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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Keywords HAS EXACT PHRASE "ISOMERASE(INTRAMOLECULAR OXIDOREDUCTASE)"

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Search Summary

This query matches 75 Structures.

Refinements

Structure Determination Methodology

experimental (75)

Scientific Name of Source Organism

	Arthrobacter sp. NRRL B3728 (17)
	Streptomyces rubiginosus (15)
	Actinoplanes missouriensis (13)
	Trypanosoma brucei brucei (12)
	Gallus gallus (6)
	Streptomyces olivochromogenes (5)
	Saccharomyces cerevisiae (2)
	Escherichia coli (1)
	Homo sapiens (1)
	Streptomyces albus (1)

More...

Taxonomy

	Bacteria (53)
	Eukaryota (22)

Experimental Method

X-RAY DIFFRACTION (75)

Polymer Entity Type

Protein (75)

Refinement Resolution (Å)

	1.5 - 2.0 (28)
	2.0 - 2.5 (24)
	2.5 - 3.0 (23)

Release Date

	1975 - 1979 (1)
	1985 - 1989 (1)
	1990 - 1994 (63)
	1995 - 1999 (10)

Enzyme Classification Name

	Isomerases (75)
	Lyases (8)

Symmetry Type

	Dihedral (52)
	Cyclic (20)
	Asymmetric (4)

SCOP Classification

Alpha and beta proteins (a/b) (74)

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1 to 25 of 75 Structures

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1AG1 \| pdb_00001ag1	Download File View File

MONOHYDROGEN PHOSPHATE BINDING TO TRYPANOSOMAL TRIOSEPHOSPHATE ISOMERASE

Verlinde, C.L.M.J., Hol, W.G.J.

(1991) Eur J Biochem 198: 53-57

Released	1997-06-16
Method	X-RAY DIFFRACTION 2.36 Å
Organisms	Trypanosoma brucei
Macromolecule	TRIOSEPHOSPHATE ISOMERASE (protein)
Unique Ligands	PO4

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1DID \| pdb_00001did	Download File View File

OBSERVATIONS OF REACTION INTERMEDIATES AND THE MECHANISM OF ALDOSE-KETOSE INTERCONVERSION BY D-XYLOSE ISOMERASE

Collyer, C.A., Goldberg, J.D., Blow, D.M.

(1990) Proc Natl Acad Sci U S A 87: 1362-1366

Released	1993-07-15
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Arthrobacter sp. NRRL B3728
Macromolecule	D-XYLOSE ISOMERASE (protein)
Unique Ligands	DIG, MN

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1DIE \| pdb_00001die	Download File View File

OBSERVATIONS OF REACTION INTERMEDIATES AND THE MECHANISM OF ALDOSE-KETOSE INTERCONVERSION BY D-XYLOSE ISOMERASE

Collyer, C.A., Viehmann, H., Goldberg, J.D., Blow, D.M.

(1990) Proc Natl Acad Sci U S A 87: 1362-1366

Released	1993-07-15
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Arthrobacter sp. NRRL B3728
Macromolecule	D-XYLOSE ISOMERASE (protein)
Unique Ligands	MG, NOJ

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1DXI \| pdb_00001dxi	Download File View File

STRUCTURE DETERMINATION OF GLUCOSE ISOMERASE FROM STREPTOMYCES MURINUS AT 2.6 ANGSTROMS RESOLUTION

Rasmussen, H., La Cour, T., Nyborg, J., Schulein, M.

(1994) Acta Crystallogr D Biol Crystallogr 50: 124-131

Released	1994-01-31
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Streptomyces murinus
Macromolecule	D-XYLOSE ISOMERASE (protein)
Unique Ligands	MG

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1HTI \| pdb_00001hti	Download File View File

CRYSTAL STRUCTURE OF RECOMBINANT HUMAN TRIOSEPHOSPHATE ISOMERASE AT 2.8 ANGSTROMS RESOLUTION. TRIOSEPHOSPHATE ISOMERASE RELATED HUMAN GENETIC DISORDERS AND COMPARISON WITH THE TRYPANOSOMAL ENZYME

Mande, S.C., Hol, W.G.J.

