASE (protein)
Unique Ligands	CYN, FE, NNO

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3PCN \| pdb_00003pcn	Download File View File

STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 3,4-DIHYDROXYPHENYLACETATE

Orville, A.M., Lipscomb, J.D., Ohlendorf, D.H.

(1997) Biochemistry 36: 11504-11513

Released	1998-02-25
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Pseudomonas putida
Macromolecule	PROTOCATECHUATE 3,4-DIOXYGENASE (protein)
Unique Ligands	BME, DHY, FE

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1PRH \| pdb_00001prh	Download File View File

THE X-RAY CRYSTAL STRUCTURE OF THE MEMBRANE PROTEIN PROSTAGLANDIN H2 SYNTHASE-1

Picot, D., Loll, P.J., Garavito, R.M.

(1994) Nature 367: 243-249

Released	1995-03-31
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Ovis aries
Macromolecule	PROSTAGLANDIN H2 SYNTHASE-1 (protein)
Unique Ligands	HEM

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1NDO \| pdb_00001ndo	Download File View File

NAPHTHALENE 1,2-DIOXYGENASE

Ramaswamy, S., Kauppi, B., Carredano, E.

(1998) Structure 6: 571-586

Released	1999-03-23
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Pseudomonas putida
Macromolecule	NAPHTHALENE 1,2-DIOXYGENASE (protein)
Unique Ligands	FE, FES

1 to 20 of 20 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1B4U | pdb_00001b4u

PROTOCATECHUATE 4,5-DIOXYGENASE (LIGAB) IN COMPLEX WITH PROTOCATECHUATE (PCA)

1BOU | pdb_00001bou

THREE-DIMENSIONAL STRUCTURE OF LIGAB

1YGE | pdb_00001yge

LIPOXYGENASE-1 (SOYBEAN) AT 100K

2PCD | pdb_00002pcd

STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE FROM PSEUDOMONAS AERUGINOSA AT 2.15 ANGSTROMS RESOLUTION

3PCA | pdb_00003pca

STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 3,4-DIHYDROXYBENZOATE

3PCB | pdb_00003pcb

STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 3-HYDROXYBENZOATE

3PCC | pdb_00003pcc

STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 4-HYDROXYBENZOATE

3PCD | pdb_00003pcd

PROTOCATECHUATE 3,4-DIOXYGENASE Y447H MUTANT

3PCE | pdb_00003pce

STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 3-HYDROXYPHENYLACETATE

3PCF | pdb_00003pcf

STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 3-FLURO-4-HYDROXYBENZOATE

3PCG | pdb_00003pcg

STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH THE INHIBITOR 4-HYDROXYPHENYLACETATE

3PCH | pdb_00003pch

STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 3-CHLORO-4-HYDROXYBENZOATE

3PCI | pdb_00003pci

STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 3-IODO-4-HYDROXYBENZOATE

3PCJ | pdb_00003pcj

STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 2-HYDROXYISONICOTINIC ACID N-OXIDE

3PCK | pdb_00003pck

STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 6-HYDROXYNICOTINIC ACID N-OXIDE

3PCL | pdb_00003pcl

STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 2-HYDROXYISONICOTINIC ACID N-OXIDE AND CYANIDE

3PCM | pdb_00003pcm

STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 6-HYDROXYNICOTINIC ACID N-OXIDE AND CYANIDE

3PCN | pdb_00003pcn

STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 3,4-DIHYDROXYPHENYLACETATE

1PRH | pdb_00001prh

THE X-RAY CRYSTAL STRUCTURE OF THE MEMBRANE PROTEIN PROSTAGLANDIN H2 SYNTHASE-1

1NDO | pdb_00001ndo

NAPHTHALENE 1,2-DIOXYGENASE

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1B4U | pdb_00001b4u

1BOU | pdb_00001bou

1YGE | pdb_00001yge

2PCD | pdb_00002pcd

3PCA | pdb_00003pca

3PCB | pdb_00003pcb

3PCC | pdb_00003pcc

3PCD | pdb_00003pcd

3PCE | pdb_00003pce

3PCF | pdb_00003pcf

3PCG | pdb_00003pcg

3PCH | pdb_00003pch

3PCI | pdb_00003pci

3PCJ | pdb_00003pcj

3PCK | pdb_00003pck

3PCL | pdb_00003pcl

3PCM | pdb_00003pcm

3PCN | pdb_00003pcn

1PRH | pdb_00001prh

1NDO | pdb_00001ndo