(1994) Protein Sci 3: 810-821

Released	1995-01-26
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens
Macromolecule	TRIOSEPHOSPHATE ISOMERASE (protein)
Unique Ligands	PGA

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1MSS \| pdb_00001mss	Download File View File

LARGE SCALE STRUCTURAL REARRANGEMENTS OF THE FRONT LOOPS IN MONOMERISED TRIOSEPHOSPHATE ISOMERASE, AS DEDUCED FROM THE COMPARISON OF THE STRUCTURAL PROPERTIES OF MONOTIM AND ITS POINT MUTATION VARIANT MONOSS

Radha Kishan, K.V., Wierenga, R.K.

(1995) Structure 3: 669-679

Released	1994-09-30
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Trypanosoma brucei brucei
Macromolecule	TRIOSEPHOSPHATE ISOMERASE (protein)

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1TIM \| pdb_00001tim	Download File View File

STRUCTURE OF TRIOSE PHOSPHATE ISOMERASE FROM CHICKEN MUSCLE

Banner, D.W., Bloomer, A.C., Petsko, G.A., Phillips, D.C., Wilson, I.A.

(1976) Biochem Biophys Res Commun 72: 146-155

Released	1976-10-15
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Gallus gallus
Macromolecule	TRIOSEPHOSPHATE ISOMERASE (protein)

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1TMH \| pdb_00001tmh	Download File View File

MODULAR MUTAGENESIS OF A TIM-BARREL ENZYME: THE CRYSTAL STRUCTURE OF A CHIMERIC E. COLI TIM HAVING THE EIGHTH (BETA-ALPHA)-UNIT REPLACED BY THE EQUIVALENT UNIT OF CHICKEN TIM

Radha Kishan, K.V., Zeelen, J.Ph., Wierenga, R.K.

(1994) Protein Eng 7: 945-951

Released	1994-06-22
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Escherichia coli
Macromolecule	TRIOSEPHOSPHATE ISOMERASE (protein)
Unique Ligands	SO4

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1TPB \| pdb_00001tpb	Download File View File

OFFSET OF A CATALYTIC LESION BY A BOUND WATER SOLUBLE

Zhang, Z., Sugio, S., Komives, E.A., Liu, K.D., Knowles, J.R., Petsko, G.A., Ringe, D.

(1995) Biochemistry 34: 13612-13621

Released	1995-02-14
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Gallus gallus
Macromolecule	TRIOSEPHOSPHATE ISOMERASE (protein)
Unique Ligands	PGH

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1TPC \| pdb_00001tpc	Download File View File

OFFSET OF A CATALYTIC LESION BY A BOUND WATER SOLUBLE

Zhang, Z., Sugio, S., Komives, E.A., Liu, K.D., Knowles, J.R., Petsko, G.A., Ringe, D.

(1995) Biochemistry 34: 13612-13621

Released	1995-02-14
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Gallus gallus
Macromolecule	TRIOSEPHOSPHATE ISOMERASE (protein)
Unique Ligands	PGH

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1TPD \| pdb_00001tpd	Download File View File

STRUCTURES OF THE "OPEN" AND "CLOSED" STATE OF TRYPANOSOMAL TRIOSEPHOSPHATE ISOMERASE, AS OBSERVED IN A NEW CRYSTAL FORM: IMPLICATIONS FOR THE REACTION MECHANISM

Noble, M.E.M., Zeelen, J.Ph., Wierenga, R.K.

(1993) Proteins 16: 311-326

Released	1994-05-31
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Trypanosoma brucei brucei
Macromolecule	TRIOSEPHOSPHATE ISOMERASE (protein)

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1TPE \| pdb_00001tpe	Download File View File

COMPARISON OF THE STRUCTURES AND THE CRYSTAL CONTACTS OF TRYPANOSOMAL TRIOSEPHOSPHATE ISOMERASE IN FOUR DIFFERENT CRYSTAL FORMS

Noble, M.E.M., Radha Kishan, K.V., Zeelen, J.Ph., Wierenga, R.K.

(1994) Protein Sci 3: 779-787

Released	1994-05-31
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Trypanosoma brucei brucei
Macromolecule	TRIOSEPHOSPHATE ISOMERASE (protein)

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1TPF \| pdb_00001tpf	Download File View File

COMPARISON OF THE STRUCTURES AND THE CRYSTAL CONTACTS OF TRYPANOSOMAL TRIOSEPHOSPHATE ISOMERASE IN FOUR DIFFERENT CRYSTAL FORMS

Radha Kishan, K.V., Zeelen, J.Ph., Wierenga, R.K.

(1994) Protein Sci 3: 779-787

Released	1994-05-31
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Trypanosoma brucei brucei
Macromolecule	TRIOSEPHOSPHATE ISOMERASE (protein)
Unique Ligands	DMS

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1TPU \| pdb_00001tpu	Download File View File

S96P CHANGE IS A SECOND-SITE SUPPRESSOR FOR H95N SLUGGISH MUTANT TRIOSEPHOSPHATE ISOMERASE

Zhang, Z., Sugio, S., Komives, E.A., Liu, K.D., Stock, A.M., Narayana, N., Xuong, Ng.H., Knowles, J.R., Petsko, G.A., Ringe, D.

(1996) Biochemistry 35: 15474-15484

Released	1995-04-20
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Gallus gallus
Macromolecule	TRIOSEPHOSPHATE ISOMERASE (protein)
Unique Ligands	PGH

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1TPV \| pdb_00001tpv	Download File View File

S96P CHANGE IS A SECOND-SITE SUPPRESSOR FOR H95N SLUGGISH MUTANT TRIOSEPHOSPHATE ISOMERASE

Zhang, Z., Sugio, S., Komives, E.A., Liu, K.D., Stock, A.M., Narayana, N., Xuong, Ng.H., Knowles, J.R., Petsko, G.A., Ringe, D.

(1996) Biochemistry 35: 15474-15484

Released	1995-04-20
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Gallus gallus
Macromolecule	TRIOSEPHOSPHATE ISOMERASE (protein)
Unique Ligands	PGH

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1TPW \| pdb_00001tpw	Download File View File

TRIOSEPHOSPHATE ISOMERASE DRINKS WATER TO KEEP HEALTHY

Zhang, Z., Sugio, S., Komives, E.A., Liu, K.D., Stock, A.M., Narayana, N., Xuong, Ng.H., Knowles, J.R., Petsko, G.A., Ringe, D.

(1999) Biochemistry 38: 4389-4397

Released	1995-04-20
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Gallus gallus
Macromolecule	TRIOSEPHOSPHATE ISOMERASE (protein)
Unique Ligands	PGH

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1TRI \| pdb_00001tri	Download File View File

THE CRYSTAL STRUCTURE OF AN ENGINEERED MONOMERIC TRIOSEPHOSPHATE ISOMERASE, MONOTIM: THE CORRECT MODELLING OF AN EIGHT-RESIDUE LOOP

Wierenga, R.K.

(1993) Structure 1: 205-213

Released	1994-07-31
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Trypanosoma brucei brucei
Macromolecule	TRIOSEPHOSPHATE ISOMERASE (protein)
Unique Ligands	SO4

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1TSI \| pdb_00001tsi	Download File View File

STRUCTURE OF THE COMPLEX BETWEEN TRYPANOSOMAL TRIOSEPHOSPHATE ISOMERASE AND N-HYDROXY-4-PHOSPHONO-BUTANAMIDE: BINDING AT THE ACTIVE SITE DESPITE AN "OPEN" FLEXIBLE LOOP

Verlinde, C.L.M.J.

(1992) Protein Sci 1: 1578-1584

Released	1994-01-31
Method	X-RAY DIFFRACTION 2.84 Å
Organisms	Trypanosoma brucei brucei
Macromolecule	TRIOSEPHOSPHATE ISOMERASE (protein)
Unique Ligands	4PB

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1TTI \| pdb_00001tti	Download File View File

THREE NEW CRYSTAL STRUCTURES OF POINT MUTATION VARIANTS OF MONOTIM: CONFORMATIONAL FLEXIBILITY OF LOOP-1,LOOP-4 AND LOOP-8

Radha Kishan, K.V., Wierenga, R.K.

(1995) Structure 3: 669-679

Released	1995-10-15
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Trypanosoma brucei brucei
Macromolecule	TRIOSEPHOSPHATE ISOMERASE (protein)
Unique Ligands	PGA

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1TTJ \| pdb_00001ttj	Download File View File

THREE NEW CRYSTAL STRUCTURES OF POINT MUTATION VARIANTS OF MONOTIM: CONFORMATIONAL FLEXIBILITY OF LOOP-1,LOOP-4 AND LOOP-8

Radha Kishan, K.V., Wierenga, R.K.

(1995) Structure 3: 669-679

Released	1995-09-15
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Trypanosoma brucei brucei
Macromolecule	TRIOSEPHOSPHATE ISOMERASE (protein)
Unique Ligands	PGH

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1XIA \| pdb_00001xia	Download File View File

COMPARISON OF BACKBONE STRUCTURES OF GLUCOSE ISOMERASE FROM STREPTOMYCES AND ARTHROBACTER

Blow, D.M.

(1987) Protein Eng 1: 467-469

Released	1988-04-16
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Arthrobacter sp. NRRL B3728
Macromolecule	D-XYLOSE ISOMERASE (protein)

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1XIB \| pdb_00001xib	Download File View File

MODES OF BINDING SUBSTRATES AND THEIR ANALOGUES TO THE ENZYME D-XYLOSE ISOMERASE

Carrell, H.L., Glusker, J.P.

(1994) Acta Crystallogr D Biol Crystallogr 50: 113-123

Released	1994-06-22
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Streptomyces rubiginosus
Macromolecule	D-XYLOSE ISOMERASE (protein)
Unique Ligands	MN

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1XIC \| pdb_00001xic	Download File View File

MODES OF BINDING SUBSTRATES AND THEIR ANALOGUES TO THE ENZYME D-XYLOSE ISOMERASE

Carrell, H.L., Glusker, J.P.

(1994) Acta Crystallogr D Biol Crystallogr 50: 113-123

Released	1994-06-22
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Streptomyces rubiginosus
Macromolecule	D-XYLOSE ISOMERASE (protein)
Unique Ligands	MN, XLS

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1XID \| pdb_00001xid	Download File View File

MODES OF BINDING SUBSTRATES AND THEIR ANALOGUES TO THE ENZYME D-XYLOSE ISOMERASE

Carrell, H.L., Glusker, J.P.

(1994) Acta Crystallogr D Biol Crystallogr 50: 113-123

Released	1994-06-22
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Streptomyces rubiginosus
Macromolecule	D-XYLOSE ISOMERASE (protein)
Unique Ligands	ASC, MN

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1XIE \| pdb_00001xie	Download File View File

MODES OF BINDING SUBSTRATES AND THEIR ANALOGUES TO THE ENZYME D-XYLOSE ISOMERASE

Carrell, H.L., Glusker, J.P.

(1994) Acta Crystallogr D Biol Crystallogr 50: 113-123

Released	1994-06-22
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Streptomyces rubiginosus
Macromolecule	D-XYLOSE ISOMERASE (protein)
Unique Ligands	ASO, MN

1 to 25 of 75 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1AG1 | pdb_00001ag1

1DID | pdb_00001did

1DIE | pdb_00001die

1DXI | pdb_00001dxi

1HTI | pdb_00001hti

1MSS | pdb_00001mss

1TIM | pdb_00001tim

1TMH | pdb_00001tmh

1TPB | pdb_00001tpb

1TPC | pdb_00001tpc

1TPD | pdb_00001tpd

1TPE | pdb_00001tpe

1TPF | pdb_00001tpf

1TPU | pdb_00001tpu

1TPV | pdb_00001tpv

1TPW | pdb_00001tpw

1TRI | pdb_00001tri

1TSI | pdb_00001tsi

1TTI | pdb_00001tti

1TTJ | pdb_00001ttj

1XIA | pdb_00001xia

1XIB | pdb_00001xib

1XIC | pdb_00001xic

1XID | pdb_00001xid

1XIE | pdb_00001xie